RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 WDR33Q9C0J8 1336 aaKnown RBP22.05■■□□□ 1.12
CCS-204ENST00000526066 PPP1R42Q7Z4L9 355 aa22.04■■□□□ 1.12
CCS-204ENST00000526066 CRAMP1Q96RY5 1269 aa22.04■■□□□ 1.12
CCS-204ENST00000526066 DDX21Q9NR30 783 aaKnown RBP eCLIP22.04■■□□□ 1.12
CCS-204ENST00000526066 TCERG1O14776 1098 aaKnown RBP22.03■■□□□ 1.12
CCS-204ENST00000526066 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
CCS-204ENST00000526066 ECE1P42892 770 aa22.03■■□□□ 1.12
CCS-204ENST00000526066 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
CCS-204ENST00000526066 TTLL7Q6ZT98 887 aa22.03■■□□□ 1.12
CCS-204ENST00000526066 PARP10Q53GL7 1025 aa22.02■■□□□ 1.12
CCS-204ENST00000526066 USP50Q70EL3 339 aaPredicted RBP22.02■■□□□ 1.12
CCS-204ENST00000526066 STK31Q9BXU1 1019 aa22.02■■□□□ 1.12
CCS-204ENST00000526066 DBF4Q9UBU7 674 aaPredicted RBP22.02■■□□□ 1.12
CCS-204ENST00000526066 RCAN3Q9UKA8 241 aa22.02■■□□□ 1.12
CCS-204ENST00000526066 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
CCS-204ENST00000526066 PPIP5K2O43314 1243 aa22.01■■□□□ 1.11
CCS-204ENST00000526066 BRPF1P55201 1214 aaPredicted RBP22.01■■□□□ 1.11
CCS-204ENST00000526066 GRM1Q13255 1194 aa22.01■■□□□ 1.11
CCS-204ENST00000526066 SUSD4Q5VX71 490 aa22.01■■□□□ 1.11
CCS-204ENST00000526066 SSH1Q8WYL5 1049 aa22.01■■□□□ 1.11
CCS-204ENST00000526066 NECTIN2Q92692 538 aa22.01■■□□□ 1.11
CCS-204ENST00000526066 NLRP3Q96P20 1036 aa22.01■■□□□ 1.11
CCS-204ENST00000526066 UBN2Q6ZU65 1347 aa22.01■■□□□ 1.11
CCS-204ENST00000526066 PDIA6Q15084 440 aa22■■□□□ 1.11
CCS-204ENST00000526066 SUPT20HQ8NEM7 779 aa22■■□□□ 1.11
CCS-204ENST00000526066 CHPF2Q9P2E5 772 aa22■■□□□ 1.11
CCS-204ENST00000526066 TRPM7Q96QT4 1865 aa21.99■■□□□ 1.11
CCS-204ENST00000526066 HSPA8P11142 646 aaKnown RBP21.99■■□□□ 1.11
CCS-204ENST00000526066 EPS15P42566 896 aa21.99■■□□□ 1.11
CCS-204ENST00000526066 SCNN1DP51172 638 aa21.99■■□□□ 1.11
CCS-204ENST00000526066 GIGYF2Q6Y7W6 1299 aaKnown RBP21.99■■□□□ 1.11
CCS-204ENST00000526066 NTSR2O95665 410 aa21.98■■□□□ 1.11
CCS-204ENST00000526066 ZNF34Q8IZ26 560 aa21.98■■□□□ 1.11
CCS-204ENST00000526066 CAPNS2Q96L46 248 aa21.98■■□□□ 1.11
CCS-204ENST00000526066 VPS33BQ9H267 617 aa21.98■■□□□ 1.11
CCS-204ENST00000526066 SMC4Q9NTJ3 1288 aa21.98■■□□□ 1.11
CCS-204ENST00000526066 HYPKQ9NX55 129 aa21.98■■□□□ 1.11
CCS-204ENST00000526066 COL4A5P29400 1685 aa21.98■■□□□ 1.11
CCS-204ENST00000526066 LTBP1Q14766 1721 aa21.97■■□□□ 1.11
CCS-204ENST00000526066 SLC4A2P04920 1241 aa21.97■■□□□ 1.11
CCS-204ENST00000526066 LRP10Q7Z4F1 713 aa21.97■■□□□ 1.11
CCS-204ENST00000526066 MRPL50Q8N5N7 158 aaKnown RBP21.97■■□□□ 1.11
CCS-204ENST00000526066 UTP14AQ9BVJ6 771 aaKnown RBP21.97■■□□□ 1.11
CCS-204ENST00000526066 AOC3Q16853 763 aa21.96■■□□□ 1.11
CCS-204ENST00000526066 ADARB2Q9NS39 739 aaKnown RBP21.96■■□□□ 1.11
CCS-204ENST00000526066 ATP6V0A2Q9Y487 856 aa21.96■■□□□ 1.11
CCS-204ENST00000526066 SLC34A2O95436 690 aa21.95■■□□□ 1.1
CCS-204ENST00000526066 PROSER3Q2NL68 480 aa21.95■■□□□ 1.1
CCS-204ENST00000526066 ABHD8Q96I13 439 aa21.95■■□□□ 1.1
CCS-204ENST00000526066 GPR101Q96P66 508 aaPredicted RBP21.95■■□□□ 1.1
CCS-204ENST00000526066 BCL2L13Q9BXK5 485 aa21.95■■□□□ 1.1
CCS-204ENST00000526066 ZNRF3Q9ULT6 936 aa21.95■■□□□ 1.1
CCS-204ENST00000526066 DPP8Q6V1X1 898 aaPredicted RBP21.94■■□□□ 1.1
CCS-204ENST00000526066 GPRC5DQ9NZD1 345 aa21.94■■□□□ 1.1
CCS-204ENST00000526066 KIF16BQ96L93 1317 aa21.94■■□□□ 1.1
CCS-204ENST00000526066 THSD7BQ9C0I4 1608 aa21.94■■□□□ 1.1
CCS-204ENST00000526066 CACNA1FO60840 1977 aa21.94■■□□□ 1.1
CCS-204ENST00000526066 TRAF5O00463 557 aa21.93■■□□□ 1.1
CCS-204ENST00000526066 BCAR3O75815 825 aa21.93■■□□□ 1.1
CCS-204ENST00000526066 ANXA1P04083 346 aa21.93■■□□□ 1.1
CCS-204ENST00000526066 HSP90AB3PQ58FF7 597 aa21.93■■□□□ 1.1
CCS-204ENST00000526066 CYP4F22Q6NT55 531 aa21.93■■□□□ 1.1
CCS-204ENST00000526066 TLL2Q9Y6L7 1015 aa21.92■■□□□ 1.1
CCS-204ENST00000526066 ABCC4O15439 1325 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 PTPRCP08575 1304 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 CDHR2Q9BYE9 1310 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 BBOX1O75936 387 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 FLIIQ13045 1269 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 TNIP1Q15025 636 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 C3orf67Q6ZVT6 689 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 G2E3Q7L622 706 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 MPNDQ8N594 471 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 ANKRD36CQ5JPF3 1778 aa21.91■■□□□ 1.1
CCS-204ENST00000526066 MAP2K2P36507 400 aa21.9■■□□□ 1.1
CCS-204ENST00000526066 FMR1Q06787 632 aaKnown RBP eCLIP21.9■■□□□ 1.1
CCS-204ENST00000526066 SLC10A5Q5PT55 438 aa21.9■■□□□ 1.1
CCS-204ENST00000526066 CIAPIN1Q6FI81 312 aa21.9■■□□□ 1.1
CCS-204ENST00000526066 DDX46Q7L014 1031 aaKnown RBP21.9■■□□□ 1.1
CCS-204ENST00000526066 PHAXQ9H814 394 aaKnown RBP21.9■■□□□ 1.1
CCS-204ENST00000526066 IPO8O15397 1037 aaKnown RBP21.89■■□□□ 1.09
CCS-204ENST00000526066 CELF2O95319 508 aaKnown RBP21.89■■□□□ 1.09
CCS-204ENST00000526066 GMPSP49915 693 aaPredicted RBP21.89■■□□□ 1.09
CCS-204ENST00000526066 CXCL9Q07325 125 aa21.89■■□□□ 1.09
CCS-204ENST00000526066 CST9Q5W186 159 aa21.89■■□□□ 1.09
CCS-204ENST00000526066 COPS6Q7L5N1 327 aa21.89■■□□□ 1.09
CCS-204ENST00000526066 SP8Q8IXZ3 490 aa21.89■■□□□ 1.09
CCS-204ENST00000526066 XAGE3Q8WTP9 111 aa21.89■■□□□ 1.09
CCS-204ENST00000526066 ARHGAP45Q92619 1136 aa21.89■■□□□ 1.09
CCS-204ENST00000526066 CA12O43570 354 aa21.88■■□□□ 1.09
CCS-204ENST00000526066 RTFDC1Q9BY42 306 aaPredicted RBP21.88■■□□□ 1.09
CCS-204ENST00000526066 NOB1Q9ULX3 412 aaKnown RBP21.88■■□□□ 1.09
CCS-204ENST00000526066 CCDC85CA6NKD9 419 aa21.87■■□□□ 1.09
CCS-204ENST00000526066 DDX58O95786 925 aaKnown RBP21.87■■□□□ 1.09
CCS-204ENST00000526066 AIMP1Q12904 312 aaKnown RBP21.87■■□□□ 1.09
CCS-204ENST00000526066 SLC51AQ86UW1 340 aa21.87■■□□□ 1.09
CCS-204ENST00000526066 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.87■■□□□ 1.09
CCS-204ENST00000526066 ZNF408Q9H9D4 720 aa21.87■■□□□ 1.09
CCS-204ENST00000526066 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
CCS-204ENST00000526066 LAMB2P55268 1798 aa21.87■■□□□ 1.09
CCS-204ENST00000526066 KIAA2012Q0VF49 1180 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms