RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SAP130Q9H0E3 1048 aa8.68□□□□□ -1.02
CSDE1-212ENST00000529046 M0R082 166 aa8.67□□□□□ -1.02
CSDE1-212ENST00000529046 ALBP02768 609 aa8.67□□□□□ -1.02
CSDE1-212ENST00000529046 ZNF417Q8TAU3 575 aa8.67□□□□□ -1.02
CSDE1-212ENST00000529046 ZNF587Q96SQ5 575 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-212ENST00000529046 C11orf16Q9NQ32 467 aa8.67□□□□□ -1.02
CSDE1-212ENST00000529046 STARD13Q9Y3M8 1113 aa8.67□□□□□ -1.02
CSDE1-212ENST00000529046 BRD2P25440 801 aaKnown RBP8.66□□□□□ -1.02
CSDE1-212ENST00000529046 NAA30Q147X3 362 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-212ENST00000529046 CAPN12Q6ZSI9 719 aa8.66□□□□□ -1.02
CSDE1-212ENST00000529046 KRT25Q7Z3Z0 450 aa8.66□□□□□ -1.02
CSDE1-212ENST00000529046 TRIM11Q96F44 468 aa8.66□□□□□ -1.02
CSDE1-212ENST00000529046 SLC6A14Q9UN76 642 aa8.66□□□□□ -1.02
CSDE1-212ENST00000529046 RTCBQ9Y3I0 505 aaKnown RBP8.66□□□□□ -1.02
CSDE1-212ENST00000529046 KRBA1A5PL33 1030 aa8.65□□□□□ -1.02
CSDE1-212ENST00000529046 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.02
CSDE1-212ENST00000529046 OPLAHO14841 1288 aa8.65□□□□□ -1.02
CSDE1-212ENST00000529046 ETFBKMTQ8IXQ9 262 aa8.65□□□□□ -1.02
CSDE1-212ENST00000529046 RGL4Q8IZJ4 473 aa8.65□□□□□ -1.02
CSDE1-212ENST00000529046 MICALL1Q8N3F8 863 aa8.65□□□□□ -1.02
CSDE1-212ENST00000529046 PLVAPQ9BX97 442 aa8.65□□□□□ -1.02
CSDE1-212ENST00000529046 DNAJB12Q9NXW2 375 aaKnown RBP8.65□□□□□ -1.02
CSDE1-212ENST00000529046 USP20Q9Y2K6 914 aa8.65□□□□□ -1.02
CSDE1-212ENST00000529046 RARAP10276 462 aa8.64□□□□□ -1.03
CSDE1-212ENST00000529046 ARID4AP29374 1257 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-212ENST00000529046 PRDM6Q9NQX0 595 aa8.64□□□□□ -1.03
CSDE1-212ENST00000529046 SPDYE3A6NKU9 549 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 TNFRSF10BO14763 440 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 MSTNO14793 375 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 SASH3O75995 380 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 MAP3K6O95382 1288 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 ITGB2P05107 769 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 SCNN1AP37088 669 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 C20orf204Q6ZNR8 217 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 C8orf86Q6ZUL3 223 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 CMTR1Q8N1G2 835 aaKnown RBP8.63□□□□□ -1.03
CSDE1-212ENST00000529046 ZFATQ9P243 1243 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 EGFL7Q9UHF1 273 aa8.63□□□□□ -1.03
CSDE1-212ENST00000529046 XYLBO75191 536 aa8.62□□□□□ -1.03
CSDE1-212ENST00000529046 NPR3P17342 541 aa8.62□□□□□ -1.03
CSDE1-212ENST00000529046 TARSP26639 723 aaKnown RBP8.62□□□□□ -1.03
CSDE1-212ENST00000529046 PCSK7Q16549 785 aa8.62□□□□□ -1.03
CSDE1-212ENST00000529046 DHX32Q7L7V1 743 aaKnown RBP8.62□□□□□ -1.03
CSDE1-212ENST00000529046 LILRB5O75023 590 aa8.61□□□□□ -1.03
CSDE1-212ENST00000529046 EGFRP00533 1210 aa8.61□□□□□ -1.03
CSDE1-212ENST00000529046 FAM26DQ5JW98 314 aa8.61□□□□□ -1.03
CSDE1-212ENST00000529046 SPOCK3Q9BQ16 436 aa8.61□□□□□ -1.03
CSDE1-212ENST00000529046 JPH1Q9HDC5 661 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-212ENST00000529046 FAM13BQ9NYF5 915 aa8.61□□□□□ -1.03
CSDE1-212ENST00000529046 SEPT3Q9UH03 358 aa8.61□□□□□ -1.03
CSDE1-212ENST00000529046 NAGPAQ9UK23 515 aa8.61□□□□□ -1.03
CSDE1-212ENST00000529046 SPATA31C1P0DKV0 1188 aa8.6□□□□□ -1.03
CSDE1-212ENST00000529046 NID1P14543 1247 aa8.6□□□□□ -1.03
CSDE1-212ENST00000529046 COL9A3Q14050 684 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-212ENST00000529046 PSAPL1Q6NUJ1 521 aa8.6□□□□□ -1.03
CSDE1-212ENST00000529046 FAM35AQ86V20 835 aa8.6□□□□□ -1.03
CSDE1-212ENST00000529046 ABTB2Q8N961 1025 aa8.6□□□□□ -1.03
CSDE1-212ENST00000529046 NUDT8Q8WV74 236 aa8.6□□□□□ -1.03
CSDE1-212ENST00000529046 STIM2Q9P246 746 aa8.6□□□□□ -1.03
CSDE1-212ENST00000529046 KCNMB2Q9Y691 235 aa8.6□□□□□ -1.03
CSDE1-212ENST00000529046 CPB1P15086 417 aa8.59□□□□□ -1.03
CSDE1-212ENST00000529046 GPLD1P80108 840 aa8.59□□□□□ -1.03
CSDE1-212ENST00000529046 ECM1Q16610 540 aa8.59□□□□□ -1.03
CSDE1-212ENST00000529046 PRRT3Q5FWE3 981 aa8.59□□□□□ -1.03
CSDE1-212ENST00000529046 CCER1Q8TC90 406 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-212ENST00000529046 TRPM4Q8TD43 1214 aa8.59□□□□□ -1.03
CSDE1-212ENST00000529046 HELQQ8TDG4 1101 aa8.59□□□□□ -1.03
CSDE1-212ENST00000529046 MTMR7Q9Y216 660 aa8.59□□□□□ -1.03
CSDE1-212ENST00000529046 SCRIBQ14160 1630 aa8.58□□□□□ -1.04
CSDE1-212ENST00000529046 PROCP04070 461 aa8.58□□□□□ -1.04
CSDE1-212ENST00000529046 ZAP70P43403 619 aa8.58□□□□□ -1.04
CSDE1-212ENST00000529046 GTF3C2Q8WUA4 911 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-212ENST00000529046 PIK3R5Q8WYR1 880 aa8.58□□□□□ -1.04
CSDE1-212ENST00000529046 CC2D2AQ9P2K1 1620 aa8.58□□□□□ -1.04
CSDE1-212ENST00000529046 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
CSDE1-212ENST00000529046 EIF4G1Q04637 1599 aaKnown RBP8.57□□□□□ -1.04
CSDE1-212ENST00000529046 RGS9O75916 674 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-212ENST00000529046 SERPINB4P48594 390 aa8.57□□□□□ -1.04
CSDE1-212ENST00000529046 MLLT1Q03111 559 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-212ENST00000529046 TRIP4Q15650 581 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-212ENST00000529046 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
CSDE1-212ENST00000529046 TLR7Q9NYK1 1049 aaKnown RBP8.57□□□□□ -1.04
CSDE1-212ENST00000529046 C1QTNF9BB2RNN3 333 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 ZBTB42B2RXF5 422 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 PSAPP07602 524 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 CHRNA4P43681 627 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 NRLP54845 237 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
CSDE1-212ENST00000529046 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
CSDE1-212ENST00000529046 TRAPPC3LQ5T215 181 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 XP32Q5T750 250 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 CD163Q86VB7 1156 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 NLRP13Q86W25 1043 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 FRRS1LQ9P0K9 344 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 IVNS1ABPQ9Y6Y0 642 aa8.56□□□□□ -1.04
CSDE1-212ENST00000529046 SOWAHDA6NJG2 315 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 UBAP1LF5GYI3 381 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 FAM229AH3BQW9 127 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 ZBTB39O15060 712 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 ICMTO60725 284 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms