RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 COL26A1Q96A83 441 aa8.29□□□□□ -1.08
CLK4-213ENST00000523013 JPH1Q9HDC5 661 aaPredicted RBP8.29□□□□□ -1.08
CLK4-213ENST00000523013 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
CLK4-213ENST00000523013 K7ELQ4 463 aaPredicted RBP8.28□□□□□ -1.08
CLK4-213ENST00000523013 AFF1P51825 1210 aaKnown RBP8.28□□□□□ -1.08
CLK4-213ENST00000523013 TRIM28Q13263 835 aaKnown RBP8.28□□□□□ -1.08
CLK4-213ENST00000523013 FAM26DQ5JW98 314 aa8.28□□□□□ -1.08
CLK4-213ENST00000523013 ETFBKMTQ8IXQ9 262 aa8.28□□□□□ -1.08
CLK4-213ENST00000523013 TRPM4Q8TD43 1214 aa8.28□□□□□ -1.08
CLK4-213ENST00000523013 PBXIP1Q96AQ6 731 aa8.28□□□□□ -1.08
CLK4-213ENST00000523013 SLAIN2Q9P270 581 aa8.28□□□□□ -1.08
CLK4-213ENST00000523013 GTF3C3Q9Y5Q9 886 aa8.28□□□□□ -1.08
CLK4-213ENST00000523013 ARID3CA6NKF2 412 aa8.27□□□□□ -1.09
CLK4-213ENST00000523013 EGFRP00533 1210 aa8.27□□□□□ -1.09
CLK4-213ENST00000523013 RARAP10276 462 aa8.27□□□□□ -1.09
CLK4-213ENST00000523013 C16orf46Q6P387 395 aa8.27□□□□□ -1.09
CLK4-213ENST00000523013 DHX32Q7L7V1 743 aaKnown RBP8.27□□□□□ -1.09
CLK4-213ENST00000523013 RGL4Q8IZJ4 473 aa8.27□□□□□ -1.09
CLK4-213ENST00000523013 CLP1Q92989 425 aaKnown RBP8.27□□□□□ -1.09
CLK4-213ENST00000523013 CCDC97Q96F63 343 aaPredicted RBP8.27□□□□□ -1.09
CLK4-213ENST00000523013 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
CLK4-213ENST00000523013 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.09
CLK4-213ENST00000523013 TNFRSF10BO14763 440 aa8.26□□□□□ -1.09
CLK4-213ENST00000523013 GATA4P43694 442 aa8.26□□□□□ -1.09
CLK4-213ENST00000523013 GRIK4Q16099 956 aa8.26□□□□□ -1.09
CLK4-213ENST00000523013 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
CLK4-213ENST00000523013 FAM35AQ86V20 835 aa8.26□□□□□ -1.09
CLK4-213ENST00000523013 LPIN3Q9BQK8 851 aa8.26□□□□□ -1.09
CLK4-213ENST00000523013 MKNK1Q9BUB5 465 aa8.26□□□□□ -1.09
CLK4-213ENST00000523013 A0A0A0MRY4 1105 aa8.25□□□□□ -1.09
CLK4-213ENST00000523013 RGS9O75916 674 aaPredicted RBP8.25□□□□□ -1.09
CLK4-213ENST00000523013 APBA3O96018 575 aa8.25□□□□□ -1.09
CLK4-213ENST00000523013 CPB1P15086 417 aa8.25□□□□□ -1.09
CLK4-213ENST00000523013 GPLD1P80108 840 aa8.25□□□□□ -1.09
CLK4-213ENST00000523013 PLAURQ03405 335 aa8.25□□□□□ -1.09
CLK4-213ENST00000523013 GRIK5Q16478 980 aa8.25□□□□□ -1.09
CLK4-213ENST00000523013 PCSK7Q16549 785 aa8.25□□□□□ -1.09
CLK4-213ENST00000523013 PERM1Q5SV97 790 aa8.25□□□□□ -1.09
CLK4-213ENST00000523013 CMTR1Q8N1G2 835 aaKnown RBP8.25□□□□□ -1.09
CLK4-213ENST00000523013 XYLBO75191 536 aa8.24□□□□□ -1.09
CLK4-213ENST00000523013 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
CLK4-213ENST00000523013 MLLT1Q03111 559 aaPredicted RBP8.24□□□□□ -1.09
CLK4-213ENST00000523013 DOC2BQ14184 412 aa8.24□□□□□ -1.09
CLK4-213ENST00000523013 FRRS1LQ9P0K9 344 aa8.24□□□□□ -1.09
CLK4-213ENST00000523013 NAA30Q147X3 362 aaPredicted RBP8.23□□□□□ -1.09
CLK4-213ENST00000523013 TRIP4Q15650 581 aaPredicted RBP8.23□□□□□ -1.09
CLK4-213ENST00000523013 TLR7Q9NYK1 1049 aaKnown RBP8.23□□□□□ -1.09
CLK4-213ENST00000523013 MMP20O60882 483 aa8.22□□□□□ -1.09
CLK4-213ENST00000523013 PTCD1O75127 700 aaKnown RBP8.22□□□□□ -1.09
CLK4-213ENST00000523013 SELPP16109 830 aa8.22□□□□□ -1.09
CLK4-213ENST00000523013 ITGB7P26010 798 aa8.22□□□□□ -1.09
CLK4-213ENST00000523013 NRLP54845 237 aa8.22□□□□□ -1.09
CLK4-213ENST00000523013 DMRTC2Q8IXT2 367 aaPredicted RBP8.22□□□□□ -1.09
CLK4-213ENST00000523013 NACC1Q96RE7 527 aa8.22□□□□□ -1.09
CLK4-213ENST00000523013 ELNP15502 786 aa8.21□□□□□ -1.1
CLK4-213ENST00000523013 MSL1Q68DK7 614 aa8.21□□□□□ -1.1
CLK4-213ENST00000523013 ELMSAN1Q6PJG2 1045 aa8.21□□□□□ -1.1
CLK4-213ENST00000523013 HFE2Q6ZVN8 426 aa8.21□□□□□ -1.1
CLK4-213ENST00000523013 TTC9Q92623 222 aa8.21□□□□□ -1.1
CLK4-213ENST00000523013 RAC1P63000 192 aa8.2□□□□□ -1.1
CLK4-213ENST00000523013 FMR1NBQ8N0W7 255 aaPredicted RBP8.2□□□□□ -1.1
CLK4-213ENST00000523013 TPSG1Q9NRR2 321 aa8.2□□□□□ -1.1
CLK4-213ENST00000523013 C9orf172C9J069 976 aa8.19□□□□□ -1.1
CLK4-213ENST00000523013 ZBTB39O15060 712 aa8.19□□□□□ -1.1
CLK4-213ENST00000523013 HOXD8P13378 290 aaPredicted RBP8.19□□□□□ -1.1
CLK4-213ENST00000523013 ATP2B4P23634 1241 aa8.19□□□□□ -1.1
CLK4-213ENST00000523013 ADGRE1Q14246 886 aa8.19□□□□□ -1.1
CLK4-213ENST00000523013 SHISA2Q6UWI4 295 aa8.19□□□□□ -1.1
CLK4-213ENST00000523013 CCDC82Q8N4S0 544 aa8.19□□□□□ -1.1
CLK4-213ENST00000523013 SMG9Q9H0W8 520 aaKnown RBP8.19□□□□□ -1.1
CLK4-213ENST00000523013 LOC102724428A0A0B4J2F2 783 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 J3QW42 95 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 ARID4AP29374 1257 aaPredicted RBP8.18□□□□□ -1.1
CLK4-213ENST00000523013 SOX18P35713 384 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 SIK1P57059 783 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 MBTPS1Q14703 1052 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 RSPO4Q2I0M5 234 aaPredicted RBP8.18□□□□□ -1.1
CLK4-213ENST00000523013 NKAPLQ5M9Q1 402 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 NLRP13Q86W25 1043 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 LENG1Q96BZ8 264 aaPredicted RBP8.18□□□□□ -1.1
CLK4-213ENST00000523013 C1orf115Q9H7X2 142 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 STIM2Q9P246 746 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
CLK4-213ENST00000523013 PSAPP07602 524 aa8.17□□□□□ -1.1
CLK4-213ENST00000523013 EIF2AK2P19525 551 aaKnown RBP8.17□□□□□ -1.1
CLK4-213ENST00000523013 ZAP70P43403 619 aa8.17□□□□□ -1.1
CLK4-213ENST00000523013 NSUN5Q96P11 429 aaKnown RBP8.17□□□□□ -1.1
CLK4-213ENST00000523013 SEMA6BQ9H3T3 888 aa8.17□□□□□ -1.1
CLK4-213ENST00000523013 UBAP1LF5GYI3 381 aa8.16□□□□□ -1.1
CLK4-213ENST00000523013 WFDC8Q8IUA0 241 aa8.16□□□□□ -1.1
CLK4-213ENST00000523013 DTWD1Q8N5C7 304 aa8.16□□□□□ -1.1
CLK4-213ENST00000523013 PIK3R5Q8WYR1 880 aa8.16□□□□□ -1.1
CLK4-213ENST00000523013 PLD4Q96BZ4 506 aa8.16□□□□□ -1.1
CLK4-213ENST00000523013 FBXO11Q86XK2 927 aa8.15□□□□□ -1.1
CLK4-213ENST00000523013 GPR152Q8TDT2 470 aa8.15□□□□□ -1.1
CLK4-213ENST00000523013 FAM13BQ9NYF5 915 aa8.15□□□□□ -1.1
CLK4-213ENST00000523013 TMEM88BA6NKF7 163 aa8.14□□□□□ -1.11
CLK4-213ENST00000523013 DEAF1O75398 565 aaPredicted RBP8.14□□□□□ -1.11
CLK4-213ENST00000523013 SCNN1AP37088 669 aa8.14□□□□□ -1.11
CLK4-213ENST00000523013 NRG1Q02297 640 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms