RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 PHACTR1Q9C0D0 580 aa8.37□□□□□ -1.07
CAST-243ENST00000515160 ACBD3Q9H3P7 528 aa8.37□□□□□ -1.07
CAST-243ENST00000515160 SPG7Q9UQ90 795 aa8.37□□□□□ -1.07
CAST-243ENST00000515160 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.37□□□□□ -1.07
CAST-243ENST00000515160 RPLP1P05386 114 aaKnown RBP8.36□□□□□ -1.07
CAST-243ENST00000515160 CENPCQ03188 943 aa8.36□□□□□ -1.07
CAST-243ENST00000515160 CFHR5Q9BXR6 569 aa8.36□□□□□ -1.07
CAST-243ENST00000515160 DNAJC25Q9H1X3 360 aa8.36□□□□□ -1.07
CAST-243ENST00000515160 FAM13BQ9NYF5 915 aa8.36□□□□□ -1.07
CAST-243ENST00000515160 UHRF1BP1LA0JNW5 1464 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 EIF1AYO14602 144 aaKnown RBP8.35□□□□□ -1.07
CAST-243ENST00000515160 ORC1Q13415 861 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 C8orf34Q49A92 452 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 TREML1Q86YW5 311 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 SNIP1Q8TAD8 396 aaKnown RBP8.35□□□□□ -1.07
CAST-243ENST00000515160 GPR152Q8TDT2 470 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 NUDT16Q96DE0 195 aaKnown RBP8.35□□□□□ -1.07
CAST-243ENST00000515160 NLRP3Q96P20 1036 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 DNAJC2Q99543 621 aaKnown RBP8.35□□□□□ -1.07
CAST-243ENST00000515160 FHDC1Q9C0D6 1143 aaPredicted RBP8.35□□□□□ -1.07
CAST-243ENST00000515160 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 KIF21BO75037 1637 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 PTPRGP23470 1445 aa8.35□□□□□ -1.07
CAST-243ENST00000515160 ADAMTSL3P82987 1691 aa8.34□□□□□ -1.07
CAST-243ENST00000515160 TNNI2P48788 182 aa8.34□□□□□ -1.07
CAST-243ENST00000515160 C1orf53Q5VUE5 145 aa8.34□□□□□ -1.07
CAST-243ENST00000515160 PPARGC1BQ86YN6 1023 aaKnown RBP8.34□□□□□ -1.07
CAST-243ENST00000515160 NIFKQ9BYG3 293 aaKnown RBP8.34□□□□□ -1.07
CAST-243ENST00000515160 CUEDC1Q9NWM3 386 aaPredicted RBP8.34□□□□□ -1.07
CAST-243ENST00000515160 KDM5BQ9UGL1 1544 aa8.34□□□□□ -1.08
CAST-243ENST00000515160 MEN1O00255 615 aa8.33□□□□□ -1.08
CAST-243ENST00000515160 CTSHP09668 335 aa8.33□□□□□ -1.08
CAST-243ENST00000515160 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
CAST-243ENST00000515160 EIF4BP23588 611 aaKnown RBP8.33□□□□□ -1.08
CAST-243ENST00000515160 GTF2E1P29083 439 aaPredicted RBP8.33□□□□□ -1.08
CAST-243ENST00000515160 GTF2F1P35269 517 aaKnown RBP eCLIP8.33□□□□□ -1.08
CAST-243ENST00000515160 PTGIRP43119 386 aa8.33□□□□□ -1.08
CAST-243ENST00000515160 ZNF654Q8IZM8 581 aa8.33□□□□□ -1.08
CAST-243ENST00000515160 ZNF295-AS1Q8N0V1 137 aa8.33□□□□□ -1.08
CAST-243ENST00000515160 DHX38Q92620 1227 aaKnown RBP8.33□□□□□ -1.08
CAST-243ENST00000515160 IRF7Q92985 503 aa8.33□□□□□ -1.08
CAST-243ENST00000515160 ARMC5Q96C12 935 aa8.33□□□□□ -1.08
CAST-243ENST00000515160 ZSCAN10Q96SZ4 725 aaPredicted RBP8.33□□□□□ -1.08
CAST-243ENST00000515160 GGNBP2Q9H3C7 697 aa8.33□□□□□ -1.08
CAST-243ENST00000515160 PTPRMP28827 1452 aa8.32□□□□□ -1.08
CAST-243ENST00000515160 TEX14Q8IWB6 1497 aa8.32□□□□□ -1.08
CAST-243ENST00000515160 WNT7AO00755 349 aa8.32□□□□□ -1.08
CAST-243ENST00000515160 CPNE3O75131 537 aaKnown RBP8.32□□□□□ -1.08
CAST-243ENST00000515160 DNAJA1P31689 397 aaKnown RBP8.32□□□□□ -1.08
CAST-243ENST00000515160 TMEM214Q6NUQ4 689 aaKnown RBP8.32□□□□□ -1.08
CAST-243ENST00000515160 GIMAP6Q6P9H5 292 aa8.32□□□□□ -1.08
CAST-243ENST00000515160 KDF1Q8NAX2 398 aaPredicted RBP8.32□□□□□ -1.08
CAST-243ENST00000515160 GMLQ99445 158 aa8.32□□□□□ -1.08
CAST-243ENST00000515160 NXF1Q9UBU9 619 aaKnown RBP8.32□□□□□ -1.08
CAST-243ENST00000515160 DDX41Q9UJV9 622 aaKnown RBP8.32□□□□□ -1.08
CAST-243ENST00000515160 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
CAST-243ENST00000515160 PPM1GO15355 546 aaPredicted RBP8.31□□□□□ -1.08
CAST-243ENST00000515160 ARID5AQ03989 594 aa8.31□□□□□ -1.08
CAST-243ENST00000515160 CBLBQ13191 982 aa8.31□□□□□ -1.08
CAST-243ENST00000515160 NOP9Q86U38 636 aaKnown RBP8.31□□□□□ -1.08
CAST-243ENST00000515160 NPAS3Q8IXF0 933 aa8.31□□□□□ -1.08
CAST-243ENST00000515160 MRGPRX2Q96LB1 330 aa8.31□□□□□ -1.08
CAST-243ENST00000515160 LNPKQ9C0E8 428 aa8.31□□□□□ -1.08
CAST-243ENST00000515160 TNIKQ9UKE5 1360 aa8.31□□□□□ -1.08
CAST-243ENST00000515160 PCF11O94913 1555 aaKnown RBP8.31□□□□□ -1.08
CAST-243ENST00000515160 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
CAST-243ENST00000515160 GIPC1O14908 333 aa8.3□□□□□ -1.08
CAST-243ENST00000515160 SMPD1P17405 629 aa8.3□□□□□ -1.08
CAST-243ENST00000515160 NCLP19338 710 aaKnown RBP8.3□□□□□ -1.08
CAST-243ENST00000515160 HIF1AQ16665 826 aa8.3□□□□□ -1.08
CAST-243ENST00000515160 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.3□□□□□ -1.08
CAST-243ENST00000515160 HS2ST1Q7LGA3 356 aa8.3□□□□□ -1.08
CAST-243ENST00000515160 USP48Q86UV5 1035 aa8.3□□□□□ -1.08
CAST-243ENST00000515160 RHBDD1Q8TEB9 315 aa8.3□□□□□ -1.08
CAST-243ENST00000515160 UACAQ9BZF9 1416 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 A6NHS1 94 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 OPLAHO14841 1288 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 MICAL2O94851 1124 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 GMPRP36959 345 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 NNTQ13423 1086 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 ZNF394Q53GI3 561 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 Q6ZVU0 165 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 VPS37DQ86XT2 251 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 C12orf49Q9H741 205 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 IGF1RP08069 1367 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 DISP3Q9P2K9 1392 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 MAGI3Q5TCQ9 1506 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 DISP1Q96F81 1524 aa8.29□□□□□ -1.08
CAST-243ENST00000515160 ALDH1A1P00352 501 aa8.28□□□□□ -1.08
CAST-243ENST00000515160 TXLNAP40222 546 aa8.28□□□□□ -1.08
CAST-243ENST00000515160 RACK1P63244 317 aaKnown RBP8.28□□□□□ -1.08
CAST-243ENST00000515160 PTPN12Q05209 780 aaKnown RBP8.28□□□□□ -1.08
CAST-243ENST00000515160 RHPN1Q8TCX5 695 aa8.28□□□□□ -1.08
CAST-243ENST00000515160 GGT7Q9UJ14 662 aa8.28□□□□□ -1.08
CAST-243ENST00000515160 PCDHGB7Q9Y5F8 929 aa8.28□□□□□ -1.08
CAST-243ENST00000515160 WASF2Q9Y6W5 498 aa8.28□□□□□ -1.08
CAST-243ENST00000515160 USP31Q70CQ4 1352 aa8.27□□□□□ -1.09
CAST-243ENST00000515160 TGFBR3LH3BV60 316 aa8.27□□□□□ -1.09
CAST-243ENST00000515160 RELBQ01201 579 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms