RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 FILIP1Q7Z7B0 1213 aa14.58□□□□□ -0.08
PCM1-203ENST00000517545 EDC3Q96F86 508 aaKnown RBP14.58□□□□□ -0.08
PCM1-203ENST00000517545 SLC26A8Q96RN1 970 aa14.58□□□□□ -0.08
PCM1-203ENST00000517545 FSD1Q9BTV5 496 aa14.58□□□□□ -0.08
PCM1-203ENST00000517545 GOLGA6L19H0YKK7 550 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 SKILP12757 684 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 FOSBP53539 338 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 ANKRD1Q15327 319 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 MAP3K2Q9Y2U5 619 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 NWD1Q149M9 1564 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 ADAMTS13Q76LX8 1427 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 GABPB1Q06547 395 aaPredicted RBP14.57□□□□□ -0.08
PCM1-203ENST00000517545 CDC25BP30305 580 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 HDGFP51858 240 aaKnown RBP14.57□□□□□ -0.08
PCM1-203ENST00000517545 PTPN14Q15678 1187 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 PROSER3Q2NL68 480 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 NYAP1Q6ZVC0 841 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 ERCC4Q92889 916 aaPredicted RBP14.57□□□□□ -0.08
PCM1-203ENST00000517545 SIL1Q9H173 461 aa14.57□□□□□ -0.08
PCM1-203ENST00000517545 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
PCM1-203ENST00000517545 ELF2Q15723 593 aa14.56□□□□□ -0.08
PCM1-203ENST00000517545 RNF20Q5VTR2 975 aa14.56□□□□□ -0.08
PCM1-203ENST00000517545 RBM6P78332 1123 aaKnown RBP14.56□□□□□ -0.08
PCM1-203ENST00000517545 FBXW7Q969H0 707 aa14.56□□□□□ -0.08
PCM1-203ENST00000517545 ADGRL3Q9HAR2 1447 aa14.56□□□□□ -0.08
PCM1-203ENST00000517545 CCDC69A6NI79 296 aa14.56□□□□□ -0.08
PCM1-203ENST00000517545 NPHP1O15259 732 aa14.56□□□□□ -0.08
PCM1-203ENST00000517545 CHGBP05060 677 aa14.56□□□□□ -0.08
PCM1-203ENST00000517545 FBXO38Q6PIJ6 1188 aa14.56□□□□□ -0.08
PCM1-203ENST00000517545 CCZ1BP86790 482 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 CCZ1P86791 482 aaPredicted RBP14.55□□□□□ -0.08
PCM1-203ENST00000517545 SARM1Q6SZW1 724 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 ERC1Q8IUD2 1116 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 KLHDC4Q8TBB5 520 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 GTF3C6Q969F1 213 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 LRRC2Q9BYS8 371 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 GOLPH3LQ9H4A5 285 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 ST7Q9NRC1 585 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 H3BQV1 296 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 LTKP29376 864 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 IFFO2Q5TF58 517 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 ZNF397Q8NF99 534 aaPredicted RBP14.55□□□□□ -0.08
PCM1-203ENST00000517545 KAZALD1Q96I82 304 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 SNRKQ9NRH2 765 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 ERBB3P21860 1342 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 TMEM2Q9UHN6 1383 aa14.55□□□□□ -0.08
PCM1-203ENST00000517545 HIP1O00291 1037 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 TERF2Q15554 542 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 MRFAP1L1Q96HT8 127 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 SUCLG2Q96I99 432 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 CEMIPQ8WUJ3 1361 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 MED23Q9ULK4 1368 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 CHD2O14647 1828 aaKnown RBP14.54□□□□□ -0.08
PCM1-203ENST00000517545 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 KRT222Q8N1A0 295 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 CCAR1Q8IX12 1150 aaKnown RBP14.54□□□□□ -0.08
PCM1-203ENST00000517545 DHX40Q8IX18 779 aaKnown RBP14.54□□□□□ -0.08
PCM1-203ENST00000517545 SYTL4Q96C24 671 aaPredicted RBP14.54□□□□□ -0.08
PCM1-203ENST00000517545 BICC1Q9H694 974 aaKnown RBP14.54□□□□□ -0.08
PCM1-203ENST00000517545 COL15A1P39059 1388 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 PTPRUQ92729 1446 aa14.54□□□□□ -0.08
PCM1-203ENST00000517545 AGLP35573 1532 aa14.53□□□□□ -0.08
PCM1-203ENST00000517545 BECN2A8MW95 431 aa14.53□□□□□ -0.08
PCM1-203ENST00000517545 ZBTB22O15209 634 aa14.53□□□□□ -0.08
PCM1-203ENST00000517545 TAF5LO75529 589 aa14.53□□□□□ -0.08
PCM1-203ENST00000517545 HSP90B1P14625 803 aaKnown RBP14.53□□□□□ -0.08
PCM1-203ENST00000517545 ALDH8A1Q9H2A2 487 aaPredicted RBP14.53□□□□□ -0.08
PCM1-203ENST00000517545 PRAMEF22A3QJZ6 481 aa14.53□□□□□ -0.08
PCM1-203ENST00000517545 GIGYF1O75420 1035 aaPredicted RBP14.53□□□□□ -0.08
PCM1-203ENST00000517545 ADD1P35611 737 aaKnown RBP14.53□□□□□ -0.08
PCM1-203ENST00000517545 G3BP1Q13283 466 aaKnown RBP eCLIP14.53□□□□□ -0.08
PCM1-203ENST00000517545 STX1AQ16623 288 aa14.53□□□□□ -0.08
PCM1-203ENST00000517545 Q6ZUG5 572 aa14.53□□□□□ -0.08
PCM1-203ENST00000517545 CCAR2Q8N163 923 aaKnown RBP14.53□□□□□ -0.08
PCM1-203ENST00000517545 PIK3C2AO00443 1686 aa14.52□□□□□ -0.08
PCM1-203ENST00000517545 CAVIN2O95810 425 aa14.52□□□□□ -0.08
PCM1-203ENST00000517545 CCDC129Q6ZRS4 1044 aa14.52□□□□□ -0.08
PCM1-203ENST00000517545 BTBD11A6QL63 1104 aa14.52□□□□□ -0.09
PCM1-203ENST00000517545 SNW1Q13573 536 aaKnown RBP14.52□□□□□ -0.09
PCM1-203ENST00000517545 HOXB7P09629 217 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 SCRN1Q12765 414 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 MPRIPQ6WCQ1 1025 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 LRRN4CLQ8ND94 238 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 NEK1Q96PY6 1258 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 ZNF446Q9NWS9 450 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 CFAP45Q9UL16 551 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 NEMFO60524 1076 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 AOPEPQ8N6M6 819 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 ERO1AQ96HE7 468 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 HMG20BQ9P0W2 317 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 DBF4Q9UBU7 674 aaPredicted RBP14.51□□□□□ -0.09
PCM1-203ENST00000517545 ALDH1L1O75891 902 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 TSGA10IPQ3SY00 556 aa14.51□□□□□ -0.09
PCM1-203ENST00000517545 NBPF6Q5VWK0 638 aa14.5□□□□□ -0.09
PCM1-203ENST00000517545 KSR2Q6VAB6 950 aa14.5□□□□□ -0.09
PCM1-203ENST00000517545 NBPF4Q96M43 638 aa14.5□□□□□ -0.09
PCM1-203ENST00000517545 USP28Q96RU2 1077 aa14.5□□□□□ -0.09
PCM1-203ENST00000517545 SEC62Q99442 399 aaKnown RBP14.5□□□□□ -0.09
PCM1-203ENST00000517545 AMOTL2Q9Y2J4 779 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms