RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 DDIT3P35638 169 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 TFCP2Q12800 502 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 AOX1Q06278 1338 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 AATKQ6ZMQ8 1374 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 RGS12O14924 1447 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 SMTNL1A8MU46 457 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 IPO7O95373 1038 aaKnown RBP11.92□□□□□ -0.5
SMG7-215ENST00000515829 CCDC70Q6NSX1 233 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 ANKLE2Q86XL3 938 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 MTMR7Q9Y216 660 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 USP16Q9Y5T5 823 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 U2AF2P26368 475 aaKnown RBP eCLIP11.92□□□□□ -0.57e-17■■■■■ 49.3
SMG7-215ENST00000515829 LMBR1LQ6UX01 489 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 TRIM34Q9BYJ4 488 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
SMG7-215ENST00000515829 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 RPS6KB1P23443 525 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 MCMDC2Q4G0Z9 681 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 ERCC4Q92889 916 aaPredicted RBP11.92□□□□□ -0.5
SMG7-215ENST00000515829 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.92□□□□□ -0.53e-6■■■□□ 15.4
SMG7-215ENST00000515829 LSG1Q9H089 658 aaKnown RBP11.92□□□□□ -0.5
SMG7-215ENST00000515829 STAP2Q9UGK3 403 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 TPCN1Q9ULQ1 816 aa11.92□□□□□ -0.5
SMG7-215ENST00000515829 LARGE1O95461 756 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 LRMPQ12912 555 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 SUCLG2Q96I99 432 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 PNPLA6Q8IY17 1366 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 MAPK8IP2Q13387 824 aaPredicted RBP11.91□□□□□ -0.5
SMG7-215ENST00000515829 PAXBP1Q9Y5B6 917 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 CCP110O43303 1012 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
SMG7-215ENST00000515829 TOM1L2Q6ZVM7 507 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 LEO1Q8WVC0 666 aaPredicted RBP11.91□□□□□ -0.5
SMG7-215ENST00000515829 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 PYCARDQ9ULZ3 195 aa11.91□□□□□ -0.5
SMG7-215ENST00000515829 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
SMG7-215ENST00000515829 HSP90AB3PQ58FF7 597 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 NFATC2IPQ8NCF5 419 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 CCDC69A6NI79 296 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 KCNA6P17658 529 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 NCOA5Q9HCD5 579 aaKnown RBP11.9□□□□□ -0.5
SMG7-215ENST00000515829 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 PTPDC1A2A3K4 754 aa11.9□□□□□ -0.5
SMG7-215ENST00000515829 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
SMG7-215ENST00000515829 A0A0D9SFI3 127 aa11.9□□□□□ -0.51
SMG7-215ENST00000515829 NEMFO60524 1076 aa11.9□□□□□ -0.51
SMG7-215ENST00000515829 SKIDA1Q1XH10 827 aa11.9□□□□□ -0.51
SMG7-215ENST00000515829 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.51
SMG7-215ENST00000515829 CLEC17AQ6ZS10 378 aa11.9□□□□□ -0.51
SMG7-215ENST00000515829 ABCC3O15438 1527 aa11.9□□□□□ -0.51
SMG7-215ENST00000515829 ZNF213O14771 459 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 SART3Q15020 963 aaKnown RBP11.89□□□□□ -0.51
SMG7-215ENST00000515829 EAF2Q96CJ1 260 aaPredicted RBP11.89□□□□□ -0.51
SMG7-215ENST00000515829 KLF18A0A0U1RQI7 1052 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 POLR3GO15318 223 aaPredicted RBP11.89□□□□□ -0.51
SMG7-215ENST00000515829 CYP2E1P05181 493 aaPredicted RBP11.89□□□□□ -0.51
SMG7-215ENST00000515829 A0A1B0GVL5 298 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 RNMTO43148 476 aaKnown RBP11.89□□□□□ -0.51
SMG7-215ENST00000515829 CHRNA2Q15822 529 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 METTL24Q5JXM2 366 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
SMG7-215ENST00000515829 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
SMG7-215ENST00000515829 BEND3Q5T5X7 828 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 KLHL10Q6JEL2 608 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
SMG7-215ENST00000515829 SSH2Q76I76 1423 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 CAVIN2O95810 425 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 XBP1P17861 261 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 LTKP29376 864 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 MRPS27Q92552 414 aaKnown RBP11.88□□□□□ -0.51
SMG7-215ENST00000515829 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 ADGRB3O60242 1522 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 ATP7BP35670 1465 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 MLH3Q9UHC1 1453 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 ZNF75DP51815 510 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 OTUD7BQ6GQQ9 843 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 TMCO3Q6UWJ1 677 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 MICU3Q86XE3 530 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 NR1I2O75469 434 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 GSDMDP57764 484 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 TIMM10P62072 90 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 PDLIM2Q96JY6 352 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 CLSTN2Q9H4D0 955 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 MED14O60244 1454 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 CEP152O94986 1710 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 KIF2AO00139 706 aaPredicted RBP11.88□□□□□ -0.51
SMG7-215ENST00000515829 CDKL5O76039 1030 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 PPFIBP1Q86W92 1011 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 CPLX3Q8WVH0 158 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 IP6K1Q92551 441 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
SMG7-215ENST00000515829 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms