RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 ZNF609O15014 1411 aa11.2□□□□□ -0.62
CTNNA1-215ENST00000519309 SCN9AQ15858 1988 aa11.2□□□□□ -0.62
CTNNA1-215ENST00000519309 TNIP1Q15025 636 aa11.2□□□□□ -0.62
CTNNA1-215ENST00000519309 RGMBQ6NW40 437 aa11.2□□□□□ -0.62
CTNNA1-215ENST00000519309 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
CTNNA1-215ENST00000519309 LAMB1P07942 1786 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 SLC10A3P09131 477 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 DCTN1Q14203 1278 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 TAF7Q15545 349 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 SLC10A5Q5PT55 438 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 DPF2Q92785 391 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 TMX4Q9H1E5 349 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 ZBTB3Q9H5J0 574 aa11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 GBA2Q9HCG7 927 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-215ENST00000519309 SHTN1A0MZ66 631 aa11.18□□□□□ -0.62
CTNNA1-215ENST00000519309 TCERG1O14776 1098 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-215ENST00000519309 LRP10Q7Z4F1 713 aa11.18□□□□□ -0.62
CTNNA1-215ENST00000519309 CTU1Q7Z7A3 348 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-215ENST00000519309 SP8Q8IXZ3 490 aa11.18□□□□□ -0.62
CTNNA1-215ENST00000519309 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
CTNNA1-215ENST00000519309 CNOT7Q9UIV1 285 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-215ENST00000519309 H7C1D1 291 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 BBOX1O75936 387 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 RAD17O75943 681 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 KIF23Q02241 960 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 KRT26Q7Z3Y9 468 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 TMC4Q7Z404 712 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 USP48Q86UV5 1035 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 MPNDQ8N594 471 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 RNF186Q9NXI6 227 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 COL4A1P02462 1669 aa11.17□□□□□ -0.62
CTNNA1-215ENST00000519309 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-215ENST00000519309 RPS12P25398 132 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-215ENST00000519309 GRAPQ13588 217 aa11.16□□□□□ -0.62
CTNNA1-215ENST00000519309 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-215ENST00000519309 GRAPLQ8TC17 118 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-215ENST00000519309 HTTP42858 3142 aa11.16□□□□□ -0.62
CTNNA1-215ENST00000519309 TRPA1O75762 1119 aa11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 EGFRP00533 1210 aa11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 MYL6BP14649 208 aa11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 NGEFQ8N5V2 710 aa11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 UTP14AQ9BVJ6 771 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 HPS5Q9UPZ3 1129 aa11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 RRP7AQ9Y3A4 280 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-215ENST00000519309 RTL9Q8NET4 1388 aa11.15□□□□□ -0.63
CTNNA1-215ENST00000519309 ADM5C9JUS6 153 aa11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 PSMD14O00487 310 aa11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 PKN2Q16513 984 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 DLK2Q6UY11 383 aa11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 RASAL3Q86YV0 1011 aa11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 CSRNP1Q96S65 589 aa11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
CTNNA1-215ENST00000519309 PDIA6Q15084 440 aa11.13□□□□□ -0.63
CTNNA1-215ENST00000519309 TBC1D10BQ4KMP7 808 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-215ENST00000519309 NOM1Q5C9Z4 860 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-215ENST00000519309 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
CTNNA1-215ENST00000519309 ZBTB12Q9Y330 459 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-215ENST00000519309 SH3TC1Q8TE82 1336 aa11.12□□□□□ -0.63
CTNNA1-215ENST00000519309 FKBP1BP68106 108 aa11.12□□□□□ -0.63
CTNNA1-215ENST00000519309 KIF4BQ2VIQ3 1234 aa11.12□□□□□ -0.63
CTNNA1-215ENST00000519309 HSP90AB3PQ58FF7 597 aa11.12□□□□□ -0.63
CTNNA1-215ENST00000519309 DDX46Q7L014 1031 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-215ENST00000519309 NLRP10Q86W26 655 aa11.12□□□□□ -0.63
CTNNA1-215ENST00000519309 DCPSQ96C86 337 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-215ENST00000519309 GGA3Q9NZ52 723 aa11.12□□□□□ -0.63
CTNNA1-215ENST00000519309 MKI67P46013 3256 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-215ENST00000519309 ECE2O60344 883 aa11.11□□□□□ -0.63
CTNNA1-215ENST00000519309 HCLS1P14317 486 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-215ENST00000519309 WASHC4Q2M389 1173 aa11.11□□□□□ -0.63
CTNNA1-215ENST00000519309 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
CTNNA1-215ENST00000519309 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
CTNNA1-215ENST00000519309 DBNDD1Q9H9R9 158 aa11.11□□□□□ -0.63
CTNNA1-215ENST00000519309 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
CTNNA1-215ENST00000519309 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
CTNNA1-215ENST00000519309 CFHR5Q9BXR6 569 aa11.1□□□□□ -0.63
CTNNA1-215ENST00000519309 KCNA4P22459 653 aa11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 NFE2L2Q16236 605 aa11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 PROSER3Q2NL68 480 aa11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 FBXO46Q6PJ61 603 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 ZNF296Q8WUU4 475 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 KIAA0100Q14667 2235 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
CTNNA1-215ENST00000519309 VIL1P09327 827 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms