RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 ZNF654Q8IZM8 581 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 CAPN10Q9HC96 672 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 NPHS2Q9NP85 383 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 PRKAG2Q9UGJ0 569 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 PCDHGB7Q9Y5F8 929 aa7.96□□□□□ -1.14
RFC1-216ENST00000514572 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
RFC1-216ENST00000514572 GJA8P48165 433 aa7.95□□□□□ -1.14
RFC1-216ENST00000514572 ZNF787Q6DD87 383 aa7.95□□□□□ -1.14
RFC1-216ENST00000514572 USP48Q86UV5 1035 aa7.95□□□□□ -1.14
RFC1-216ENST00000514572 CMTR1Q8N1G2 835 aaKnown RBP7.95□□□□□ -1.14
RFC1-216ENST00000514572 CNTN3Q9P232 1028 aa7.95□□□□□ -1.14
RFC1-216ENST00000514572 PPP1R1BQ9UD71 204 aaPredicted RBP7.95□□□□□ -1.14
RFC1-216ENST00000514572 UPP2O95045 317 aa7.94□□□□□ -1.14
RFC1-216ENST00000514572 USP17L7P0C7H9 530 aa7.94□□□□□ -1.14
RFC1-216ENST00000514572 TAF1CQ15572 869 aaPredicted RBP7.94□□□□□ -1.14
RFC1-216ENST00000514572 MRPL14Q6P1L8 145 aaKnown RBP7.94□□□□□ -1.14
RFC1-216ENST00000514572 GLIS3Q8NEA6 775 aa7.94□□□□□ -1.14
RFC1-216ENST00000514572 SPATA32Q96LK8 384 aa7.94□□□□□ -1.14
RFC1-216ENST00000514572 PUS7Q96PZ0 661 aaKnown RBP7.94□□□□□ -1.14
RFC1-216ENST00000514572 SUV39H2Q9H5I1 410 aa7.94□□□□□ -1.14
RFC1-216ENST00000514572 TIMMDC1Q9NPL8 285 aa7.94□□□□□ -1.14
RFC1-216ENST00000514572 CUEDC1Q9NWM3 386 aaPredicted RBP7.94□□□□□ -1.14
RFC1-216ENST00000514572 EREGO14944 169 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 XYLBO75191 536 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 BMP2P12643 396 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 EPB42P16452 691 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 KCNQ4P56696 695 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 GNL2Q13823 731 aaKnown RBP7.93□□□□□ -1.14
RFC1-216ENST00000514572 ARSJQ5FYB0 599 aaPredicted RBP7.93□□□□□ -1.14
RFC1-216ENST00000514572 NXPE4Q6UWF7 544 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 DPH6Q7L8W6 267 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 C1orf127Q8N9H9 656 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 C3orf58Q8NDZ4 430 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 BCO2Q9BYV7 579 aa7.93□□□□□ -1.14
RFC1-216ENST00000514572 ABI2Q9NYB9 513 aaPredicted RBP7.93□□□□□ -1.14
RFC1-216ENST00000514572 SOS2Q07890 1332 aaPredicted RBP7.93□□□□□ -1.14
RFC1-216ENST00000514572 POLR3DP05423 398 aaPredicted RBP7.92□□□□□ -1.14
RFC1-216ENST00000514572 FGRP09769 529 aa7.92□□□□□ -1.14
RFC1-216ENST00000514572 GRM2Q14416 872 aa7.92□□□□□ -1.14
RFC1-216ENST00000514572 KIAA0319Q5VV43 1072 aa7.92□□□□□ -1.14
RFC1-216ENST00000514572 ANKRD24Q8TF21 1146 aa7.92□□□□□ -1.14
RFC1-216ENST00000514572 GGT7Q9UJ14 662 aa7.92□□□□□ -1.14
RFC1-216ENST00000514572 TTLL8A6PVC2 850 aa7.91□□□□□ -1.14
RFC1-216ENST00000514572 AVPP01185 164 aa7.91□□□□□ -1.14
RFC1-216ENST00000514572 RHOQP17081 205 aa7.91□□□□□ -1.14
RFC1-216ENST00000514572 NLRP13Q86W25 1043 aa7.91□□□□□ -1.14
RFC1-216ENST00000514572 NLRP8Q86W28 1048 aa7.91□□□□□ -1.14
RFC1-216ENST00000514572 INPP5FQ9Y2H2 1132 aa7.91□□□□□ -1.14
RFC1-216ENST00000514572 CADPSQ9ULU8 1353 aa7.91□□□□□ -1.14
RFC1-216ENST00000514572 EFSO43281 561 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 ATP2B1P20020 1258 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 MAP3K10Q02779 954 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 ARID5AQ03989 594 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 RBL2Q08999 1139 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 PEAR1Q5VY43 1037 aaPredicted RBP7.9□□□□□ -1.14
RFC1-216ENST00000514572 PRPF40BQ6NWY9 871 aaKnown RBP7.9□□□□□ -1.14
RFC1-216ENST00000514572 DHX38Q92620 1227 aaKnown RBP7.9□□□□□ -1.14
RFC1-216ENST00000514572 CEP63Q96MT8 703 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 DNAJC2Q99543 621 aaKnown RBP7.9□□□□□ -1.14
RFC1-216ENST00000514572 NOC4LQ9BVI4 516 aaKnown RBP7.9□□□□□ -1.14
RFC1-216ENST00000514572 ZCCHC2Q9C0B9 1178 aaKnown RBP7.9□□□□□ -1.14
RFC1-216ENST00000514572 LNPKQ9C0E8 428 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 NEUROD4Q9HD90 331 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 BRD7Q9NPI1 651 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 DYRK1BQ9Y463 629 aa7.9□□□□□ -1.14
RFC1-216ENST00000514572 ST8SIA5O15466 376 aa7.89□□□□□ -1.15
RFC1-216ENST00000514572 SMARCA5O60264 1052 aaPredicted RBP7.89□□□□□ -1.15
RFC1-216ENST00000514572 THBS1P07996 1170 aa7.89□□□□□ -1.15
RFC1-216ENST00000514572 CANXP27824 592 aaKnown RBP7.89□□□□□ -1.15
RFC1-216ENST00000514572 DNAJA1P31689 397 aaKnown RBP7.89□□□□□ -1.15
RFC1-216ENST00000514572 MCF2L2Q86YR7 1114 aa7.89□□□□□ -1.15
RFC1-216ENST00000514572 RASGRP4Q8TDF6 673 aa7.89□□□□□ -1.15
RFC1-216ENST00000514572 PMEPA1Q969W9 287 aa7.89□□□□□ -1.15
RFC1-216ENST00000514572 RUBCNLQ9H714 662 aa7.89□□□□□ -1.15
RFC1-216ENST00000514572 COPRSQ9NQ92 184 aa7.89□□□□□ -1.15
RFC1-216ENST00000514572 AAASQ9NRG9 546 aa7.89□□□□□ -1.15
RFC1-216ENST00000514572 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.89□□□□□ -1.15
RFC1-216ENST00000514572 SENP3-EIF4A1A0A087X0R7 540 aa7.88□□□□□ -1.15
RFC1-216ENST00000514572 A0A1W2PP55 124 aa7.88□□□□□ -1.15
RFC1-216ENST00000514572 FAM157BP0CG42 384 aa7.88□□□□□ -1.15
RFC1-216ENST00000514572 GSTT1P30711 240 aa7.88□□□□□ -1.15
RFC1-216ENST00000514572 GIMAP6Q6P9H5 292 aa7.88□□□□□ -1.15
RFC1-216ENST00000514572 TRIM46Q7Z4K8 759 aa7.88□□□□□ -1.15
RFC1-216ENST00000514572 GADD45BO75293 160 aaPredicted RBP7.87□□□□□ -1.15
RFC1-216ENST00000514572 F11P03951 625 aa7.87□□□□□ -1.15
RFC1-216ENST00000514572 CYP2E1P05181 493 aaPredicted RBP7.87□□□□□ -1.15
RFC1-216ENST00000514572 ATF4P18848 351 aaPredicted RBP7.87□□□□□ -1.15
RFC1-216ENST00000514572 PAK2Q13177 524 aa7.87□□□□□ -1.15
RFC1-216ENST00000514572 UBAP2LQ14157 1087 aaKnown RBP7.87□□□□□ -1.15
RFC1-216ENST00000514572 OR13H1Q8NG92 308 aa7.87□□□□□ -1.15
RFC1-216ENST00000514572 GPAMQ9HCL2 828 aa7.87□□□□□ -1.15
RFC1-216ENST00000514572 LATS2Q9NRM7 1088 aa7.87□□□□□ -1.15
RFC1-216ENST00000514572 HOXD8P13378 290 aaPredicted RBP7.86□□□□□ -1.15
RFC1-216ENST00000514572 BMP1P13497 986 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 CES1P23141 567 aa7.86□□□□□ -1.15
RFC1-216ENST00000514572 GTF2F1P35269 517 aaKnown RBP eCLIP7.86□□□□□ -1.15
RFC1-216ENST00000514572 LBRQ14739 615 aaKnown RBP7.86□□□□□ -1.15
RFC1-216ENST00000514572 CTC1Q2NKJ3 1217 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms