RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 OTOP1Q7RTM1 612 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 SAMD7Q7Z3H4 446 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 MPNDQ8N594 471 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 CDCA5Q96FF9 252 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 NLRP3Q96P20 1036 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 RIC1Q4ADV7 1423 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 BBOX1O75936 387 aa6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 KIF4BQ2VIQ3 1234 aa6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 RBM26Q5T8P6 1007 aaKnown RBP6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 CCER1Q8TC90 406 aaPredicted RBP6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 NECTIN2Q92692 538 aa6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 DPF3Q92784 378 aa6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 GGA3Q9NZ52 723 aa6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 PTPN22Q9Y2R2 807 aa6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 SCN11AQ9UI33 1791 aa6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 IBTKQ9P2D0 1353 aaPredicted RBP6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 MKI67P46013 3256 aaKnown RBP6.66□□□□□ -1.34
AC055854.1-202ENST00000519624 SNRPA1P09661 255 aaKnown RBP6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 IL13P35225 146 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 TTLL12Q14166 644 aaPredicted RBP6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 MTHFSDQ2M296 383 aaKnown RBP6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 SLC9C1Q4G0N8 1177 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 OTUD7BQ6GQQ9 843 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 GPR153Q6NV75 609 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 DLK2Q6UY11 383 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 TMC4Q7Z404 712 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 PPP1R42Q7Z4L9 355 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 NUTM1Q86Y26 1132 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 SP8Q8IXZ3 490 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 HTATIP2Q9BUP3 242 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 EFCC1Q9HA90 598 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 ZBTB12Q9Y330 459 aaPredicted RBP6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 NR2E3Q9Y5X4 410 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 AKAP11Q9UKA4 1901 aa6.65□□□□□ -1.34
AC055854.1-202ENST00000519624 MANSC4A6NHS7 340 aaPredicted RBP6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 BTBD11A6QL63 1104 aa6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 GNAT3A8MTJ3 354 aa6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 ERVV-1B6SEH8 477 aa6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 WASHC4Q2M389 1173 aa6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 MORC1Q86VD1 984 aa6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 GAS2L2Q8NHY3 880 aa6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 COL25A1Q9BXS0 654 aaPredicted RBP6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 ABCC12Q96J65 1359 aa6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 SZT2Q5T011 3432 aa6.64□□□□□ -1.35
AC055854.1-202ENST00000519624 SHTN1A0MZ66 631 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 YDJCA8MPS7 323 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 G3V3G9 751 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 UBE2Q2LH0YL09 131 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 PSMD14O00487 310 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 DCAF8Q5TAQ9 597 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 ANGEL2Q5VTE6 544 aaKnown RBP6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 DIEXFQ68CQ4 756 aaKnown RBP6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 KIF6Q6ZMV9 814 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 ARMC9Q7Z3E5 817 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 UBR2Q8IWV8 1755 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 NKX2-3Q8TAU0 364 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 ZNF333Q96JL9 665 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 EYA3Q99504 573 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 PAPPA2Q9BXP8 1791 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 STXBP5LQ9Y2K9 1186 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 USP16Q9Y5T5 823 aa6.63□□□□□ -1.35
AC055854.1-202ENST00000519624 ABCC4O15439 1325 aa6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 EGFRP00533 1210 aa6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 HMOX1P09601 288 aa6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 PIP4K2AP48426 406 aaPredicted RBP6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 SP3Q02447 781 aa6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 MKRN3Q13064 507 aaKnown RBP6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 HLFQ16534 295 aa6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 PARP10Q53GL7 1025 aa6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 DDX46Q7L014 1031 aaKnown RBP6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 PRDM6Q9NQX0 595 aa6.62□□□□□ -1.35
AC055854.1-202ENST00000519624 A0A0C4DFX4 3053 aa6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 ZNF609O15014 1411 aa6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 MAP3K15Q6ZN16 1313 aa6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 ZNF316A6NFI3 1004 aaPredicted RBP6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 ZBTB48P10074 688 aaPredicted RBP6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 SCARF1Q14162 830 aa6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 IFNL1Q8IU54 200 aa6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 CD99L2Q8TCZ2 262 aa6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 PRO3102Q9H379 93 aa6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 DBNDD1Q9H9R9 158 aa6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 RBBP6Q7Z6E9 1792 aaKnown RBP6.61□□□□□ -1.35
AC055854.1-202ENST00000519624 C6orf229H3BNL8 230 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 ECE2O60344 883 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 WDHD1O75717 1129 aaPredicted RBP6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 NTSR2O95665 410 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 VIL1P09327 827 aaKnown RBP6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 GPTP24298 496 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 ZNF280AP59817 542 aaPredicted RBP6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 GRAPQ13588 217 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 SUSD4Q5VX71 490 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 SPRYD7Q5W111 196 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 DEFB123Q8N688 67 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 AGBL3Q8NEM8 1001 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 IL17REQ8NFR9 667 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 GRAPLQ8TC17 118 aaPredicted RBP6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 POLR3GLQ9BT43 218 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 R3HDMLQ9H3Y0 253 aa6.6□□□□□ -1.35
AC055854.1-202ENST00000519624 UNCXA6NJT0 531 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms