RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 ANGEL1Q9UNK9 670 aaKnown RBP2.8□□□□□ -1.96
RNU6-1258P-201ENST00000516911 ARID1BQ8NFD5 2236 aaPredicted RBP2.8□□□□□ -1.96
RNU6-1258P-201ENST00000516911 ATAD2Q6PL18 1390 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 F8W735 103 aaPredicted RBP2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 DLL1O00548 723 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 HIRAP54198 1017 aaPredicted RBP2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 GPLD1P80108 840 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 IER5Q5VY09 327 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 FAM117BQ6P1L5 589 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 HFE2Q6ZVN8 426 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 NFATC2IPQ8NCF5 419 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 TRPM4Q8TD43 1214 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 SCG3Q8WXD2 468 aaKnown RBP2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 SPACA7Q96KW9 195 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 HINFPQ9BQA5 517 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 KCNF1Q9H3M0 494 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 NAGPAQ9UK23 515 aa2.79□□□□□ -1.96
RNU6-1258P-201ENST00000516911 PALM3A6NDB9 673 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 USP17L5A8MUK1 530 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 KIAA1324LA8MWY0 1029 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 TGFBR3LH3BV60 316 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 PIK3CDO00329 1044 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 SASH3O75995 380 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 MAP3K6O95382 1288 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 MED26O95402 600 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 TARSP26639 723 aaKnown RBP2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 ARSDP51689 593 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 EPHA4P54764 986 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 PLAURQ03405 335 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 NFIAQ12857 509 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 AGGF1Q8N302 714 aaeCLIP2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 LARGE2Q8N3Y3 721 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 PLD4Q96BZ4 506 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 DBNDD2Q9BQY9 259 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 C11orf16Q9NQ32 467 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 ATG3Q9NT62 314 aa2.78□□□□□ -1.96
RNU6-1258P-201ENST00000516911 LOC102724428A0A0B4J2F2 783 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 M0R2N6 131 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 RAD21O60216 631 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 DEAF1O75398 565 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 IDH3AP50213 366 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 NRLP54845 237 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 SIK1P57059 783 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 GRIK5Q16478 980 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 RTN1Q16799 776 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 UVSSAQ2YD98 709 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 RNF43Q68DV7 783 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 ACAD11Q709F0 780 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 TP53INP2Q8IXH6 220 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 OGFOD1Q8N543 542 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 MKRN1Q9UHC7 482 aaKnown RBP2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 PPME1Q9Y570 386 aa2.77□□□□□ -1.97
RNU6-1258P-201ENST00000516911 ZBTB42B2RXF5 422 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 J3QW42 95 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 RXRBP28702 533 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 PKN1Q16512 942 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 DUOXA2Q1HG44 320 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 LARP1Q6PKG0 1096 aaKnown RBP2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 DTX1Q86Y01 620 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 ZDHHC13Q8IUH4 622 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 CLEC10AQ8IUN9 316 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 TRIM42Q8IWZ5 723 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 CMTR1Q8N1G2 835 aaKnown RBP2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 STAG2Q8N3U4 1231 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 TSEN2Q8NCE0 465 aaKnown RBP2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 BCANQ96GW7 911 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 ZNF594Q96JF6 807 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 C2orf49Q9BVC5 232 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 TLR7Q9NYK1 1049 aaKnown RBP2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 LEMD3Q9Y2U8 911 aa2.76□□□□□ -1.97
RNU6-1258P-201ENST00000516911 HMX2A2RU54 273 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 WDR64B1ANS9 1081 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 LINC01387J3KSC0 135 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 ZBTB7BO15156 539 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 GAS2O43903 313 aaKnown RBP2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 XYLBO75191 536 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 SMNDC1O75940 238 aaKnown RBP eCLIP2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 MICAL2O94851 1124 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 SPINK2P20155 84 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 RASA1P20936 1047 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 CD68P34810 354 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 SEC13P55735 322 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 JAG1P78504 1218 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 OGFOD2Q6N063 350 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 BEND4Q6ZU67 534 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 ILDR2Q71H61 639 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 SHKBP1Q8TBC3 707 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 IFT43Q96FT9 208 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 FBXL18Q96ME1 805 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 NSUN5Q96P11 429 aaKnown RBP2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 UBL7Q96S82 380 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 FAM83CQ9BQN1 747 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 OSBPL1AQ9BXW6 950 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 C7orf69Q9H7B7 122 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 ADGRE2Q9UHX3 823 aa2.75□□□□□ -1.97
RNU6-1258P-201ENST00000516911 USP17L3A6NCW0 530 aa2.74□□□□□ -1.97
RNU6-1258P-201ENST00000516911 USP17L4A6NCW7 530 aa2.74□□□□□ -1.97
RNU6-1258P-201ENST00000516911 BIN1O00499 593 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms