RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 SEPT9Q9UHD8 586 aaPredicted RBP12.82□□□□□ -0.36
TTC1-202ENST00000518560 SERPINB2P05120 415 aa12.81□□□□□ -0.36
TTC1-202ENST00000518560 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
TTC1-202ENST00000518560 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
TTC1-202ENST00000518560 GPBP1L1Q9HC44 474 aaPredicted RBP12.81□□□□□ -0.36
TTC1-202ENST00000518560 TIAM2Q8IVF5 1701 aa12.8□□□□□ -0.36
TTC1-202ENST00000518560 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.8□□□□□ -0.36
TTC1-202ENST00000518560 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
TTC1-202ENST00000518560 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
TTC1-202ENST00000518560 CAMTA2O94983 1202 aa12.79□□□□□ -0.36
TTC1-202ENST00000518560 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
TTC1-202ENST00000518560 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
TTC1-202ENST00000518560 EPAS1Q99814 870 aa12.79□□□□□ -0.36
TTC1-202ENST00000518560 TEX13AQ9BXU3 409 aaPredicted RBP12.79□□□□□ -0.36
TTC1-202ENST00000518560 A0A087WZG4 1122 aa12.78□□□□□ -0.36
TTC1-202ENST00000518560 GFRA3O60609 400 aa12.78□□□□□ -0.36
TTC1-202ENST00000518560 RASSF7Q02833 373 aa12.78□□□□□ -0.36
TTC1-202ENST00000518560 DALRD3Q5D0E6 543 aaKnown RBP12.78□□□□□ -0.36
TTC1-202ENST00000518560 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
TTC1-202ENST00000518560 DZIP3Q86Y13 1208 aaKnown RBP12.78□□□□□ -0.36
TTC1-202ENST00000518560 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
TTC1-202ENST00000518560 ARFGEF2Q9Y6D5 1785 aa12.78□□□□□ -0.36
TTC1-202ENST00000518560 NUP98P52948 1817 aa12.78□□□□□ -0.36
TTC1-202ENST00000518560 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.36
TTC1-202ENST00000518560 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
TTC1-202ENST00000518560 SNRPA1P09661 255 aaKnown RBP12.77□□□□□ -0.37
TTC1-202ENST00000518560 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
TTC1-202ENST00000518560 C9orf131Q5VYM1 1079 aa12.77□□□□□ -0.37
TTC1-202ENST00000518560 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
TTC1-202ENST00000518560 NBPF10Q6P3W6 841 aaKnown RBP12.77□□□□□ -0.37
TTC1-202ENST00000518560 TRAF7Q6Q0C0 670 aa12.77□□□□□ -0.37
TTC1-202ENST00000518560 C2CD5Q86YS7 1000 aa12.77□□□□□ -0.37
TTC1-202ENST00000518560 NBPF15Q8N660 670 aa12.77□□□□□ -0.37
TTC1-202ENST00000518560 SLX4Q8IY92 1834 aa12.76□□□□□ -0.37
TTC1-202ENST00000518560 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
TTC1-202ENST00000518560 HTATSF1O43719 755 aaKnown RBP12.76□□□□□ -0.37
TTC1-202ENST00000518560 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
TTC1-202ENST00000518560 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
TTC1-202ENST00000518560 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
TTC1-202ENST00000518560 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
TTC1-202ENST00000518560 NEFMP07197 916 aa12.75□□□□□ -0.37
TTC1-202ENST00000518560 PRELPP51888 382 aa12.75□□□□□ -0.37
TTC1-202ENST00000518560 NMRK2Q9NPI5 230 aa12.75□□□□□ -0.37
TTC1-202ENST00000518560 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
TTC1-202ENST00000518560 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
TTC1-202ENST00000518560 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
TTC1-202ENST00000518560 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
TTC1-202ENST00000518560 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
TTC1-202ENST00000518560 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
TTC1-202ENST00000518560 RALBP1Q15311 655 aa12.73□□□□□ -0.37
TTC1-202ENST00000518560 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
TTC1-202ENST00000518560 NGEFQ8N5V2 710 aa12.73□□□□□ -0.37
TTC1-202ENST00000518560 CNBD1Q8NA66 436 aa12.73□□□□□ -0.37
TTC1-202ENST00000518560 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
TTC1-202ENST00000518560 H0YIN7 160 aa12.72□□□□□ -0.37
TTC1-202ENST00000518560 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
TTC1-202ENST00000518560 HLFQ16534 295 aa12.72□□□□□ -0.37
TTC1-202ENST00000518560 TTLL6Q8N841 843 aa12.72□□□□□ -0.37
TTC1-202ENST00000518560 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
TTC1-202ENST00000518560 NFKBIEO00221 500 aa12.71□□□□□ -0.37
TTC1-202ENST00000518560 NPHP1O15259 732 aa12.71□□□□□ -0.37
TTC1-202ENST00000518560 MYL6BP14649 208 aa12.71□□□□□ -0.37
TTC1-202ENST00000518560 RIPK4P57078 832 aa12.71□□□□□ -0.37
TTC1-202ENST00000518560 BRIP1Q9BX63 1249 aa12.71□□□□□ -0.37
TTC1-202ENST00000518560 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.38
TTC1-202ENST00000518560 C21orf2O43822 256 aa12.7□□□□□ -0.38
TTC1-202ENST00000518560 TMPOP42166 694 aaKnown RBP12.7□□□□□ -0.38
TTC1-202ENST00000518560 PPP4CP60510 307 aa12.7□□□□□ -0.38
TTC1-202ENST00000518560 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
TTC1-202ENST00000518560 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
TTC1-202ENST00000518560 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
TTC1-202ENST00000518560 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
TTC1-202ENST00000518560 PDE6BP35913 854 aa12.69□□□□□ -0.38
TTC1-202ENST00000518560 ST5P78524 1137 aa12.69□□□□□ -0.38
TTC1-202ENST00000518560 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
TTC1-202ENST00000518560 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
TTC1-202ENST00000518560 PNISRQ8TF01 805 aaKnown RBP12.69□□□□□ -0.38
TTC1-202ENST00000518560 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
TTC1-202ENST00000518560 ANXA1P04083 346 aa12.68□□□□□ -0.38
TTC1-202ENST00000518560 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
TTC1-202ENST00000518560 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
TTC1-202ENST00000518560 ZNF652Q9Y2D9 606 aa12.68□□□□□ -0.38
TTC1-202ENST00000518560 LAMB2P55268 1798 aa12.68□□□□□ -0.38
TTC1-202ENST00000518560 WDR90Q96KV7 1748 aa12.68□□□□□ -0.38
TTC1-202ENST00000518560 SRGNP10124 158 aa12.67□□□□□ -0.38
TTC1-202ENST00000518560 HSPA6P17066 643 aa12.67□□□□□ -0.38
TTC1-202ENST00000518560 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
TTC1-202ENST00000518560 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
TTC1-202ENST00000518560 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
TTC1-202ENST00000518560 NECTIN2Q92692 538 aa12.67□□□□□ -0.38
TTC1-202ENST00000518560 PRKD2Q9BZL6 878 aa12.67□□□□□ -0.38
TTC1-202ENST00000518560 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
TTC1-202ENST00000518560 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
TTC1-202ENST00000518560 UBN2Q6ZU65 1347 aa12.66□□□□□ -0.38
TTC1-202ENST00000518560 EIF2S2P20042 333 aaKnown RBP12.66□□□□□ -0.38
TTC1-202ENST00000518560 LMNB1P20700 586 aa12.66□□□□□ -0.38
TTC1-202ENST00000518560 GPTP24298 496 aa12.66□□□□□ -0.38
TTC1-202ENST00000518560 WDR43Q15061 677 aaKnown RBP eCLIP12.66□□□□□ -0.38
TTC1-202ENST00000518560 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
TTC1-202ENST00000518560 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms