RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-217ENST00000531637 TMEM63CQ9P1W3 806 aa8.88□□□□□ -0.99
USP33-217ENST00000531637 ERCC5P28715 1186 aaPredicted RBP8.87□□□□□ -0.99
USP33-217ENST00000531637 CCINQ13939 588 aa8.87□□□□□ -0.99
USP33-217ENST00000531637 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP33-217ENST00000531637 RNF34Q969K3 372 aa8.87□□□□□ -0.99
USP33-217ENST00000531637 PNMA5Q96PV4 448 aa8.87□□□□□ -0.99
USP33-217ENST00000531637 ZCCHC2Q9C0B9 1178 aaKnown RBP8.87□□□□□ -0.99
USP33-217ENST00000531637 C12orf49Q9H741 205 aa8.87□□□□□ -0.99
USP33-217ENST00000531637 SENP3-EIF4A1A0A087X0R7 540 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 PHF20L1A8MW92 1017 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 CES1P23141 567 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 ZNF76P36508 570 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 PTSQ03393 145 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 NEUROD1Q13562 356 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 GALNT12Q8IXK2 581 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 PPP4R2Q9NY27 417 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 FAM8A1Q9UBU6 413 aa8.86□□□□□ -0.99
USP33-217ENST00000531637 SLC35F4A4IF30 521 aa8.85□□□□□ -0.99
USP33-217ENST00000531637 KHNYNO15037 678 aaKnown RBP8.85□□□□□ -0.99
USP33-217ENST00000531637 EFSO43281 561 aa8.85□□□□□ -0.99
USP33-217ENST00000531637 EDN3P14138 238 aa8.85□□□□□ -0.99
USP33-217ENST00000531637 AAASQ9NRG9 546 aa8.85□□□□□ -0.99
USP33-217ENST00000531637 PHF24Q9UPV7 400 aa8.85□□□□□ -0.99
USP33-217ENST00000531637 TRAK1Q9UPV9 953 aa8.85□□□□□ -0.99
USP33-217ENST00000531637 GADD45BO75293 160 aaPredicted RBP8.84□□□□□ -0.99
USP33-217ENST00000531637 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
USP33-217ENST00000531637 HDLBPQ00341 1268 aaKnown RBP8.84□□□□□ -0.99
USP33-217ENST00000531637 USPL1Q5W0Q7 1092 aa8.84□□□□□ -0.99
USP33-217ENST00000531637 TRIM22Q8IYM9 498 aa8.84□□□□□ -0.99
USP33-217ENST00000531637 CHRDQ9H2X0 955 aa8.84□□□□□ -0.99
USP33-217ENST00000531637 NPHS2Q9NP85 383 aa8.84□□□□□ -0.99
USP33-217ENST00000531637 MARK1Q9P0L2 795 aa8.84□□□□□ -0.99
USP33-217ENST00000531637 DCDC2BA2VCK2 349 aa8.83□□□□□ -1
USP33-217ENST00000531637 RARAP10276 462 aa8.83□□□□□ -1
USP33-217ENST00000531637 VEGFBP49765 207 aa8.83□□□□□ -1
USP33-217ENST00000531637 FANCCQ00597 558 aa8.83□□□□□ -1
USP33-217ENST00000531637 C1orf127Q8N9H9 656 aa8.83□□□□□ -1
USP33-217ENST00000531637 SUV39H2Q9H5I1 410 aa8.83□□□□□ -1
USP33-217ENST00000531637 RNF19AQ9NV58 838 aa8.83□□□□□ -1
USP33-217ENST00000531637 USP35Q9P2H5 1018 aa8.83□□□□□ -1
USP33-217ENST00000531637 EREGO14944 169 aa8.82□□□□□ -1
USP33-217ENST00000531637 PSAPP07602 524 aa8.82□□□□□ -1
USP33-217ENST00000531637 TNP2Q05952 138 aa8.82□□□□□ -1
USP33-217ENST00000531637 FOXR1Q6PIV2 292 aa8.82□□□□□ -1
USP33-217ENST00000531637 CCDC155Q8N6L0 562 aa8.82□□□□□ -1
USP33-217ENST00000531637 EPS8L3Q8TE67 593 aaKnown RBP8.82□□□□□ -1
USP33-217ENST00000531637 GSX2Q9BZM3 304 aa8.82□□□□□ -1
USP33-217ENST00000531637 ATXN7L1Q9ULK2 861 aaPredicted RBP8.82□□□□□ -1
USP33-217ENST00000531637 ST8SIA5O15466 376 aa8.81□□□□□ -1
USP33-217ENST00000531637 SASH3O75995 380 aa8.81□□□□□ -1
USP33-217ENST00000531637 MAPTP10636 758 aaKnown RBP8.81□□□□□ -1
USP33-217ENST00000531637 SOX18P35713 384 aa8.81□□□□□ -1
USP33-217ENST00000531637 ST13P50502 369 aaKnown RBP8.81□□□□□ -1
USP33-217ENST00000531637 SFSWAPQ12872 951 aaKnown RBP8.81□□□□□ -1
USP33-217ENST00000531637 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
USP33-217ENST00000531637 LDLRAD1Q5T700 205 aa8.81□□□□□ -1
USP33-217ENST00000531637 NT5DC4Q86YG4 428 aa8.81□□□□□ -1
USP33-217ENST00000531637 OR13H1Q8NG92 308 aa8.81□□□□□ -1
USP33-217ENST00000531637 TGIF2Q9GZN2 237 aa8.81□□□□□ -1
USP33-217ENST00000531637 CCSER2Q9H7U1 834 aa8.81□□□□□ -1
USP33-217ENST00000531637 CNTN3Q9P232 1028 aa8.81□□□□□ -1
USP33-217ENST00000531637 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.81□□□□□ -1
USP33-217ENST00000531637 MAP3K6O95382 1288 aa8.8□□□□□ -1
USP33-217ENST00000531637 GSTT1P30711 240 aa8.8□□□□□ -1
USP33-217ENST00000531637 IRS1P35568 1242 aa8.8□□□□□ -1
USP33-217ENST00000531637 SPEM2Q0P670 501 aa8.8□□□□□ -1
USP33-217ENST00000531637 KIAA0319Q5VV43 1072 aa8.8□□□□□ -1
USP33-217ENST00000531637 HS2ST1Q7LGA3 356 aa8.8□□□□□ -1
USP33-217ENST00000531637 SREK1Q8WXA9 508 aaKnown RBP8.8□□□□□ -1
USP33-217ENST00000531637 TRERF1Q96PN7 1200 aa8.8□□□□□ -1
USP33-217ENST00000531637 BCO2Q9BYV7 579 aa8.8□□□□□ -1
USP33-217ENST00000531637 POLR3DP05423 398 aaPredicted RBP8.79□□□□□ -1
USP33-217ENST00000531637 USP17L7P0C7H9 530 aa8.79□□□□□ -1
USP33-217ENST00000531637 XRCC5P13010 732 aaKnown RBP8.79□□□□□ -1
USP33-217ENST00000531637 NFKB1P19838 968 aa8.79□□□□□ -1
USP33-217ENST00000531637 PLAURQ03405 335 aa8.79□□□□□ -1
USP33-217ENST00000531637 HYAL2Q12891 473 aa8.79□□□□□ -1
USP33-217ENST00000531637 GNL2Q13823 731 aaKnown RBP8.79□□□□□ -1
USP33-217ENST00000531637 TAF1CQ15572 869 aaPredicted RBP8.79□□□□□ -1
USP33-217ENST00000531637 FAM182BQ5T319 152 aa8.79□□□□□ -1
USP33-217ENST00000531637 PI16Q6UXB8 463 aa8.79□□□□□ -1
USP33-217ENST00000531637 KRT25Q7Z3Z0 450 aa8.79□□□□□ -1
USP33-217ENST00000531637 TRIM47Q96LD4 638 aa8.79□□□□□ -1
USP33-217ENST00000531637 OSBPL7Q9BZF2 842 aa8.79□□□□□ -1
USP33-217ENST00000531637 EHD4Q9H223 541 aa8.79□□□□□ -1
USP33-217ENST00000531637 ZFYVE1Q9HBF4 777 aa8.79□□□□□ -1
USP33-217ENST00000531637 SOBPA7XYQ1 873 aa8.78□□□□□ -1
USP33-217ENST00000531637 MMP20O60882 483 aa8.78□□□□□ -1
USP33-217ENST00000531637 IGSF3O75054 1194 aa8.78□□□□□ -1
USP33-217ENST00000531637 CTSHP09668 335 aa8.78□□□□□ -1
USP33-217ENST00000531637 HOXD8P13378 290 aaPredicted RBP8.78□□□□□ -1
USP33-217ENST00000531637 ITGA6P23229 1130 aa8.78□□□□□ -1
USP33-217ENST00000531637 UBAP2LQ14157 1087 aaKnown RBP8.78□□□□□ -1
USP33-217ENST00000531637 NAALADL2Q58DX5 795 aa8.78□□□□□ -1
USP33-217ENST00000531637 METTL16Q86W50 562 aaKnown RBP8.78□□□□□ -1
USP33-217ENST00000531637 NCAPG2Q86XI2 1143 aa8.78□□□□□ -1
USP33-217ENST00000531637 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
USP33-217ENST00000531637 TLR7Q9NYK1 1049 aaKnown RBP8.78□□□□□ -1
USP33-217ENST00000531637 USP31Q70CQ4 1352 aa8.77□□□□□ -1.01
USP33-217ENST00000531637 BNIP3LO60238 219 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms