RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-217ENST00000531637 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
USP33-217ENST00000531637 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
USP33-217ENST00000531637 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
USP33-217ENST00000531637 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
USP33-217ENST00000531637 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
USP33-217ENST00000531637 FOXD1Q16676 465 aa18.05■□□□□ 0.48
USP33-217ENST00000531637 ADRA2BP18089 450 aa17.8■□□□□ 0.44
USP33-217ENST00000531637 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
USP33-217ENST00000531637 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
USP33-217ENST00000531637 KCNA4P22459 653 aa17.12■□□□□ 0.33
USP33-217ENST00000531637 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
USP33-217ENST00000531637 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
USP33-217ENST00000531637 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
USP33-217ENST00000531637 MSH5O43196 834 aa16.59■□□□□ 0.25
USP33-217ENST00000531637 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
USP33-217ENST00000531637 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
USP33-217ENST00000531637 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
USP33-217ENST00000531637 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
USP33-217ENST00000531637 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
USP33-217ENST00000531637 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
USP33-217ENST00000531637 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
USP33-217ENST00000531637 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
USP33-217ENST00000531637 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
USP33-217ENST00000531637 ZBTB22O15209 634 aa15.7■□□□□ 0.1
USP33-217ENST00000531637 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
USP33-217ENST00000531637 HOXD11P31277 338 aaPredicted RBP15.65■□□□□ 0.1
USP33-217ENST00000531637 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
USP33-217ENST00000531637 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
USP33-217ENST00000531637 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
USP33-217ENST00000531637 ATXN8OSP0DMR3 200 aa15.16■□□□□ 0.02
USP33-217ENST00000531637 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
USP33-217ENST00000531637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
USP33-217ENST00000531637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
USP33-217ENST00000531637 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
USP33-217ENST00000531637 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
USP33-217ENST00000531637 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
USP33-217ENST00000531637 APLP2Q06481 763 aa14.67□□□□□ -0.06
USP33-217ENST00000531637 FKBP8Q14318 412 aa14.61□□□□□ -0.07
USP33-217ENST00000531637 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
USP33-217ENST00000531637 AMER1Q5JTC6 1135 aaPredicted RBP14.44□□□□□ -0.1
USP33-217ENST00000531637 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
USP33-217ENST00000531637 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
USP33-217ENST00000531637 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
USP33-217ENST00000531637 FBLN2P98095 1184 aa14.16□□□□□ -0.14
USP33-217ENST00000531637 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
USP33-217ENST00000531637 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
USP33-217ENST00000531637 CAPN15O75808 1086 aa14.09□□□□□ -0.15
USP33-217ENST00000531637 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
USP33-217ENST00000531637 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
USP33-217ENST00000531637 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
USP33-217ENST00000531637 POLA2Q14181 598 aa14.02□□□□□ -0.17
USP33-217ENST00000531637 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
USP33-217ENST00000531637 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
USP33-217ENST00000531637 SLC24A1O60721 1099 aa13.93□□□□□ -0.18
USP33-217ENST00000531637 PROM2Q8N271 834 aa13.91□□□□□ -0.18
USP33-217ENST00000531637 ABCB7O75027 752 aa13.8□□□□□ -0.2
USP33-217ENST00000531637 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
USP33-217ENST00000531637 DSG3P32926 999 aa13.66□□□□□ -0.22
USP33-217ENST00000531637 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
USP33-217ENST00000531637 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
USP33-217ENST00000531637 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
USP33-217ENST00000531637 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
USP33-217ENST00000531637 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
USP33-217ENST00000531637 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
USP33-217ENST00000531637 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
USP33-217ENST00000531637 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
USP33-217ENST00000531637 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
USP33-217ENST00000531637 CACNB1Q02641 598 aaPredicted RBP13.41□□□□□ -0.26
USP33-217ENST00000531637 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP33-217ENST00000531637 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
USP33-217ENST00000531637 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
USP33-217ENST00000531637 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
USP33-217ENST00000531637 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
USP33-217ENST00000531637 PKD2Q13563 968 aa13.31□□□□□ -0.28
USP33-217ENST00000531637 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
USP33-217ENST00000531637 MIER1Q8N108 512 aa13.29□□□□□ -0.28
USP33-217ENST00000531637 PLCB2Q00722 1185 aa13.27□□□□□ -0.29
USP33-217ENST00000531637 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.29
USP33-217ENST00000531637 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
USP33-217ENST00000531637 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
USP33-217ENST00000531637 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.1□□□□□ -0.31
USP33-217ENST00000531637 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
USP33-217ENST00000531637 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
USP33-217ENST00000531637 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
USP33-217ENST00000531637 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
USP33-217ENST00000531637 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
USP33-217ENST00000531637 GSE1Q14687 1217 aa12.99□□□□□ -0.33
USP33-217ENST00000531637 RGL2O15211 777 aa12.98□□□□□ -0.33
USP33-217ENST00000531637 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
USP33-217ENST00000531637 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
USP33-217ENST00000531637 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
USP33-217ENST00000531637 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
USP33-217ENST00000531637 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP33-217ENST00000531637 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
USP33-217ENST00000531637 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
USP33-217ENST00000531637 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
USP33-217ENST00000531637 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
USP33-217ENST00000531637 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
USP33-217ENST00000531637 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
USP33-217ENST00000531637 NUBP1P53384 320 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms