RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 CIAPIN1Q6FI81 312 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 CYP4F22Q6NT55 531 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 DPP8Q6V1X1 898 aaPredicted RBP9.81□□□□□ -0.84
NUP98-217ENST00000530345 TTLL7Q6ZT98 887 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 CDC37L1Q7L3B6 337 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 SP8Q8IXZ3 490 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 RRP7AQ9Y3A4 280 aaKnown RBP9.81□□□□□ -0.84
NUP98-217ENST00000530345 ABCC4O15439 1325 aa9.81□□□□□ -0.84
NUP98-217ENST00000530345 MYL6BP14649 208 aa9.8□□□□□ -0.84
NUP98-217ENST00000530345 CXCL9Q07325 125 aa9.8□□□□□ -0.84
NUP98-217ENST00000530345 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
NUP98-217ENST00000530345 MPNDQ8N594 471 aa9.8□□□□□ -0.84
NUP98-217ENST00000530345 NGEFQ8N5V2 710 aa9.8□□□□□ -0.84
NUP98-217ENST00000530345 BCL2L13Q9BXK5 485 aa9.8□□□□□ -0.84
NUP98-217ENST00000530345 ZNF609O15014 1411 aa9.8□□□□□ -0.84
NUP98-217ENST00000530345 SH3TC1Q8TE82 1336 aa9.8□□□□□ -0.84
NUP98-217ENST00000530345 PAPPA2Q9BXP8 1791 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 H7C1D1 291 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 TRAF5O00463 557 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 RPS12P25398 132 aaKnown RBP9.79□□□□□ -0.84
NUP98-217ENST00000530345 GMPSP49915 693 aaPredicted RBP9.79□□□□□ -0.84
NUP98-217ENST00000530345 GRAPQ13588 217 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 CNGB1Q14028 1251 aaPredicted RBP9.79□□□□□ -0.84
NUP98-217ENST00000530345 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
NUP98-217ENST00000530345 GRAPLQ8TC17 118 aaPredicted RBP9.79□□□□□ -0.84
NUP98-217ENST00000530345 DPF2Q92785 391 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 PLEKHF1Q96S99 279 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 SAGE1Q9NXZ1 904 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 MIS18AQ9NYP9 233 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 TSPYL4Q9UJ04 414 aa9.79□□□□□ -0.84
NUP98-217ENST00000530345 LAMB1P07942 1786 aa9.78□□□□□ -0.84
NUP98-217ENST00000530345 CCDC85CA6NKD9 419 aa9.78□□□□□ -0.84
NUP98-217ENST00000530345 HSP90B1P14625 803 aaKnown RBP9.78□□□□□ -0.84
NUP98-217ENST00000530345 LRP10Q7Z4F1 713 aa9.78□□□□□ -0.84
NUP98-217ENST00000530345 ECM29Q5VYK3 1845 aa9.77□□□□□ -0.84
NUP98-217ENST00000530345 HOXB7P09629 217 aa9.77□□□□□ -0.85
NUP98-217ENST00000530345 GRM1Q13255 1194 aa9.77□□□□□ -0.85
NUP98-217ENST00000530345 PPP4R3CPQ6ZMV5 832 aa9.77□□□□□ -0.85
NUP98-217ENST00000530345 NLRP10Q86W26 655 aa9.77□□□□□ -0.85
NUP98-217ENST00000530345 CCDC102AQ96A19 550 aa9.77□□□□□ -0.85
NUP98-217ENST00000530345 GLIS2Q9BZE0 524 aaPredicted RBP9.77□□□□□ -0.85
NUP98-217ENST00000530345 CNOT7Q9UIV1 285 aaKnown RBP9.77□□□□□ -0.85
NUP98-217ENST00000530345 AOC2O75106 756 aa9.76□□□□□ -0.85
NUP98-217ENST00000530345 TCIRG1Q13488 830 aa9.76□□□□□ -0.85
NUP98-217ENST00000530345 PDIA6Q15084 440 aa9.76□□□□□ -0.85
NUP98-217ENST00000530345 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
NUP98-217ENST00000530345 NECTIN2Q92692 538 aa9.76□□□□□ -0.85
NUP98-217ENST00000530345 EYA3Q99504 573 aa9.76□□□□□ -0.85
NUP98-217ENST00000530345 MCOLN1Q9GZU1 580 aa9.76□□□□□ -0.85
NUP98-217ENST00000530345 TRMT112Q9UI30 125 aaKnown RBP9.76□□□□□ -0.85
NUP98-217ENST00000530345 SPEF2Q9C093 1822 aa9.76□□□□□ -0.85
NUP98-217ENST00000530345 KIAA0100Q14667 2235 aaKnown RBP9.75□□□□□ -0.85
NUP98-217ENST00000530345 TCERG1O14776 1098 aaKnown RBP9.75□□□□□ -0.85
NUP98-217ENST00000530345 RAD17O75943 681 aa9.75□□□□□ -0.85
NUP98-217ENST00000530345 HUNKP57058 714 aa9.75□□□□□ -0.85
NUP98-217ENST00000530345 DGKZQ13574 1117 aa9.75□□□□□ -0.85
NUP98-217ENST00000530345 MICALL2Q8IY33 904 aa9.75□□□□□ -0.85
NUP98-217ENST00000530345 C2orf69Q8N8R5 385 aa9.75□□□□□ -0.85
NUP98-217ENST00000530345 ZNF646O15015 1829 aaPredicted RBP9.75□□□□□ -0.85
NUP98-217ENST00000530345 RBBP6Q7Z6E9 1792 aaKnown RBP9.74□□□□□ -0.85
NUP98-217ENST00000530345 FKBP1BP68106 108 aa9.74□□□□□ -0.85
NUP98-217ENST00000530345 FMR1Q06787 632 aaKnown RBP eCLIP9.74□□□□□ -0.854e-6■■■■□ 21.6
NUP98-217ENST00000530345 SF3B3Q15393 1217 aaKnown RBP9.74□□□□□ -0.85
NUP98-217ENST00000530345 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
NUP98-217ENST00000530345 RGMBQ6NW40 437 aa9.74□□□□□ -0.85
NUP98-217ENST00000530345 KRT26Q7Z3Y9 468 aa9.74□□□□□ -0.85
NUP98-217ENST00000530345 TRPM4Q8TD43 1214 aa9.74□□□□□ -0.85
NUP98-217ENST00000530345 DCPSQ96C86 337 aaKnown RBP9.74□□□□□ -0.85
NUP98-217ENST00000530345 ZNF408Q9H9D4 720 aa9.74□□□□□ -0.85
NUP98-217ENST00000530345 GBA2Q9HCG7 927 aaPredicted RBP9.74□□□□□ -0.85
NUP98-217ENST00000530345 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
NUP98-217ENST00000530345 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
NUP98-217ENST00000530345 EIF2S2P20042 333 aaKnown RBP9.73□□□□□ -0.85
NUP98-217ENST00000530345 HIRAP54198 1017 aaPredicted RBP9.73□□□□□ -0.85
NUP98-217ENST00000530345 COPS6Q7L5N1 327 aa9.73□□□□□ -0.85
NUP98-217ENST00000530345 SULF1Q8IWU6 871 aa9.73□□□□□ -0.85
NUP98-217ENST00000530345 PLBD2Q8NHP8 589 aa9.73□□□□□ -0.85
NUP98-217ENST00000530345 XAGE3Q8WTP9 111 aa9.73□□□□□ -0.85
NUP98-217ENST00000530345 THUMPD2Q9BTF0 503 aaKnown RBP9.73□□□□□ -0.85
NUP98-217ENST00000530345 PSMD14O00487 310 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 MMP14P50281 582 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 RIPK4P57078 832 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 TRIM28Q13263 835 aaKnown RBP9.72□□□□□ -0.85
NUP98-217ENST00000530345 PROSER3Q2NL68 480 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 CHMP4AQ9BY43 222 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 PODXL2Q9NZ53 605 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 DBF4Q9UBU7 674 aaPredicted RBP9.72□□□□□ -0.85
NUP98-217ENST00000530345 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 PITPNM2Q9BZ72 1349 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 CEP290O15078 2479 aa9.72□□□□□ -0.85
NUP98-217ENST00000530345 FAM155AB1AL88 458 aaPredicted RBP9.71□□□□□ -0.86
NUP98-217ENST00000530345 ECE2O60344 883 aa9.71□□□□□ -0.86
NUP98-217ENST00000530345 SLC10A3P09131 477 aa9.71□□□□□ -0.86
NUP98-217ENST00000530345 TMPOP42166 694 aaKnown RBP9.71□□□□□ -0.86
NUP98-217ENST00000530345 ZNF157P51786 506 aaPredicted RBP9.71□□□□□ -0.86
NUP98-217ENST00000530345 RALBP1Q15311 655 aa9.71□□□□□ -0.86
NUP98-217ENST00000530345 PKN2Q16513 984 aaKnown RBP9.71□□□□□ -0.86
NUP98-217ENST00000530345 KIF4BQ2VIQ3 1234 aa9.71□□□□□ -0.86
NUP98-217ENST00000530345 USP48Q86UV5 1035 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms