RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, human

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFC-208	ENST00000512711	SCNN1A	P37088	669 aa		4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	AFF1	P51825	1210 aa	Known RBP	4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	MLLT1	Q03111	559 aa	Predicted RBP	4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	HIF1A	Q16665	826 aa		4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	ILDR2	Q71H61	639 aa		4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	TREML1	Q86YW5	311 aa		4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	ETFBKMT	Q8IXQ9	262 aa		4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	RGL4	Q8IZJ4	473 aa		4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	VTI1A	Q96AJ9	217 aa		4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	RTCB	Q9Y3I0	505 aa	Known RBP	4.97	□□□□□ -1.61
PDGFC-208	ENST00000512711	ZBTB39	O15060	712 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	LILRB5	O75023	590 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	SWI5	Q1ZZU3	235 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	ZMYM1	Q5SVZ6	1142 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	TRAPPC3L	Q5T215	181 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	PSAPL1	Q6NUJ1	521 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	HFE2	Q6ZVN8	426 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	KRTAP1-3	Q8IUG1	177 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	CMTR1	Q8N1G2	835 aa	Known RBP	4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	PNMA5	Q96PV4	448 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	MKNK1	Q9BUB5	465 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	JPH1	Q9HDC5	661 aa	Predicted RBP	4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	KCNMB2	Q9Y691	235 aa		4.96	□□□□□ -1.62
PDGFC-208	ENST00000512711	MAP3K6	O95382	1288 aa		4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	SPATA31C1	P0DKV0	1188 aa		4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	CPB1	P15086	417 aa		4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	ARSD	P51689	593 aa		4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	TRIM28	Q13263	835 aa	Known RBP	4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	PERM1	Q5SV97	790 aa		4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	FAM35A	Q86V20	835 aa		4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	C1orf115	Q9H7X2	142 aa		4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.95	□□□□□ -1.62
PDGFC-208	ENST00000512711		J3QW42	95 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	TNFRSF10B	O14763	440 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	XYLB	O75191	536 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	SELP	P16109	830 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	GATA4	P43694	442 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	GRIK5	Q16478	980 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	SHISA2	Q6UWI4	295 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	DHX32	Q7L7V1	743 aa	Known RBP	4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	TRPM4	Q8TD43	1214 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	LPIN3	Q9BQK8	851 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711	SEPT3	Q9UH03	358 aa		4.94	□□□□□ -1.62
PDGFC-208	ENST00000512711		A0A0A0MRY4	1105 aa		4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	MMP20	O60882	483 aa		4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	RGS9	O75916	674 aa	Predicted RBP	4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	RARA	P10276	462 aa		4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	TRIP4	Q15650	581 aa	Predicted RBP	4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	PRRT3	Q5FWE3	981 aa		4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	C16orf46	Q6P387	395 aa		4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	FOXD4L3	Q6VB84	417 aa	Predicted RBP	4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	PBXIP1	Q96AQ6	731 aa		4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	EFCC1	Q9HA90	598 aa		4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PDGFC-208	ENST00000512711	CARNS1	A5YM72	827 aa		4.92	□□□□□ -1.62
PDGFC-208	ENST00000512711	EGFR	P00533	1210 aa		4.92	□□□□□ -1.62
PDGFC-208	ENST00000512711	EPB42	P16452	691 aa		4.92	□□□□□ -1.62
PDGFC-208	ENST00000512711	BRD2	P25440	801 aa	Known RBP	4.92	□□□□□ -1.62
PDGFC-208	ENST00000512711	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.92	□□□□□ -1.62
PDGFC-208	ENST00000512711	TPSG1	Q9NRR2	321 aa		4.92	□□□□□ -1.62
PDGFC-208	ENST00000512711	TLR7	Q9NYK1	1049 aa	Known RBP	4.92	□□□□□ -1.62
PDGFC-208	ENST00000512711	SERPINA10	Q9UK55	444 aa		4.92	□□□□□ -1.62
PDGFC-208	ENST00000512711	SPDYE3	A6NKU9	549 aa		4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	NKAPL	Q5M9Q1	402 aa		4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	COL13A1	Q5TAT6	717 aa	Predicted RBP	4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	CCDC82	Q8N4S0	544 aa		4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	CLP1	Q92989	425 aa	Known RBP	4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	CCDC97	Q96F63	343 aa	Predicted RBP	4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	SMG9	Q9H0W8	520 aa	Known RBP	4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	C11orf16	Q9NQ32	467 aa		4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.91	□□□□□ -1.62
PDGFC-208	ENST00000512711	LOC102724428	A0A0B4J2F2	783 aa		4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	APBA3	O96018	575 aa		4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	SIK1	P57059	783 aa		4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	GPLD1	P80108	840 aa		4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	MSL1	Q68DK7	614 aa		4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	ELMSAN1	Q6PJG2	1045 aa		4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	ATCAY	Q86WG3	371 aa		4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	COL26A1	Q96A83	441 aa		4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	NSUN5	Q96P11	429 aa	Known RBP	4.9	□□□□□ -1.63
PDGFC-208	ENST00000512711	SCO2	A0A1W2PP80	73 aa		4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	DEAF1	O75398	565 aa	Predicted RBP	4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	ATP2B4	P23634	1241 aa		4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	ZAP70	P43403	619 aa		4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	NRL	P54845	237 aa		4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	ADAMTSL4	Q6UY14	1074 aa		4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	FMR1NB	Q8N0W7	255 aa	Predicted RBP	4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	GPR152	Q8TDT2	470 aa		4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	KRTAP4-12	Q9BQ66	201 aa		4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	STIM2	Q9P246	746 aa		4.89	□□□□□ -1.63
PDGFC-208	ENST00000512711	UBAP1L	F5GYI3	381 aa		4.88	□□□□□ -1.63
PDGFC-208	ENST00000512711	CYP2E1	P05181	493 aa	Predicted RBP	4.88	□□□□□ -1.63
PDGFC-208	ENST00000512711	ELN	P15502	786 aa		4.88	□□□□□ -1.63
PDGFC-208	ENST00000512711	EIF2AK2	P19525	551 aa	Known RBP	4.88	□□□□□ -1.63
PDGFC-208	ENST00000512711	ADGRE1	Q14246	886 aa		4.88	□□□□□ -1.63
PDGFC-208	ENST00000512711	MBTPS1	Q14703	1052 aa		4.88	□□□□□ -1.63
PDGFC-208	ENST00000512711	PCSK7	Q16549	785 aa		4.88	□□□□□ -1.63
PDGFC-208	ENST00000512711	ARTN	Q5T4W7	220 aa		4.88	□□□□□ -1.63

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