RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
AMBRA1-209ENST00000529963 TREML1Q86YW5 311 aa8.22□□□□□ -1.09
AMBRA1-209ENST00000529963 GLYCTKQ8IVS8 523 aa8.22□□□□□ -1.09
AMBRA1-209ENST00000529963 FANCAO15360 1455 aa8.22□□□□□ -1.09
AMBRA1-209ENST00000529963 ARHGEF40Q8TER5 1519 aa8.21□□□□□ -1.09
AMBRA1-209ENST00000529963 DCDC2BA2VCK2 349 aa8.21□□□□□ -1.1
AMBRA1-209ENST00000529963 BRD2P25440 801 aaKnown RBP8.21□□□□□ -1.1
AMBRA1-209ENST00000529963 UBAP2LQ14157 1087 aaKnown RBP8.21□□□□□ -1.1
AMBRA1-209ENST00000529963 BIN2Q9UBW5 565 aaPredicted RBP8.21□□□□□ -1.1
AMBRA1-209ENST00000529963 IQSEC2Q5JU85 1478 aa8.21□□□□□ -1.1
AMBRA1-209ENST00000529963 RIMS1Q86UR5 1692 aaKnown RBP8.21□□□□□ -1.1
AMBRA1-209ENST00000529963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.21□□□□□ -1.1
AMBRA1-209ENST00000529963 H7C1W4 665 aa8.2□□□□□ -1.1
AMBRA1-209ENST00000529963 MICAL2O94851 1124 aa8.2□□□□□ -1.1
AMBRA1-209ENST00000529963 BTLAQ7Z6A9 289 aa8.2□□□□□ -1.1
AMBRA1-209ENST00000529963 CEP63Q96MT8 703 aa8.2□□□□□ -1.1
AMBRA1-209ENST00000529963 ANKIB1Q9P2G1 1089 aa8.2□□□□□ -1.1
AMBRA1-209ENST00000529963 EGFL7Q9UHF1 273 aa8.2□□□□□ -1.1
AMBRA1-209ENST00000529963 POGZQ7Z3K3 1410 aa8.2□□□□□ -1.1
AMBRA1-209ENST00000529963 PATL2C9JE40 543 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 TGFBR3LH3BV60 316 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 EIF1AXP47813 144 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 ECM1Q16610 540 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 NLRP8Q86W28 1048 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 ABHD17AQ96GS6 310 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 DMGDHQ9UI17 866 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 HCN2Q9UL51 889 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 TTC37Q6PGP7 1564 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 RICTORQ6R327 1708 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 CDK13Q14004 1512 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 ZMYM4Q5VZL5 1548 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 KHNYNO15037 678 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 ATXN7O15265 892 aaPredicted RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 BNIP3LO60238 219 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 IDH3AP50213 366 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 SF3B2Q13435 895 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 AAMPQ13685 434 aa8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 GPR161Q8N6U8 529 aaKnown RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 GPC6Q9Y625 555 aaPredicted RBP8.19□□□□□ -1.1
AMBRA1-209ENST00000529963 FMN1Q68DA7 1419 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 YEATS2Q9ULM3 1422 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 MAGI2Q86UL8 1455 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 ZFYVE16Q7Z3T8 1539 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 H3BM21 787 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 TERTO14746 1132 aaKnown RBP8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 OPLAHO14841 1288 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 ZAP70P43403 619 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 TYRO3Q06418 890 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 GRIN2CQ14957 1233 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 NOM1Q5C9Z4 860 aaKnown RBP8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 STRN4Q9NRL3 753 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 CDK11AQ9UQ88 783 aaPredicted RBP8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 PCDHGC4Q9Y5F7 938 aa8.18□□□□□ -1.1
AMBRA1-209ENST00000529963 PLCH2O75038 1416 aa8.17□□□□□ -1.1
AMBRA1-209ENST00000529963 SFSWAPQ12872 951 aaKnown RBP8.17□□□□□ -1.1
AMBRA1-209ENST00000529963 HIF1AQ16665 826 aa8.17□□□□□ -1.1
AMBRA1-209ENST00000529963 RGL4Q8IZJ4 473 aa8.17□□□□□ -1.1
AMBRA1-209ENST00000529963 GPR152Q8TDT2 470 aa8.17□□□□□ -1.1
AMBRA1-209ENST00000529963 BRD7Q9NPI1 651 aa8.17□□□□□ -1.1
AMBRA1-209ENST00000529963 HECW1Q76N89 1606 aa8.17□□□□□ -1.1
AMBRA1-209ENST00000529963 ERBB4Q15303 1308 aa8.17□□□□□ -1.1
AMBRA1-209ENST00000529963 SCAPERQ9BY12 1400 aa8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 FAM13AO94988 1023 aa8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 MAPTP10636 758 aaKnown RBP8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 GRNP28799 593 aaKnown RBP8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 ARHGAP4P98171 946 aa8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 DNM1Q05193 864 aaKnown RBP8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 LBRQ14739 615 aaKnown RBP8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 EFCAB2Q5VUJ9 269 aa8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 FIGNL1Q6PIW4 674 aa8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 ABTB2Q8N961 1025 aa8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 CCDC87Q9NVE4 849 aa8.16□□□□□ -1.1
AMBRA1-209ENST00000529963 NPR3P17342 541 aa8.15□□□□□ -1.1
AMBRA1-209ENST00000529963 CD33P20138 364 aa8.15□□□□□ -1.1
AMBRA1-209ENST00000529963 INPP5BP32019 993 aa8.15□□□□□ -1.1
AMBRA1-209ENST00000529963 TNP2Q05952 138 aa8.15□□□□□ -1.1
AMBRA1-209ENST00000529963 IER5Q5VY09 327 aa8.15□□□□□ -1.1
AMBRA1-209ENST00000529963 NANOS1Q8WY41 292 aaKnown RBP8.15□□□□□ -1.1
AMBRA1-209ENST00000529963 NDFIP2Q9NV92 336 aa8.15□□□□□ -1.1
AMBRA1-209ENST00000529963 ARHGAP35Q9NRY4 1499 aa8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 MLECQ14165 292 aa8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 SAMD5Q5TGI4 173 aa8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 SND1Q7KZF4 910 aaKnown RBP eCLIP8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 CMTR1Q8N1G2 835 aaKnown RBP8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 EDEM1Q92611 657 aa8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 PODXL2Q9NZ53 605 aa8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 PREX1Q8TCU6 1659 aa8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 CLIP1P30622 1438 aa8.14□□□□□ -1.11
AMBRA1-209ENST00000529963 FZD6O60353 706 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 FAM157BP0CG42 384 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 ARSDP51689 593 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 POLIQ9UNA4 740 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 PTPRTO14522 1441 aa8.13□□□□□ -1.11
AMBRA1-209ENST00000529963 TROQ12816 1431 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms