RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 A0A1W2PPC1 479 aa10.46□□□□□ -0.74
HMBOX1-208ENST00000521516 SPTBN5Q9NRC6 3674 aaKnown RBP10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 YDJCA8MPS7 323 aa10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 SOX1O00570 391 aaPredicted RBP10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 TBC1D10BQ4KMP7 808 aaPredicted RBP10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 RPGRQ92834 1020 aaKnown RBP10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 ZNF333Q96JL9 665 aa10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 TMEM106CQ9BVX2 250 aa10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 ZNF790Q6PG37 636 aa10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 STXBP5LQ9Y2K9 1186 aa10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 ATP6V0A2Q9Y487 856 aa10.45□□□□□ -0.74
HMBOX1-208ENST00000521516 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
HMBOX1-208ENST00000521516 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
HMBOX1-208ENST00000521516 SREBF2Q12772 1141 aa10.44□□□□□ -0.74
HMBOX1-208ENST00000521516 RBM17Q96I25 401 aaKnown RBP10.44□□□□□ -0.74
HMBOX1-208ENST00000521516 ZBTB12Q9Y330 459 aaPredicted RBP10.44□□□□□ -0.74
HMBOX1-208ENST00000521516 ZNF609O15014 1411 aa10.44□□□□□ -0.74
HMBOX1-208ENST00000521516 VCANP13611 3396 aa10.44□□□□□ -0.74
HMBOX1-208ENST00000521516 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
HMBOX1-208ENST00000521516 TNNT2P45379 298 aaPredicted RBP10.43□□□□□ -0.74
HMBOX1-208ENST00000521516 NEUROD1Q13562 356 aa10.43□□□□□ -0.74
HMBOX1-208ENST00000521516 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
HMBOX1-208ENST00000521516 LRCH3Q96II8 777 aa10.43□□□□□ -0.74
HMBOX1-208ENST00000521516 NYXQ9GZU5 481 aa10.43□□□□□ -0.74
HMBOX1-208ENST00000521516 GGA3Q9NZ52 723 aa10.43□□□□□ -0.74
HMBOX1-208ENST00000521516 TCERG1O14776 1098 aaKnown RBP10.42□□□□□ -0.74
HMBOX1-208ENST00000521516 ALDH1A1P00352 501 aa10.42□□□□□ -0.74
HMBOX1-208ENST00000521516 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
HMBOX1-208ENST00000521516 ERBB4Q15303 1308 aa10.42□□□□□ -0.74
HMBOX1-208ENST00000521516 RPS12P25398 132 aaKnown RBP10.42□□□□□ -0.74
HMBOX1-208ENST00000521516 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
HMBOX1-208ENST00000521516 IBTKQ9P2D0 1353 aaPredicted RBP10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 MOB2Q70IA6 237 aa10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 NUTM1Q86Y26 1132 aa10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 ERO1AQ96HE7 468 aa10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 TMX4Q9H1E5 349 aaPredicted RBP10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 UBE2Q2LH0YL09 131 aa10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 PSMD14O00487 310 aa10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 IL13P35225 146 aa10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 KIF4BQ2VIQ3 1234 aa10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 DPP8Q6V1X1 898 aaPredicted RBP10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 ASTN2O75129 1339 aaPredicted RBP10.41□□□□□ -0.74
HMBOX1-208ENST00000521516 KDM3BQ7LBC6 1761 aa10.4□□□□□ -0.74
HMBOX1-208ENST00000521516 PIP4K2AP48426 406 aaPredicted RBP10.4□□□□□ -0.74
HMBOX1-208ENST00000521516 HLFQ16534 295 aa10.4□□□□□ -0.74
HMBOX1-208ENST00000521516 MTHFSDQ2M296 383 aaKnown RBP10.4□□□□□ -0.74
HMBOX1-208ENST00000521516 RBM26Q5T8P6 1007 aaKnown RBP10.4□□□□□ -0.74
HMBOX1-208ENST00000521516 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.4□□□□□ -0.74
HMBOX1-208ENST00000521516 USP16Q9Y5T5 823 aa10.39□□□□□ -0.75
HMBOX1-208ENST00000521516 SIPA1L3O60292 1781 aaPredicted RBP10.39□□□□□ -0.75
HMBOX1-208ENST00000521516 C3orf67Q6ZVT6 689 aa10.39□□□□□ -0.75
HMBOX1-208ENST00000521516 SP8Q8IXZ3 490 aa10.39□□□□□ -0.75
HMBOX1-208ENST00000521516 MPNDQ8N594 471 aa10.39□□□□□ -0.75
HMBOX1-208ENST00000521516 EFCC1Q9HA90 598 aa10.39□□□□□ -0.75
HMBOX1-208ENST00000521516 CD99L2Q8TCZ2 262 aa10.38□□□□□ -0.75
HMBOX1-208ENST00000521516 DPF3Q92784 378 aa10.38□□□□□ -0.75
HMBOX1-208ENST00000521516 NBPF26B4DH59 902 aa10.38□□□□□ -0.75
HMBOX1-208ENST00000521516 CAP1Q01518 475 aa10.38□□□□□ -0.75
HMBOX1-208ENST00000521516 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
HMBOX1-208ENST00000521516 NBPF10Q6P3W6 841 aaKnown RBP10.38□□□□□ -0.75
HMBOX1-208ENST00000521516 DEFB123Q8N688 67 aa10.38□□□□□ -0.75
HMBOX1-208ENST00000521516 DUOX1Q9NRD9 1551 aa10.38□□□□□ -0.75
HMBOX1-208ENST00000521516 ABCC4O15439 1325 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 WTIPA6NIX2 430 aaPredicted RBP10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 ZBTB7BO15156 539 aaPredicted RBP10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 ANGEL2Q5VTE6 544 aaKnown RBP10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 TTC28Q96AY4 2481 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 RTL9Q8NET4 1388 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 BBOX1O75936 387 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 COL9A1P20849 921 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 INHBEP58166 350 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 UBE2Q1Q7Z7E8 422 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 IL17REQ8NFR9 667 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 MTMR10Q9NXD2 777 aa10.37□□□□□ -0.75
HMBOX1-208ENST00000521516 ZNF280AP59817 542 aaPredicted RBP10.36□□□□□ -0.75
HMBOX1-208ENST00000521516 TEFQ10587 303 aa10.36□□□□□ -0.75
HMBOX1-208ENST00000521516 SLC9C1Q4G0N8 1177 aa10.36□□□□□ -0.75
HMBOX1-208ENST00000521516 SPRYD7Q5W111 196 aa10.36□□□□□ -0.75
HMBOX1-208ENST00000521516 KCNQ3O43525 872 aa10.35□□□□□ -0.75
HMBOX1-208ENST00000521516 SCARF1Q14162 830 aa10.35□□□□□ -0.75
HMBOX1-208ENST00000521516 SHISA4Q96DD7 197 aa10.35□□□□□ -0.75
HMBOX1-208ENST00000521516 NR2E3Q9Y5X4 410 aa10.35□□□□□ -0.75
HMBOX1-208ENST00000521516 UBN2Q6ZU65 1347 aa10.35□□□□□ -0.75
HMBOX1-208ENST00000521516 MANSC4A6NHS7 340 aaPredicted RBP10.35□□□□□ -0.75
HMBOX1-208ENST00000521516 ERVV-1B6SEH8 477 aa10.35□□□□□ -0.75
HMBOX1-208ENST00000521516 NECTIN2Q92692 538 aa10.35□□□□□ -0.75
HMBOX1-208ENST00000521516 NTSR2O95665 410 aa10.34□□□□□ -0.75
HMBOX1-208ENST00000521516 PLA2G5P39877 138 aa10.34□□□□□ -0.75
HMBOX1-208ENST00000521516 PTPN12Q05209 780 aaKnown RBP10.34□□□□□ -0.75
HMBOX1-208ENST00000521516 Q7L0L9 218 aa10.34□□□□□ -0.75
HMBOX1-208ENST00000521516 HTATIP2Q9BUP3 242 aa10.34□□□□□ -0.75
HMBOX1-208ENST00000521516 PTCH2Q9Y6C5 1203 aa10.34□□□□□ -0.75
HMBOX1-208ENST00000521516 LAMB1P07942 1786 aa10.34□□□□□ -0.75
HMBOX1-208ENST00000521516 IGF2BP3O00425 579 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMBOX1-208ENST00000521516 VIL1P09327 827 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms