RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
TRIM35-204ENST00000521283 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
TRIM35-204ENST00000521283 SRGNP10124 158 aa13.18□□□□□ -0.3
TRIM35-204ENST00000521283 ALDH1B1P30837 517 aa13.18□□□□□ -0.3
TRIM35-204ENST00000521283 HLFQ16534 295 aa13.18□□□□□ -0.3
TRIM35-204ENST00000521283 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
TRIM35-204ENST00000521283 RIC1Q4ADV7 1423 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 NPR1P16066 1061 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 DUSP27Q5VZP5 1158 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 WWC1Q8IX03 1113 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM35-204ENST00000521283 ADCY9O60503 1353 aa13.17□□□□□ -0.3
TRIM35-204ENST00000521283 CACNA1FO60840 1977 aa13.16□□□□□ -0.3
TRIM35-204ENST00000521283 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
TRIM35-204ENST00000521283 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
TRIM35-204ENST00000521283 TTLL7Q6ZT98 887 aa13.16□□□□□ -0.3
TRIM35-204ENST00000521283 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
TRIM35-204ENST00000521283 ZBTB3Q9H5J0 574 aa13.16□□□□□ -0.3
TRIM35-204ENST00000521283 WWC3Q9ULE0 1092 aa13.16□□□□□ -0.3
TRIM35-204ENST00000521283 ARFGEF2Q9Y6D5 1785 aa13.16□□□□□ -0.3
TRIM35-204ENST00000521283 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.3
TRIM35-204ENST00000521283 SBF1O95248 1867 aa13.15□□□□□ -0.3
TRIM35-204ENST00000521283 HSP90B1P14625 803 aaKnown RBP13.15□□□□□ -0.3
TRIM35-204ENST00000521283 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
TRIM35-204ENST00000521283 PLBD2Q8NHP8 589 aa13.15□□□□□ -0.3
TRIM35-204ENST00000521283 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
TRIM35-204ENST00000521283 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
TRIM35-204ENST00000521283 GPBP1L1Q9HC44 474 aaPredicted RBP13.15□□□□□ -0.3
TRIM35-204ENST00000521283 LMNB1P20700 586 aa13.14□□□□□ -0.31
TRIM35-204ENST00000521283 TCIRG1Q13488 830 aa13.14□□□□□ -0.31
TRIM35-204ENST00000521283 CC2D2BQ6DHV5 1058 aa13.14□□□□□ -0.31
TRIM35-204ENST00000521283 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
TRIM35-204ENST00000521283 UTP14AQ9BVJ6 771 aaKnown RBP13.14□□□□□ -0.31
TRIM35-204ENST00000521283 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
TRIM35-204ENST00000521283 LTBP3Q9NS15 1303 aa13.13□□□□□ -0.31
TRIM35-204ENST00000521283 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
TRIM35-204ENST00000521283 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
TRIM35-204ENST00000521283 CRY2Q49AN0 593 aa13.13□□□□□ -0.31
TRIM35-204ENST00000521283 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
TRIM35-204ENST00000521283 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
TRIM35-204ENST00000521283 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
TRIM35-204ENST00000521283 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
TRIM35-204ENST00000521283 PROSER3Q2NL68 480 aa13.12□□□□□ -0.31
TRIM35-204ENST00000521283 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
TRIM35-204ENST00000521283 C9orf131Q5VYM1 1079 aa13.12□□□□□ -0.31
TRIM35-204ENST00000521283 RTKN2Q8IZC4 609 aa13.12□□□□□ -0.31
TRIM35-204ENST00000521283 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
TRIM35-204ENST00000521283 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
TRIM35-204ENST00000521283 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
TRIM35-204ENST00000521283 COL11A2P13942 1736 aaPredicted RBP13.12□□□□□ -0.31
TRIM35-204ENST00000521283 FER1L6Q2WGJ9 1857 aa13.12□□□□□ -0.31
TRIM35-204ENST00000521283 FAM177BA6PVY3 158 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 CCER2I3L3R5 266 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 NTSR2O95665 410 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 GPTP24298 496 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
TRIM35-204ENST00000521283 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 PRPF40BQ6NWY9 871 aaKnown RBP13.11□□□□□ -0.31
TRIM35-204ENST00000521283 SPNS2Q8IVW8 549 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 FAM9BQ8IZU0 186 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
TRIM35-204ENST00000521283 RBM17Q96I25 401 aaKnown RBP13.11□□□□□ -0.31
TRIM35-204ENST00000521283 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 MYH16Q9H6N6 1097 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 RNF181Q9P0P0 153 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 DICER1Q9UPY3 1922 aaKnown RBP13.11□□□□□ -0.31
TRIM35-204ENST00000521283 UBN2Q6ZU65 1347 aa13.11□□□□□ -0.31
TRIM35-204ENST00000521283 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 C21orf2O43822 256 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 SH3TC1Q8TE82 1336 aa13.1□□□□□ -0.31
TRIM35-204ENST00000521283 ANXA1P04083 346 aa13.09□□□□□ -0.31
TRIM35-204ENST00000521283 TWISTNBQ3B726 338 aaPredicted RBP13.09□□□□□ -0.31
TRIM35-204ENST00000521283 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
TRIM35-204ENST00000521283 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
TRIM35-204ENST00000521283 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
TRIM35-204ENST00000521283 KHSRPQ92945 711 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIM35-204ENST00000521283 TRMT112Q9UI30 125 aaKnown RBP13.09□□□□□ -0.31
TRIM35-204ENST00000521283 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
TRIM35-204ENST00000521283 C1QTNF8P60827 252 aa13.08□□□□□ -0.32
TRIM35-204ENST00000521283 TMC4Q7Z404 712 aa13.08□□□□□ -0.32
TRIM35-204ENST00000521283 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
TRIM35-204ENST00000521283 C7orf43Q8WVR3 580 aa13.08□□□□□ -0.32
TRIM35-204ENST00000521283 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.32
TRIM35-204ENST00000521283 NFKBIEO00221 500 aa13.07□□□□□ -0.32
TRIM35-204ENST00000521283 BBOX1O75936 387 aa13.07□□□□□ -0.32
TRIM35-204ENST00000521283 NEXNQ0ZGT2 675 aa13.07□□□□□ -0.32
TRIM35-204ENST00000521283 VARS2Q5ST30 1063 aaKnown RBP13.07□□□□□ -0.32
TRIM35-204ENST00000521283 CCDC191Q8NCU4 936 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms