RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 COL9A3Q14050 684 aaPredicted RBP17.91■□□□□ 0.46
PCDH1-208ENST00000515351 TSGA10IPQ3SY00 556 aa17.91■□□□□ 0.46
PCDH1-208ENST00000515351 CCDC183Q5T5S1 534 aa17.91■□□□□ 0.46
PCDH1-208ENST00000515351 BLOC1S2Q6QNY1 142 aa17.91■□□□□ 0.46
PCDH1-208ENST00000515351 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
PCDH1-208ENST00000515351 TAF5LO75529 589 aa17.9■□□□□ 0.46
PCDH1-208ENST00000515351 RPS6KB1P23443 525 aa17.9■□□□□ 0.46
PCDH1-208ENST00000515351 NOL7Q9UMY1 257 aaKnown RBP17.9■□□□□ 0.46
PCDH1-208ENST00000515351 FIBPO43427 364 aa17.9■□□□□ 0.46
PCDH1-208ENST00000515351 ANKRD1Q15327 319 aa17.9■□□□□ 0.46
PCDH1-208ENST00000515351 TAF6LQ9Y6J9 622 aa17.9■□□□□ 0.46
PCDH1-208ENST00000515351 PAPPAQ13219 1627 aa17.89■□□□□ 0.46
PCDH1-208ENST00000515351 CSPP1Q1MSJ5 1256 aa17.89■□□□□ 0.45
PCDH1-208ENST00000515351 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
PCDH1-208ENST00000515351 DTNBO60941 627 aa17.89■□□□□ 0.45
PCDH1-208ENST00000515351 PDIA4P13667 645 aaKnown RBP17.89■□□□□ 0.45
PCDH1-208ENST00000515351 NBPF26B4DH59 902 aa17.88■□□□□ 0.45
PCDH1-208ENST00000515351 DNM1Q05193 864 aaKnown RBP17.88■□□□□ 0.45
PCDH1-208ENST00000515351 NBPF14Q5TI25 921 aa17.88■□□□□ 0.45
PCDH1-208ENST00000515351 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
PCDH1-208ENST00000515351 NBPF15Q8N660 670 aa17.88■□□□□ 0.45
PCDH1-208ENST00000515351 LAMA4Q16363 1823 aa17.88■□□□□ 0.45
PCDH1-208ENST00000515351 VPS37CA5D8V6 355 aaPredicted RBP17.88■□□□□ 0.45
PCDH1-208ENST00000515351 LETM1O95202 739 aaPredicted RBP17.88■□□□□ 0.45
PCDH1-208ENST00000515351 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
PCDH1-208ENST00000515351 HAUS7Q99871 368 aa17.88■□□□□ 0.45
PCDH1-208ENST00000515351 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
PCDH1-208ENST00000515351 ZNF609O15014 1411 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 TOB2Q14106 344 aaPredicted RBP17.87■□□□□ 0.45
PCDH1-208ENST00000515351 LMBR1LQ6UX01 489 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 TCEANC2Q96MN5 208 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 PCDH11XQ9BZA7 1347 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 PCDH11YQ9BZA8 1340 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 H7C1W4 665 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 FOXO4P98177 505 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 KCPQ6ZWJ8 1503 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.87■□□□□ 0.45
PCDH1-208ENST00000515351 NDUFB9Q9Y6M9 179 aa17.87■□□□□ 0.45
PCDH1-208ENST00000515351 WDR17Q8IZU2 1322 aa17.86■□□□□ 0.45
PCDH1-208ENST00000515351 LARP1BQ659C4 914 aaKnown RBP17.86■□□□□ 0.45
PCDH1-208ENST00000515351 PDCP20941 246 aa17.86■□□□□ 0.45
PCDH1-208ENST00000515351 KRT32Q14532 448 aa17.86■□□□□ 0.45
PCDH1-208ENST00000515351 DNAJC2Q99543 621 aaKnown RBP17.86■□□□□ 0.45
PCDH1-208ENST00000515351 CCDC39Q9UFE4 941 aa17.86■□□□□ 0.45
PCDH1-208ENST00000515351 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
PCDH1-208ENST00000515351 ZCRB1Q8TBF4 217 aaKnown RBP17.85■□□□□ 0.45
PCDH1-208ENST00000515351 ZNF500O60304 480 aaPredicted RBP17.84■□□□□ 0.45
PCDH1-208ENST00000515351 UVSSAQ2YD98 709 aa17.84■□□□□ 0.45
PCDH1-208ENST00000515351 ZKSCAN5Q9Y2L8 839 aa17.84■□□□□ 0.45
PCDH1-208ENST00000515351 ERVV-2B6SEH9 535 aa17.84■□□□□ 0.45
PCDH1-208ENST00000515351 MCM5P33992 734 aa17.84■□□□□ 0.45
PCDH1-208ENST00000515351 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
PCDH1-208ENST00000515351 CWC25Q9NXE8 425 aaPredicted RBP17.84■□□□□ 0.45
PCDH1-208ENST00000515351 OFD1O75665 1012 aa17.83■□□□□ 0.45
PCDH1-208ENST00000515351 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.45
PCDH1-208ENST00000515351 TPRNQ4KMQ1 711 aa17.83■□□□□ 0.45
PCDH1-208ENST00000515351 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.45
PCDH1-208ENST00000515351 ATG9AQ7Z3C6 839 aa17.83■□□□□ 0.45
PCDH1-208ENST00000515351 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.45
PCDH1-208ENST00000515351 COL5A2P05997 1499 aaPredicted RBP17.83■□□□□ 0.44
PCDH1-208ENST00000515351 DDX46Q7L014 1031 aaKnown RBP17.83■□□□□ 0.44
PCDH1-208ENST00000515351 PRDM11Q9NQV5 511 aa17.83■□□□□ 0.44
PCDH1-208ENST00000515351 CHMP3Q9Y3E7 222 aa17.83■□□□□ 0.44
PCDH1-208ENST00000515351 ABCA3Q99758 1704 aa17.83■□□□□ 0.44
PCDH1-208ENST00000515351 CHGBP05060 677 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 CCDC129Q6ZRS4 1044 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 TOM1L2Q6ZVM7 507 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 KBTBD3Q8NAB2 608 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 NEK1Q96PY6 1258 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 SEC62Q99442 399 aaKnown RBP17.82■□□□□ 0.44
PCDH1-208ENST00000515351 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 SPEF2Q9C093 1822 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 SH3TC1Q8TE82 1336 aa17.82■□□□□ 0.44
PCDH1-208ENST00000515351 A1BGP04217 495 aa17.81■□□□□ 0.44
PCDH1-208ENST00000515351 KRT85P78386 507 aa17.81■□□□□ 0.44
PCDH1-208ENST00000515351 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
PCDH1-208ENST00000515351 GPR108Q9NPR9 543 aa17.81■□□□□ 0.44
PCDH1-208ENST00000515351 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.81■□□□□ 0.44
PCDH1-208ENST00000515351 ELP1O95163 1332 aa17.81■□□□□ 0.44
PCDH1-208ENST00000515351 CYP21A2P08686 494 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 FERMT3Q86UX7 667 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 FUCA2Q9BTY2 467 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 MYH15Q9Y2K3 1946 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 HCLS1P14317 486 aaPredicted RBP17.8■□□□□ 0.44
PCDH1-208ENST00000515351 IL15P40933 162 aaPredicted RBP17.8■□□□□ 0.44
PCDH1-208ENST00000515351 STK3Q13188 491 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 TTC6Q86TZ1 520 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 GTF3C6Q969F1 213 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 TNS2Q63HR2 1409 aa17.8■□□□□ 0.44
PCDH1-208ENST00000515351 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
PCDH1-208ENST00000515351 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
PCDH1-208ENST00000515351 TOGARAM1Q9Y4F4 1720 aa17.79■□□□□ 0.44
PCDH1-208ENST00000515351 TICAM2Q86XR7 235 aa17.79■□□□□ 0.44
PCDH1-208ENST00000515351 ZBTB3Q9H5J0 574 aa17.79■□□□□ 0.44
PCDH1-208ENST00000515351 GIMAP6Q6P9H5 292 aa17.78■□□□□ 0.44
PCDH1-208ENST00000515351 CCDC9Q9Y3X0 531 aaKnown RBP17.78■□□□□ 0.44
PCDH1-208ENST00000515351 GOLIM4O00461 696 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms