RNA–Protein interactions for RNA: ENST00000516530.1

RNU6-1061P-201, Transcript of RNA, U6 small nuclear 1061, pseudogene, humanhuman

BASIC

Gene RNU6-1061P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1061P-201ENST00000516530 ARID4AP29374 1257 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 SOX11P35716 441 aa3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 CPSF6Q16630 551 aaKnown RBP eCLIP3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 SH3PXD2AQ5TCZ1 1133 aa3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 ARMC10Q8N2F6 343 aa3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 STAG2Q8N3U4 1231 aa3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 FAM46AQ96IP4 442 aaKnown RBP3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 FBXL18Q96ME1 805 aa3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 PHACTR1Q9C0D0 580 aa3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 MUC3BQ9H195 1237 aa3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 CHMP3Q9Y3E7 222 aa3.66□□□□□ -1.82
RNU6-1061P-201ENST00000516530 NRLP54845 237 aa3.65□□□□□ -1.83
RNU6-1061P-201ENST00000516530 GTF2IP78347 998 aa3.65□□□□□ -1.83
RNU6-1061P-201ENST00000516530 PLAURQ03405 335 aa3.65□□□□□ -1.83
RNU6-1061P-201ENST00000516530 SETDB1Q15047 1291 aa3.65□□□□□ -1.83
RNU6-1061P-201ENST00000516530 CLEC10AQ8IUN9 316 aa3.65□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TRIM42Q8IWZ5 723 aa3.65□□□□□ -1.83
RNU6-1061P-201ENST00000516530 NOD1Q9Y239 953 aa3.65□□□□□ -1.83
RNU6-1061P-201ENST00000516530 ZBTB42B2RXF5 422 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 M0R2N6 131 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 EPB42P16452 691 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 IRF5Q13568 498 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 MSMPQ1L6U9 139 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 EML3Q32P44 896 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 DHX32Q7L7V1 743 aaKnown RBP3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TNS4Q8IZW8 715 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 NFATC2IPQ8NCF5 419 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 UTP4Q969X6 686 aaKnown RBP3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 MYRFLQ96LU7 910 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 FAM83CQ9BQN1 747 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 SMG9Q9H0W8 520 aaKnown RBP3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 PRM3Q9NNZ6 103 aa3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 ANGEL1Q9UNK9 670 aaKnown RBP3.64□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TGFBR3LH3BV60 316 aa3.63□□□□□ -1.83
RNU6-1061P-201ENST00000516530 HOXD8P13378 290 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1061P-201ENST00000516530 VSIG10LQ86VR7 867 aa3.63□□□□□ -1.83
RNU6-1061P-201ENST00000516530 AGGF1Q8N302 714 aaeCLIP3.63□□□□□ -1.83
RNU6-1061P-201ENST00000516530 SHKBP1Q8TBC3 707 aa3.63□□□□□ -1.83
RNU6-1061P-201ENST00000516530 PIM2Q9P1W9 311 aa3.63□□□□□ -1.83
RNU6-1061P-201ENST00000516530 DMGDHQ9UI17 866 aaKnown RBP3.63□□□□□ -1.83
RNU6-1061P-201ENST00000516530 HCN4Q9Y3Q4 1203 aa3.63□□□□□ -1.83
RNU6-1061P-201ENST00000516530 HMX2A2RU54 273 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TBCELQ5QJ74 424 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 NFXL1Q6ZNB6 911 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 FAM20CQ8IXL6 584 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 ALDH16A1Q8IZ83 802 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 SNRKQ9NRH2 765 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 ZFATQ9P243 1243 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TBC1D2BQ9UPU7 963 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 HIF3AQ9Y2N7 669 aa3.62□□□□□ -1.83
RNU6-1061P-201ENST00000516530 FOSL1P15407 271 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 INPP5BP32019 993 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 PSME1Q06323 249 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 WASHC4Q2M389 1173 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 IL22RA1Q8N6P7 574 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 GIMAP7Q8NHV1 300 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 GAS2L2Q8NHY3 880 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 PLD4Q96BZ4 506 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TSPAN10Q9H1Z9 355 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 CCDC39Q9UFE4 941 aa3.61□□□□□ -1.83
RNU6-1061P-201ENST00000516530 GRNP28799 593 aaKnown RBP3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 KRTAP1-1Q07627 177 aa3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 RTN1Q16799 776 aa3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TRIM50Q86XT4 487 aa3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 AGBL5Q8NDL9 886 aa3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 BHLHE22Q8NFJ8 381 aaPredicted RBP3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 IFT43Q96FT9 208 aa3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TLR7Q9NYK1 1049 aaKnown RBP3.6□□□□□ -1.83
RNU6-1061P-201ENST00000516530 TM4SF5O14894 197 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 FARP2O94887 1054 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 PAPLNO95428 1278 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 EGFRP00533 1210 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 EIF2AK2P19525 551 aaKnown RBP3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 HOXA10P31260 410 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 CD68P34810 354 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 SOX18P35713 384 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 SEMA3FQ13275 785 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 COL19A1Q14993 1142 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 KIAA1211Q6ZU35 1233 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 C2orf49Q9BVC5 232 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 PPME1Q9Y570 386 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 NCANO14594 1321 aa3.59□□□□□ -1.83
RNU6-1061P-201ENST00000516530 LOC102724428A0A0B4J2F2 783 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 WDR64B1ANS9 1081 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 PRRG2O14669 202 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 C21orf2O43822 256 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 PPP1R12BO60237 982 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 RARAP10276 462 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 SIK1P57059 783 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 MLLT1Q03111 559 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 VAC14Q08AM6 782 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 ZNF648Q5T619 568 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 ANKRD34AQ69YU3 496 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 BEND4Q6ZU67 534 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 ACAD11Q709F0 780 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 GALNT11Q8NCW6 608 aa3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 BSDC1Q9NW68 430 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1061P-201ENST00000516530 RAPGEFL1Q9UHV5 662 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms