RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 EML1O00423 815 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 PDGFAP04085 211 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 BCRP11274 1271 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 TEAD4Q15561 434 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 C8orf34Q49A92 452 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 GJD3Q8N144 294 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 TTC16Q8NEE8 873 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 L3MBTL2Q969R5 705 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 IFT43Q96FT9 208 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 CCSER2Q9H7U1 834 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 CAPN10Q9HC96 672 aa5.89□□□□□ -1.47
SGCB-203ENST00000514133 METTL5Q9NRN9 209 aaKnown RBP5.89□□□□□ -1.47
SGCB-203ENST00000514133 PIK3R2O00459 728 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 CELA2BP08218 269 aaPredicted RBP5.88□□□□□ -1.47
SGCB-203ENST00000514133 PCSK2P16519 638 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 GNA15P30679 374 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 RTN1Q16799 776 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 FAM182BQ5T319 152 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 ALYREFQ86V81 257 aaKnown RBP5.88□□□□□ -1.47
SGCB-203ENST00000514133 ZDHHC1Q8WTX9 485 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 CSRNP1Q96S65 589 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 TGIF2Q9GZN2 237 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 AVENQ9NQS1 362 aaPredicted RBP5.88□□□□□ -1.47
SGCB-203ENST00000514133 PCDHGC4Q9Y5F7 938 aa5.88□□□□□ -1.47
SGCB-203ENST00000514133 PHF20L1A8MW92 1017 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 CDK11BP21127 795 aaKnown RBP5.87□□□□□ -1.47
SGCB-203ENST00000514133 PHKA2P46019 1235 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 HIRAP54198 1017 aaPredicted RBP5.87□□□□□ -1.47
SGCB-203ENST00000514133 ORC1Q13415 861 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 LAMC2Q13753 1193 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 SAMD5Q5TGI4 173 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 POTEAQ6S8J7 498 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 TREML1Q86YW5 311 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 ZNF295-AS1Q8N0V1 137 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 BEND7Q8N7W2 519 aaPredicted RBP5.87□□□□□ -1.47
SGCB-203ENST00000514133 GOLGA6L1Q8N7Z2 621 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 GPR152Q8TDT2 470 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 PHACTR1Q9C0D0 580 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 ACBD3Q9H3P7 528 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 PRKAG2Q9UGJ0 569 aa5.87□□□□□ -1.47
SGCB-203ENST00000514133 CDK11AQ9UQ88 783 aaPredicted RBP5.87□□□□□ -1.47
SGCB-203ENST00000514133 OIP5O43482 229 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 PLA2G4AP47712 749 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 GNL2Q13823 731 aaKnown RBP5.86□□□□□ -1.47
SGCB-203ENST00000514133 UBAP2LQ14157 1087 aaKnown RBP5.86□□□□□ -1.47
SGCB-203ENST00000514133 LYPD4Q6UWN0 246 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 DPH6Q7L8W6 267 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 PODNQ7Z5L7 613 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 NUDT16Q96DE0 195 aaKnown RBP5.86□□□□□ -1.47
SGCB-203ENST00000514133 SPATA32Q96LK8 384 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 DNAJC2Q99543 621 aaKnown RBP5.86□□□□□ -1.47
SGCB-203ENST00000514133 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 OXCT2Q9BYC2 517 aaPredicted RBP5.86□□□□□ -1.47
SGCB-203ENST00000514133 GPAMQ9HCL2 828 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 NDFIP2Q9NV92 336 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.86□□□□□ -1.47
SGCB-203ENST00000514133 AK5Q9Y6K8 562 aa5.86□□□□□ -1.47
SGCB-203ENST00000514133 A6NHS1 94 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 EIF1AYO14602 144 aaKnown RBP5.85□□□□□ -1.47
SGCB-203ENST00000514133 NEFLP07196 543 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 ATP2B1P20020 1258 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 GTF2F1P35269 517 aaKnown RBP eCLIP5.85□□□□□ -1.47
SGCB-203ENST00000514133 TNNI2P48788 182 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 HIF1AQ16665 826 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 C1orf53Q5VUE5 145 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 TMEM151AQ8N4L1 468 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 FBF1Q8TES7 1133 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 GGNBP2Q9H3C7 697 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 SPG7Q9UQ90 795 aa5.85□□□□□ -1.47
SGCB-203ENST00000514133 GPR25O00155 361 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 IGHA1P01876 353 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 FAM157BP0CG42 384 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 ARAFP10398 606 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 ATP4AP20648 1035 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 FGFR3P22607 806 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 CANXP27824 592 aaKnown RBP5.84□□□□□ -1.47
SGCB-203ENST00000514133 DNAJA1P31689 397 aaKnown RBP5.84□□□□□ -1.47
SGCB-203ENST00000514133 RASSF7Q02833 373 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 SLC43A3Q8NBI5 491 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 DHX38Q92620 1227 aaKnown RBP5.84□□□□□ -1.47
SGCB-203ENST00000514133 ACDQ96AP0 544 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 AIDAQ96BJ3 306 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 FRMD6Q96NE9 622 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 ZCCHC2Q9C0B9 1178 aaKnown RBP5.84□□□□□ -1.47
SGCB-203ENST00000514133 RUBCNLQ9H714 662 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 FAM13BQ9NYF5 915 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 ANKIB1Q9P2G1 1089 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 GJA3Q9Y6H8 435 aa5.84□□□□□ -1.47
SGCB-203ENST00000514133 A0A1W2PNR3 127 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 ATXN7O15265 892 aaPredicted RBP5.83□□□□□ -1.48
SGCB-203ENST00000514133 CPNE3O75131 537 aaKnown RBP5.83□□□□□ -1.48
SGCB-203ENST00000514133 GDF11O95390 407 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 THBS1P07996 1170 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 CTSHP09668 335 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 BMP4P12644 408 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 EIF4BP23588 611 aaKnown RBP5.83□□□□□ -1.48
SGCB-203ENST00000514133 TXLNAP40222 546 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 ZNF394Q53GI3 561 aa5.83□□□□□ -1.48
SGCB-203ENST00000514133 ARSJQ5FYB0 599 aaPredicted RBP5.83□□□□□ -1.48
SGCB-203ENST00000514133 SLCO4C1Q6ZQN7 724 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms