RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 DYNC1I1O14576 645 aa15.14■□□□□ 0.01
PRDM16-208ENST00000514189 TFCP2Q12800 502 aa15.14■□□□□ 0.01
PRDM16-208ENST00000514189 BICC1Q9H694 974 aaKnown RBP15.14■□□□□ 0.01
PRDM16-208ENST00000514189 ANAPC15P60006 121 aa15.14■□□□□ 0.01
PRDM16-208ENST00000514189 UBE2Q2Q8WVN8 375 aa15.14■□□□□ 0.01
PRDM16-208ENST00000514189 CCP110O43303 1012 aa15.14■□□□□ 0.01
PRDM16-208ENST00000514189 IGHMBP2P38935 993 aaKnown RBP15.14■□□□□ 0.01
PRDM16-208ENST00000514189 STX1AQ16623 288 aa15.14■□□□□ 0.01
PRDM16-208ENST00000514189 CCDC181Q5TID7 509 aa15.14■□□□□ 0.01
PRDM16-208ENST00000514189 NOL7Q9UMY1 257 aaKnown RBP15.14■□□□□ 0.01
PRDM16-208ENST00000514189 TNRQ92752 1358 aa15.14■□□□□ 0.01
PRDM16-208ENST00000514189 KCNQ3O43525 872 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 SETQ01105 290 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-208ENST00000514189 KIAA1328Q86T90 577 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 AKAP2Q9Y2D5 859 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 CTDP1Q9Y5B0 961 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-208ENST00000514189 PREX2Q70Z35 1606 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 UHRF1BP1Q6BDS2 1440 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 LIG1P18858 919 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 CHL1O00533 1208 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 METAP2P50579 478 aaKnown RBP eCLIP15.13■□□□□ 0.01
PRDM16-208ENST00000514189 STX17P56962 302 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
PRDM16-208ENST00000514189 CWC25Q9NXE8 425 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-208ENST00000514189 ZSCAN29Q8IWY8 852 aaPredicted RBP15.12■□□□□ 0.01
PRDM16-208ENST00000514189 DACH1Q9UI36 760 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 ATP10AO60312 1499 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 USP19O94966 1318 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
PRDM16-208ENST00000514189 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.012e-9■■■■■ 33.8
PRDM16-208ENST00000514189 SYKP43405 635 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 LINS1Q8NG48 757 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 JAG2Q9Y219 1238 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 HMGB1P09429 215 aaKnown RBP15.12■□□□□ 0.01
PRDM16-208ENST00000514189 MCM5P33992 734 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 UBASH3AP57075 661 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 MAP3K12Q12852 859 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 SOGA3Q5TF21 947 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 UNC5CLQ8IV45 518 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 ABCC1P33527 1531 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
PRDM16-208ENST00000514189 STIM1Q13586 685 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 MCMDC2Q4G0Z9 681 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 DBNDD2Q9BQY9 259 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 JAK2O60674 1132 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 KCNA6P17658 529 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 RBM5P52756 815 aaKnown RBP eCLIP15.11■□□□□ 0.01
PRDM16-208ENST00000514189 PIP4K2BP78356 416 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 ZNF594Q96JF6 807 aaPredicted RBP15.11■□□□□ 0.01
PRDM16-208ENST00000514189 NUP88Q99567 741 aaPredicted RBP15.11■□□□□ 0.01
PRDM16-208ENST00000514189 ZKSCAN3Q9BRR0 538 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 ALG1Q9BT22 464 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 MKNK2Q9HBH9 465 aa15.11■□□□□ 0.01
PRDM16-208ENST00000514189 SEPT11Q9NVA2 429 aaKnown RBP15.11■□□□□ 0.01
PRDM16-208ENST00000514189 IDEP14735 1019 aa15.1■□□□□ 0.01
PRDM16-208ENST00000514189 UVSSAQ2YD98 709 aa15.1■□□□□ 0.01
PRDM16-208ENST00000514189 SHROOM2Q13796 1616 aa15.1■□□□□ 0.01
PRDM16-208ENST00000514189 PTPRTO14522 1441 aa15.1■□□□□ 0.01
PRDM16-208ENST00000514189 CCDC102BQ68D86 513 aa15.1■□□□□ 0.01
PRDM16-208ENST00000514189 CDC42BPAQ5VT25 1732 aa15.1■□□□□ 0.01
PRDM16-208ENST00000514189 PTPDC1A2A3K4 754 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 SSRP1Q08945 709 aaKnown RBP15.09■□□□□ 0.01
PRDM16-208ENST00000514189 PRM3Q9NNZ6 103 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 GCC2Q8IWJ2 1684 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 ANKRD18BA2A2Z9 1011 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 MCM6Q14566 821 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 NCOA7Q8NI08 942 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 CCDC12Q8WUD4 166 aaPredicted RBP15.09■□□□□ 0.01
PRDM16-208ENST00000514189 IFNKQ9P0W0 207 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 A0A087WWV3 80 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 CTAGE5O15320 804 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 NLRP5P59047 1200 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 SPECC1Q5M775 1068 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 RUFY3Q7L099 469 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 TRMT2AQ8IZ69 625 aaKnown RBP15.09■□□□□ 0.01
PRDM16-208ENST00000514189 ZNF521Q96K83 1311 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 ZMYM3Q14202 1370 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
PRDM16-208ENST00000514189 ADCY10Q96PN6 1610 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 CASQ1P31415 396 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 CTCFLQ8NI51 663 aaPredicted RBP15.09■□□□□ 0.01
PRDM16-208ENST00000514189 CWC15Q9P013 229 aaKnown RBP15.09■□□□□ 0.01
PRDM16-208ENST00000514189 CCDC171Q6TFL3 1326 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 NPHP3Q7Z494 1330 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 NPATQ14207 1427 aa15.09■□□□□ 0.01
PRDM16-208ENST00000514189 GPIHBP1Q8IV16 184 aa15.08■□□□□ 0.01
PRDM16-208ENST00000514189 MIGA1Q8NAN2 632 aa15.08■□□□□ 0.01
PRDM16-208ENST00000514189 MRPS27Q92552 414 aaKnown RBP15.08■□□□□ 0.01
PRDM16-208ENST00000514189 SGSM2O43147 1006 aa15.08■□□□□ 0
PRDM16-208ENST00000514189 PRC1O43663 620 aa15.08■□□□□ 0
PRDM16-208ENST00000514189 ERLIN1O75477 346 aa15.08■□□□□ 0
PRDM16-208ENST00000514189 MEX3CQ5U5Q3 659 aaKnown RBP15.08■□□□□ 0
PRDM16-208ENST00000514189 FAM89AQ96GI7 184 aa15.08■□□□□ 0
PRDM16-208ENST00000514189 PRIMPOLQ96LW4 560 aa15.08■□□□□ 0
PRDM16-208ENST00000514189 USP44Q9H0E7 712 aa15.08■□□□□ 0
PRDM16-208ENST00000514189 ADGBQ8N7X0 1667 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms