RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 TESK2Q96S53 571 aa11.97□□□□□ -0.49
MATR3-224ENST00000514488 FAM217BQ9NTX9 383 aaPredicted RBP11.97□□□□□ -0.49
MATR3-224ENST00000514488 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
MATR3-224ENST00000514488 KDRP35968 1356 aa11.96□□□□□ -0.49
MATR3-224ENST00000514488 ST20-MTHFSA0A0A6YYL1 179 aa11.96□□□□□ -0.49
MATR3-224ENST00000514488 SLC4A9Q96Q91 983 aa11.96□□□□□ -0.49
MATR3-224ENST00000514488 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
MATR3-224ENST00000514488 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
MATR3-224ENST00000514488 PARP3Q9Y6F1 533 aa11.96□□□□□ -0.49
MATR3-224ENST00000514488 TIAM2Q8IVF5 1701 aa11.95□□□□□ -0.5
MATR3-224ENST00000514488 ANKRD26Q9UPS8 1709 aa11.95□□□□□ -0.5
MATR3-224ENST00000514488 ZNF831Q5JPB2 1677 aa11.95□□□□□ -0.5
MATR3-224ENST00000514488 AMHR2Q16671 573 aa11.95□□□□□ -0.5
MATR3-224ENST00000514488 SMC1BQ8NDV3 1235 aa11.95□□□□□ -0.5
MATR3-224ENST00000514488 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
MATR3-224ENST00000514488 IRX2Q9BZI1 471 aaPredicted RBP11.95□□□□□ -0.5
MATR3-224ENST00000514488 PRKD2Q9BZL6 878 aa11.95□□□□□ -0.5
MATR3-224ENST00000514488 V9GY48 417 aaPredicted RBP11.95□□□□□ -0.5
MATR3-224ENST00000514488 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
MATR3-224ENST00000514488 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
MATR3-224ENST00000514488 PPM1GO15355 546 aaPredicted RBP11.94□□□□□ -0.5
MATR3-224ENST00000514488 S1PR4O95977 384 aa11.94□□□□□ -0.5
MATR3-224ENST00000514488 CHRNA5P30532 468 aa11.94□□□□□ -0.5
MATR3-224ENST00000514488 RASSF7Q02833 373 aa11.94□□□□□ -0.5
MATR3-224ENST00000514488 DALRD3Q5D0E6 543 aaKnown RBP11.94□□□□□ -0.5
MATR3-224ENST00000514488 SPSB2Q99619 263 aa11.94□□□□□ -0.5
MATR3-224ENST00000514488 PIM2Q9P1W9 311 aa11.94□□□□□ -0.5
MATR3-224ENST00000514488 KDM4AO75164 1064 aa11.93□□□□□ -0.5
MATR3-224ENST00000514488 PHKG2P15735 406 aa11.93□□□□□ -0.5
MATR3-224ENST00000514488 RFC4P35249 363 aa11.93□□□□□ -0.5
MATR3-224ENST00000514488 THAP11Q96EK4 314 aa11.93□□□□□ -0.5
MATR3-224ENST00000514488 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
MATR3-224ENST00000514488 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
MATR3-224ENST00000514488 SLC27A5Q9Y2P5 690 aa11.93□□□□□ -0.5
MATR3-224ENST00000514488 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
MATR3-224ENST00000514488 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
MATR3-224ENST00000514488 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
MATR3-224ENST00000514488 USP46P62068 366 aa11.92□□□□□ -0.5
MATR3-224ENST00000514488 DDR1Q08345 913 aa11.92□□□□□ -0.5
MATR3-224ENST00000514488 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
MATR3-224ENST00000514488 RPS6KA4O75676 772 aa11.91□□□□□ -0.5
MATR3-224ENST00000514488 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
MATR3-224ENST00000514488 IFNL2Q8IZJ0 200 aa11.91□□□□□ -0.5
MATR3-224ENST00000514488 ANKLE1Q8NAG6 615 aa11.91□□□□□ -0.5
MATR3-224ENST00000514488 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
MATR3-224ENST00000514488 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.5
MATR3-224ENST00000514488 TJP1Q07157 1748 aa11.9□□□□□ -0.5
MATR3-224ENST00000514488 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
MATR3-224ENST00000514488 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
MATR3-224ENST00000514488 ADAMTS7Q9UKP4 1686 aa11.9□□□□□ -0.5
MATR3-224ENST00000514488 TONSLQ96HA7 1378 aa11.9□□□□□ -0.5
MATR3-224ENST00000514488 KDM6AO15550 1401 aaPredicted RBP11.88□□□□□ -0.51
MATR3-224ENST00000514488 BRICD5Q6PL45 260 aa11.88□□□□□ -0.51
MATR3-224ENST00000514488 CARD14Q9BXL6 1004 aa11.88□□□□□ -0.51
MATR3-224ENST00000514488 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
MATR3-224ENST00000514488 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
MATR3-224ENST00000514488 PTCD1O75127 700 aaKnown RBP11.87□□□□□ -0.51
MATR3-224ENST00000514488 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
MATR3-224ENST00000514488 SSTR3P32745 418 aaPredicted RBP11.87□□□□□ -0.51
MATR3-224ENST00000514488 Q3C1V9 767 aa11.87□□□□□ -0.51
MATR3-224ENST00000514488 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
MATR3-224ENST00000514488 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
MATR3-224ENST00000514488 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
MATR3-224ENST00000514488 POLRMTO00411 1230 aaKnown RBP11.86□□□□□ -0.51
MATR3-224ENST00000514488 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
MATR3-224ENST00000514488 TRIM66O15016 1216 aa11.86□□□□□ -0.51
MATR3-224ENST00000514488 HOXA2O43364 376 aa11.86□□□□□ -0.51
MATR3-224ENST00000514488 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
MATR3-224ENST00000514488 CACNA1SQ13698 1873 aa11.85□□□□□ -0.51
MATR3-224ENST00000514488 ERVV-2B6SEH9 535 aa11.85□□□□□ -0.51
MATR3-224ENST00000514488 LMNB1P20700 586 aa11.85□□□□□ -0.51
MATR3-224ENST00000514488 GIGYF2Q6Y7W6 1299 aaKnown RBP11.85□□□□□ -0.51
MATR3-224ENST00000514488 RNF19BQ6ZMZ0 732 aa11.85□□□□□ -0.51
MATR3-224ENST00000514488 NRXN2Q9P2S2 1712 aa11.85□□□□□ -0.51
MATR3-224ENST00000514488 ZC3H4Q9UPT8 1303 aaKnown RBP11.85□□□□□ -0.51
MATR3-224ENST00000514488 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
MATR3-224ENST00000514488 POTECB2RU33 542 aa11.84□□□□□ -0.51
MATR3-224ENST00000514488 FOXN1O15353 648 aa11.84□□□□□ -0.51
MATR3-224ENST00000514488 CABP4P57796 275 aa11.84□□□□□ -0.51
MATR3-224ENST00000514488 EIF4A2Q14240 407 aaKnown RBP11.84□□□□□ -0.51
MATR3-224ENST00000514488 MSS51Q4VC12 460 aa11.84□□□□□ -0.51
MATR3-224ENST00000514488 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
MATR3-224ENST00000514488 FAM160A2Q8N612 972 aaPredicted RBP11.84□□□□□ -0.51
MATR3-224ENST00000514488 ANKRD31Q8N7Z5 1873 aa11.83□□□□□ -0.52
MATR3-224ENST00000514488 SCN11AQ9UI33 1791 aa11.83□□□□□ -0.52
MATR3-224ENST00000514488 TM4SF1P30408 202 aa11.83□□□□□ -0.52
MATR3-224ENST00000514488 SLC19A1P41440 591 aa11.83□□□□□ -0.52
MATR3-224ENST00000514488 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.52
MATR3-224ENST00000514488 ZNF530Q6P9A1 599 aaPredicted RBP11.83□□□□□ -0.52
MATR3-224ENST00000514488 PARP9Q8IXQ6 854 aa11.83□□□□□ -0.52
MATR3-224ENST00000514488 FER1L6Q2WGJ9 1857 aa11.83□□□□□ -0.52
MATR3-224ENST00000514488 NFKBIEO00221 500 aa11.82□□□□□ -0.52
MATR3-224ENST00000514488 TNNT2P45379 298 aaPredicted RBP11.82□□□□□ -0.52
MATR3-224ENST00000514488 LAPTM4AQ15012 233 aa11.82□□□□□ -0.52
MATR3-224ENST00000514488 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
MATR3-224ENST00000514488 EMID1Q96A84 441 aaPredicted RBP11.82□□□□□ -0.52
MATR3-224ENST00000514488 POLKQ9UBT6 870 aa11.82□□□□□ -0.52
MATR3-224ENST00000514488 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
MATR3-224ENST00000514488 COL11A2P13942 1736 aaPredicted RBP11.81□□□□□ -0.52
MATR3-224ENST00000514488 HSP90AB1P08238 724 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms