RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 KIAA2012Q0VF49 1180 aa23.67■■□□□ 1.38
LTBP3-211ENST00000528966 USP48Q86UV5 1035 aa23.67■■□□□ 1.38
LTBP3-211ENST00000528966 NLRP3Q96P20 1036 aa23.67■■□□□ 1.38
LTBP3-211ENST00000528966 CNOT7Q9UIV1 285 aaKnown RBP23.67■■□□□ 1.38
LTBP3-211ENST00000528966 AKAP11Q9UKA4 1901 aa23.67■■□□□ 1.38
LTBP3-211ENST00000528966 TNIP1Q15025 636 aa23.66■■□□□ 1.38
LTBP3-211ENST00000528966 DPP8Q6V1X1 898 aaPredicted RBP23.66■■□□□ 1.38
LTBP3-211ENST00000528966 GIGYF2Q6Y7W6 1299 aaKnown RBP23.66■■□□□ 1.38
LTBP3-211ENST00000528966 CFAP53Q96M91 514 aa23.66■■□□□ 1.38
LTBP3-211ENST00000528966 SAGE1Q9NXZ1 904 aa23.66■■□□□ 1.38
LTBP3-211ENST00000528966 DLG5Q8TDM6 1919 aa23.66■■□□□ 1.38
LTBP3-211ENST00000528966 YDJCA8MPS7 323 aa23.65■■□□□ 1.38
LTBP3-211ENST00000528966 PPP1R42Q7Z4L9 355 aa23.65■■□□□ 1.38
LTBP3-211ENST00000528966 NUDCQ9Y266 331 aa23.65■■□□□ 1.38
LTBP3-211ENST00000528966 ANKRD36CQ5JPF3 1778 aa23.65■■□□□ 1.38
LTBP3-211ENST00000528966 DUOX1Q9NRD9 1551 aa23.65■■□□□ 1.38
LTBP3-211ENST00000528966 TAF1P21675 1872 aa23.64■■□□□ 1.38
LTBP3-211ENST00000528966 SLC10A5Q5PT55 438 aa23.64■■□□□ 1.37
LTBP3-211ENST00000528966 RGMBQ6NW40 437 aa23.64■■□□□ 1.37
LTBP3-211ENST00000528966 MICALL2Q8IY33 904 aa23.64■■□□□ 1.37
LTBP3-211ENST00000528966 MPNDQ8N594 471 aa23.64■■□□□ 1.37
LTBP3-211ENST00000528966 EIF4A1P60842 406 aaKnown RBP23.63■■□□□ 1.37
LTBP3-211ENST00000528966 KIF23Q02241 960 aaPredicted RBP23.63■■□□□ 1.37
LTBP3-211ENST00000528966 PARP10Q53GL7 1025 aa23.63■■□□□ 1.37
LTBP3-211ENST00000528966 PRPF38BQ5VTL8 546 aaKnown RBP23.63■■□□□ 1.37
LTBP3-211ENST00000528966 SP8Q8IXZ3 490 aa23.63■■□□□ 1.37
LTBP3-211ENST00000528966 H7C1D1 291 aa23.62■■□□□ 1.37
LTBP3-211ENST00000528966 RNF186Q9NXI6 227 aa23.62■■□□□ 1.37
LTBP3-211ENST00000528966 TRPA1O75762 1119 aa23.61■■□□□ 1.37
LTBP3-211ENST00000528966 BBOX1O75936 387 aa23.61■■□□□ 1.37
LTBP3-211ENST00000528966 SAMD7Q7Z3H4 446 aa23.61■■□□□ 1.37
LTBP3-211ENST00000528966 GBA2Q9HCG7 927 aaPredicted RBP23.61■■□□□ 1.37
LTBP3-211ENST00000528966 ZBTB12Q9Y330 459 aaPredicted RBP23.61■■□□□ 1.37
LTBP3-211ENST00000528966 EGFRP00533 1210 aa23.6■■□□□ 1.37
LTBP3-211ENST00000528966 KRT26Q7Z3Y9 468 aa23.6■■□□□ 1.37
LTBP3-211ENST00000528966 CCDC102AQ96A19 550 aa23.6■■□□□ 1.37
LTBP3-211ENST00000528966 UTP14AQ9BVJ6 771 aaKnown RBP23.6■■□□□ 1.37
LTBP3-211ENST00000528966 LRRC37AA6NMS7 1700 aa23.59■■□□□ 1.37
LTBP3-211ENST00000528966 LRP10Q7Z4F1 713 aa23.59■■□□□ 1.37
LTBP3-211ENST00000528966 PNISRQ8TF01 805 aaKnown RBP23.59■■□□□ 1.37
LTBP3-211ENST00000528966 ADM5C9JUS6 153 aa23.58■■□□□ 1.37
LTBP3-211ENST00000528966 ZNF157P51786 506 aaPredicted RBP23.58■■□□□ 1.37
LTBP3-211ENST00000528966 TBC1D10BQ4KMP7 808 aaPredicted RBP23.58■■□□□ 1.37
LTBP3-211ENST00000528966 C2orf69Q8N8R5 385 aa23.58■■□□□ 1.37
LTBP3-211ENST00000528966 DPF2Q92785 391 aa23.58■■□□□ 1.37
LTBP3-211ENST00000528966 ERBB4Q15303 1308 aa23.57■■□□□ 1.36
LTBP3-211ENST00000528966 PSMD14O00487 310 aa23.56■■□□□ 1.36
LTBP3-211ENST00000528966 HCLS1P14317 486 aaPredicted RBP23.56■■□□□ 1.36
LTBP3-211ENST00000528966 CTU1Q7Z7A3 348 aaKnown RBP23.56■■□□□ 1.36
LTBP3-211ENST00000528966 CSRNP1Q96S65 589 aa23.56■■□□□ 1.36
LTBP3-211ENST00000528966 THUMPD2Q9BTF0 503 aaKnown RBP23.56■■□□□ 1.36
LTBP3-211ENST00000528966 SLC10A3P09131 477 aa23.55■■□□□ 1.36
LTBP3-211ENST00000528966 GRAPQ13588 217 aa23.55■■□□□ 1.36
LTBP3-211ENST00000528966 GRAPLQ8TC17 118 aaPredicted RBP23.55■■□□□ 1.36
LTBP3-211ENST00000528966 PDIA6Q15084 440 aa23.54■■□□□ 1.36
LTBP3-211ENST00000528966 DDX46Q7L014 1031 aaKnown RBP23.54■■□□□ 1.36
LTBP3-211ENST00000528966 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
LTBP3-211ENST00000528966 DCPSQ96C86 337 aaKnown RBP23.53■■□□□ 1.36
LTBP3-211ENST00000528966 PROSER3Q2NL68 480 aa23.52■■□□□ 1.36
LTBP3-211ENST00000528966 DBNDD1Q9H9R9 158 aa23.52■■□□□ 1.36
LTBP3-211ENST00000528966 HPS5Q9UPZ3 1129 aa23.52■■□□□ 1.36
LTBP3-211ENST00000528966 RBM26Q5T8P6 1007 aaKnown RBP23.51■■□□□ 1.35
LTBP3-211ENST00000528966 NLRP10Q86W26 655 aa23.51■■□□□ 1.35
LTBP3-211ENST00000528966 KCNQ5Q9NR82 932 aa23.51■■□□□ 1.35
LTBP3-211ENST00000528966 SCN9AQ15858 1988 aa23.51■■□□□ 1.35
LTBP3-211ENST00000528966 ANXA1P04083 346 aa23.5■■□□□ 1.35
LTBP3-211ENST00000528966 WASHC4Q2M389 1173 aa23.5■■□□□ 1.35
LTBP3-211ENST00000528966 RTL9Q8NET4 1388 aa23.5■■□□□ 1.35
LTBP3-211ENST00000528966 DDX60Q8IY21 1712 aaKnown RBP23.5■■□□□ 1.35
LTBP3-211ENST00000528966 COL4A1P02462 1669 aa23.49■■□□□ 1.35
LTBP3-211ENST00000528966 RPS12P25398 132 aaKnown RBP23.49■■□□□ 1.35
LTBP3-211ENST00000528966 ASTN2O75129 1339 aaPredicted RBP23.49■■□□□ 1.35
LTBP3-211ENST00000528966 TMC4Q7Z404 712 aa23.48■■□□□ 1.35
LTBP3-211ENST00000528966 RASAL3Q86YV0 1011 aa23.48■■□□□ 1.35
LTBP3-211ENST00000528966 GGA3Q9NZ52 723 aa23.48■■□□□ 1.35
LTBP3-211ENST00000528966 MKI67P46013 3256 aaKnown RBP23.47■■□□□ 1.35
LTBP3-211ENST00000528966 RIMBP2O15034 1052 aa23.47■■□□□ 1.35
LTBP3-211ENST00000528966 KIF4BQ2VIQ3 1234 aa23.47■■□□□ 1.35
LTBP3-211ENST00000528966 CDCA5Q96FF9 252 aa23.47■■□□□ 1.35
LTBP3-211ENST00000528966 TRMT112Q9UI30 125 aaKnown RBP23.47■■□□□ 1.35
LTBP3-211ENST00000528966 SH3TC1Q8TE82 1336 aa23.47■■□□□ 1.35
LTBP3-211ENST00000528966 ECE2O60344 883 aa23.46■■□□□ 1.35
LTBP3-211ENST00000528966 EIF2S2P20042 333 aaKnown RBP23.46■■□□□ 1.35
LTBP3-211ENST00000528966 SULF1Q8IWU6 871 aa23.46■■□□□ 1.35
LTBP3-211ENST00000528966 POLLQ9UGP5 575 aa23.46■■□□□ 1.35
LTBP3-211ENST00000528966 NSFL1CQ9UNZ2 370 aaKnown RBP23.46■■□□□ 1.35
LTBP3-211ENST00000528966 HSP90AB3PQ58FF7 597 aa23.45■■□□□ 1.34
LTBP3-211ENST00000528966 PLEKHF1Q96S99 279 aa23.45■■□□□ 1.34
LTBP3-211ENST00000528966 NFE2L2Q16236 605 aa23.44■■□□□ 1.34
LTBP3-211ENST00000528966 PKN2Q16513 984 aaKnown RBP23.44■■□□□ 1.34
LTBP3-211ENST00000528966 DOK7Q18PE1 504 aa23.44■■□□□ 1.34
LTBP3-211ENST00000528966 COPS6Q7L5N1 327 aa23.44■■□□□ 1.34
LTBP3-211ENST00000528966 REM2Q8IYK8 340 aaPredicted RBP23.44■■□□□ 1.34
LTBP3-211ENST00000528966 CELF1Q92879 486 aaKnown RBP23.44■■□□□ 1.34
LTBP3-211ENST00000528966 ZNF428Q96B54 188 aa23.44■■□□□ 1.34
LTBP3-211ENST00000528966 PAPPA2Q9BXP8 1791 aa23.43■■□□□ 1.34
LTBP3-211ENST00000528966 C6orf229H3BNL8 230 aa23.43■■□□□ 1.34
LTBP3-211ENST00000528966 GPSM2P81274 684 aa23.43■■□□□ 1.34
LTBP3-211ENST00000528966 TCIRG1Q13488 830 aa23.43■■□□□ 1.34
LTBP3-211ENST00000528966 ZNF296Q8WUU4 475 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms