RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 PCDHB9Q9Y5E1 797 aa9.58□□□□□ -0.88
CCDC6-203ENST00000518638 ZFYVE9O95405 1425 aa9.57□□□□□ -0.88
CCDC6-203ENST00000518638 EIF4G2P78344 907 aaKnown RBP eCLIP9.57□□□□□ -0.88
CCDC6-203ENST00000518638 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
CCDC6-203ENST00000518638 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.57□□□□□ -0.88
CCDC6-203ENST00000518638 TBX22Q9Y458 520 aa9.57□□□□□ -0.88
CCDC6-203ENST00000518638 NHSL1Q5SYE7 1610 aa9.56□□□□□ -0.88
CCDC6-203ENST00000518638 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
CCDC6-203ENST00000518638 LRRC59Q96AG4 307 aaKnown RBP9.56□□□□□ -0.88
CCDC6-203ENST00000518638 ASXL1Q8IXJ9 1541 aa9.56□□□□□ -0.88
CCDC6-203ENST00000518638 PIK3R2O00459 728 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 SOX11P35716 441 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 WDR44Q5JSH3 913 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
CCDC6-203ENST00000518638 BRINP3Q76B58 766 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 KRTAP1-3Q8IUG1 177 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 NBPF15Q8N660 670 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 CFHR5Q9BXR6 569 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 ZMYND15Q9H091 742 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
CCDC6-203ENST00000518638 TRPM2O94759 1503 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 GCC2Q8IWJ2 1684 aa9.55□□□□□ -0.88
CCDC6-203ENST00000518638 A0A1W2PRU2 124 aa9.54□□□□□ -0.88
CCDC6-203ENST00000518638 F11P03951 625 aa9.54□□□□□ -0.88
CCDC6-203ENST00000518638 EDARADDQ8WWZ3 215 aa9.54□□□□□ -0.88
CCDC6-203ENST00000518638 C8orf37Q96NL8 207 aa9.54□□□□□ -0.88
CCDC6-203ENST00000518638 NLRP3Q96P20 1036 aa9.54□□□□□ -0.88
CCDC6-203ENST00000518638 PHF24Q9UPV7 400 aa9.54□□□□□ -0.88
CCDC6-203ENST00000518638 RIMS2Q9UQ26 1411 aa9.54□□□□□ -0.88
CCDC6-203ENST00000518638 GOLGA6L1Q8N7Z2 621 aa9.53□□□□□ -0.88
CCDC6-203ENST00000518638 KLRG1Q96E93 195 aa9.53□□□□□ -0.88
CCDC6-203ENST00000518638 TIMMDC1Q9NPL8 285 aa9.53□□□□□ -0.88
CCDC6-203ENST00000518638 MYO5BQ9ULV0 1848 aa9.52□□□□□ -0.89
CCDC6-203ENST00000518638 POM121CA8CG34 1229 aa9.52□□□□□ -0.89
CCDC6-203ENST00000518638 C1QTNF9BB2RNN3 333 aa9.52□□□□□ -0.89
CCDC6-203ENST00000518638 SPATA31C2B4DYI2 1134 aa9.52□□□□□ -0.89
CCDC6-203ENST00000518638 C1orf229Q6ZS94 237 aaPredicted RBP9.52□□□□□ -0.89
CCDC6-203ENST00000518638 SUV39H2Q9H5I1 410 aa9.52□□□□□ -0.89
CCDC6-203ENST00000518638 TMEM131LA2VDJ0 1609 aa9.52□□□□□ -0.89
CCDC6-203ENST00000518638 PTPN23Q9H3S7 1636 aa9.52□□□□□ -0.89
CCDC6-203ENST00000518638 PNPLA6Q8IY17 1366 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 ANKRD30AQ9BXX3 1397 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 SETBP1Q9Y6X0 1596 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 TRAK2O60296 914 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 AMPD1P23109 780 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 HOMEZQ8IX15 550 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 GRIP2Q9C0E4 1043 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 ALG2Q9H553 416 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 RRP7BPQ9NSQ0 103 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 TRPC5Q9UL62 973 aaPredicted RBP9.51□□□□□ -0.89
CCDC6-203ENST00000518638 LRP5O75197 1615 aa9.51□□□□□ -0.89
CCDC6-203ENST00000518638 ADAMTS13Q76LX8 1427 aa9.5□□□□□ -0.89
CCDC6-203ENST00000518638 GNB5O14775 395 aa9.5□□□□□ -0.89
CCDC6-203ENST00000518638 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
CCDC6-203ENST00000518638 CLN3Q13286 438 aa9.5□□□□□ -0.89
CCDC6-203ENST00000518638 LINC00114Q6XXX2 140 aa9.5□□□□□ -0.89
CCDC6-203ENST00000518638 TAS1R3Q7RTX0 852 aa9.5□□□□□ -0.89
CCDC6-203ENST00000518638 CD163Q86VB7 1156 aa9.5□□□□□ -0.89
CCDC6-203ENST00000518638 ABCC5O15440 1437 aa9.49□□□□□ -0.89
CCDC6-203ENST00000518638 DAPK1P53355 1430 aa9.49□□□□□ -0.89
CCDC6-203ENST00000518638 MST1RQ04912 1400 aa9.49□□□□□ -0.89
CCDC6-203ENST00000518638 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
CCDC6-203ENST00000518638 WASLO00401 505 aaPredicted RBP9.49□□□□□ -0.89
CCDC6-203ENST00000518638 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
CCDC6-203ENST00000518638 ITGB7P26010 798 aa9.49□□□□□ -0.89
CCDC6-203ENST00000518638 ZMYM1Q5SVZ6 1142 aa9.49□□□□□ -0.89
CCDC6-203ENST00000518638 CEP126Q9P2H0 1117 aa9.49□□□□□ -0.89
CCDC6-203ENST00000518638 XRN1Q8IZH2 1706 aaKnown RBP9.48□□□□□ -0.89
CCDC6-203ENST00000518638 HOXB4P17483 251 aaPredicted RBP9.48□□□□□ -0.89
CCDC6-203ENST00000518638 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
CCDC6-203ENST00000518638 SEMA6BQ9H3T3 888 aa9.48□□□□□ -0.89
CCDC6-203ENST00000518638 USP21Q9UK80 565 aa9.48□□□□□ -0.89
CCDC6-203ENST00000518638 LAMC1P11047 1609 aa9.48□□□□□ -0.89
CCDC6-203ENST00000518638 CHRNA4P43681 627 aa9.47□□□□□ -0.89
CCDC6-203ENST00000518638 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
CCDC6-203ENST00000518638 CC2D2BQ6DHV5 1058 aa9.47□□□□□ -0.89
CCDC6-203ENST00000518638 SLCO4C1Q6ZQN7 724 aa9.47□□□□□ -0.89
CCDC6-203ENST00000518638 CYP2U1Q7Z449 544 aa9.47□□□□□ -0.89
CCDC6-203ENST00000518638 ADAMTS19Q8TE59 1207 aa9.47□□□□□ -0.89
CCDC6-203ENST00000518638 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
CCDC6-203ENST00000518638 VPS8Q8N3P4 1428 aa9.47□□□□□ -0.89
CCDC6-203ENST00000518638 UNC13BO14795 1591 aa9.46□□□□□ -0.89
CCDC6-203ENST00000518638 THBS1P07996 1170 aa9.46□□□□□ -0.9
CCDC6-203ENST00000518638 GPAMQ9HCL2 828 aa9.46□□□□□ -0.9
CCDC6-203ENST00000518638 AMOTL2Q9Y2J4 779 aa9.46□□□□□ -0.9
CCDC6-203ENST00000518638 ATRNO75882 1429 aa9.46□□□□□ -0.9
CCDC6-203ENST00000518638 BLMP54132 1417 aaPredicted RBP9.46□□□□□ -0.9
CCDC6-203ENST00000518638 ADGRL3Q9HAR2 1447 aa9.46□□□□□ -0.9
CCDC6-203ENST00000518638 SPHKAPQ2M3C7 1700 aa9.45□□□□□ -0.9
CCDC6-203ENST00000518638 SRCAPQ6ZRS2 3230 aa9.45□□□□□ -0.9
CCDC6-203ENST00000518638 PHTF2Q8N3S3 785 aa9.45□□□□□ -0.9
CCDC6-203ENST00000518638 IQGAP3Q86VI3 1631 aa9.45□□□□□ -0.9
CCDC6-203ENST00000518638 COL22A1Q8NFW1 1626 aaPredicted RBP9.45□□□□□ -0.9
CCDC6-203ENST00000518638 BMP4P12644 408 aa9.44□□□□□ -0.9
CCDC6-203ENST00000518638 SF3B2Q13435 895 aaKnown RBP9.44□□□□□ -0.9
CCDC6-203ENST00000518638 LBRQ14739 615 aaKnown RBP9.44□□□□□ -0.9
CCDC6-203ENST00000518638 SLFNL1Q499Z3 407 aa9.44□□□□□ -0.9
CCDC6-203ENST00000518638 LCE3BQ5TA77 95 aa9.44□□□□□ -0.9
CCDC6-203ENST00000518638 HDGFL1Q5TGJ6 251 aa9.44□□□□□ -0.9
CCDC6-203ENST00000518638 GLMNQ92990 594 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms