RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PAG1Q9NWQ8 432 aa13.54□□□□□ -0.24
CLK4-206ENST00000520878 ATP6V1DQ9Y5K8 247 aa13.54□□□□□ -0.24
CLK4-206ENST00000520878 SOS2Q07890 1332 aaPredicted RBP13.54□□□□□ -0.24
CLK4-206ENST00000520878 CEBPZQ03701 1054 aaKnown RBP13.53□□□□□ -0.24
CLK4-206ENST00000520878 KLHL40Q2TBA0 621 aa13.53□□□□□ -0.24
CLK4-206ENST00000520878 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
CLK4-206ENST00000520878 MPHOSPH8Q99549 860 aa13.53□□□□□ -0.24
CLK4-206ENST00000520878 SLC27A2O14975 620 aa13.53□□□□□ -0.24
CLK4-206ENST00000520878 ZBTB1Q9Y2K1 713 aa13.53□□□□□ -0.24
CLK4-206ENST00000520878 STX6O43752 255 aa13.53□□□□□ -0.24
CLK4-206ENST00000520878 HCLS1P14317 486 aaPredicted RBP13.53□□□□□ -0.24
CLK4-206ENST00000520878 RUFY3Q7L099 469 aa13.53□□□□□ -0.24
CLK4-206ENST00000520878 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.24
CLK4-206ENST00000520878 KCNQ4P56696 695 aa13.52□□□□□ -0.24
CLK4-206ENST00000520878 MCMDC2Q4G0Z9 681 aa13.52□□□□□ -0.24
CLK4-206ENST00000520878 ADAMTSL3P82987 1691 aa13.52□□□□□ -0.24
CLK4-206ENST00000520878 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 ATP5JP18859 108 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 HLFQ16534 295 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 GAS2L3Q86XJ1 694 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 MPNDQ8N594 471 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.25
CLK4-206ENST00000520878 NEK1Q96PY6 1258 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 ATG3Q9NT62 314 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
CLK4-206ENST00000520878 CNPY2Q9Y2B0 182 aa13.52□□□□□ -0.25
CLK4-206ENST00000520878 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
CLK4-206ENST00000520878 C8orf37Q96NL8 207 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 AKAP2Q9Y2D5 859 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 PXDNLA1KZ92 1463 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 H7C1W4 665 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 SYT1P21579 422 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 LRRFIP1Q32MZ4 808 aaKnown RBP13.51□□□□□ -0.25
CLK4-206ENST00000520878 BRF1Q92994 677 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 LARGE1O95461 756 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 LMBRD1Q9NUN5 540 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 TFIP11Q9UBB9 837 aaKnown RBP13.51□□□□□ -0.25
CLK4-206ENST00000520878 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
CLK4-206ENST00000520878 ITGA6P23229 1130 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 ATP2B3Q16720 1220 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 FAM173BQ6P4H8 233 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
CLK4-206ENST00000520878 IQSEC3Q9UPP2 1182 aaPredicted RBP13.5□□□□□ -0.25
CLK4-206ENST00000520878 MBD3O95983 291 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 ADORA1P30542 326 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 DDIT3P35638 169 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 ZSCAN23Q3MJ62 389 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 ZDHHC9Q9Y397 364 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
CLK4-206ENST00000520878 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
CLK4-206ENST00000520878 ME3Q16798 604 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 XAGE2Q96GT9 111 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 U3KPZ7 1027 aaPredicted RBP13.49□□□□□ -0.25
CLK4-206ENST00000520878 KRT32Q14532 448 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 VPS53Q5VIR6 699 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
CLK4-206ENST00000520878 FOXO4P98177 505 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 Q6ZUG5 572 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 KBTBD3Q8NAB2 608 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
CLK4-206ENST00000520878 CPDO75976 1380 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 ZSCAN22P10073 491 aaPredicted RBP13.48□□□□□ -0.25
CLK4-206ENST00000520878 NAP1L5Q96NT1 182 aaPredicted RBP13.48□□□□□ -0.25
CLK4-206ENST00000520878 GREM2Q9H772 168 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 ERBB4Q15303 1308 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 BRD1O95696 1058 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 DNM1Q05193 864 aaKnown RBP13.48□□□□□ -0.25
CLK4-206ENST00000520878 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
CLK4-206ENST00000520878 VPS37DQ86XT2 251 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 GADD45BO75293 160 aaPredicted RBP13.48□□□□□ -0.25
CLK4-206ENST00000520878 TAF5LO75529 589 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 TRDNQ13061 729 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 NIP7Q9Y221 180 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLK4-206ENST00000520878 DCCP43146 1447 aa13.48□□□□□ -0.25
CLK4-206ENST00000520878 MED1Q15648 1581 aaPredicted RBP13.47□□□□□ -0.25
CLK4-206ENST00000520878 SLIT3O75094 1523 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 UBAP1LF5GYI3 381 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 CPLX1O14810 134 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 RFX5P48382 616 aaPredicted RBP13.47□□□□□ -0.25
CLK4-206ENST00000520878 UTYO14607 1347 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 SNAP23O00161 211 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 CUL4AQ13619 759 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 NECTIN1Q15223 517 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 BICD2Q8TD16 824 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 PDCP20941 246 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 ZAP70P43403 619 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 CSPP1Q1MSJ5 1256 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
CLK4-206ENST00000520878 HAUS7Q99871 368 aa13.47□□□□□ -0.25
CLK4-206ENST00000520878 NSFL1CQ9UNZ2 370 aaKnown RBP13.47□□□□□ -0.25
CLK4-206ENST00000520878 MSNP26038 577 aaKnown RBP13.46□□□□□ -0.25
CLK4-206ENST00000520878 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.25
CLK4-206ENST00000520878 GIGYF2Q6Y7W6 1299 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms