RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
SNF8-211ENST00000512243 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
SNF8-211ENST00000512243 THSD7AQ9UPZ6 1657 aa12.55□□□□□ -0.4
SNF8-211ENST00000512243 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
SNF8-211ENST00000512243 SH3D19Q5HYK7 790 aa12.55□□□□□ -0.4
SNF8-211ENST00000512243 TCP11L2Q8N4U5 519 aa12.55□□□□□ -0.4
SNF8-211ENST00000512243 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
SNF8-211ENST00000512243 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
SNF8-211ENST00000512243 MRS2Q9HD23 443 aa12.55□□□□□ -0.4
SNF8-211ENST00000512243 USP35Q9P2H5 1018 aa12.55□□□□□ -0.4
SNF8-211ENST00000512243 IGSF1Q8N6C5 1336 aa12.55□□□□□ -0.4
SNF8-211ENST00000512243 LRRC37A3O60309 1634 aa12.55□□□□□ -0.4
SNF8-211ENST00000512243 SIAH2O43255 324 aa12.54□□□□□ -0.4
SNF8-211ENST00000512243 SKIV2LQ15477 1246 aaKnown RBP12.54□□□□□ -0.4
SNF8-211ENST00000512243 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
SNF8-211ENST00000512243 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
SNF8-211ENST00000512243 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
SNF8-211ENST00000512243 HPS1Q92902 700 aa12.54□□□□□ -0.4
SNF8-211ENST00000512243 GJD4Q96KN9 370 aaPredicted RBP12.54□□□□□ -0.4
SNF8-211ENST00000512243 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
SNF8-211ENST00000512243 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
SNF8-211ENST00000512243 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
SNF8-211ENST00000512243 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNF8-211ENST00000512243 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
SNF8-211ENST00000512243 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
SNF8-211ENST00000512243 TLL2Q9Y6L7 1015 aa12.53□□□□□ -0.4
SNF8-211ENST00000512243 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
SNF8-211ENST00000512243 DISP2A7MBM2 1401 aa12.53□□□□□ -0.4
SNF8-211ENST00000512243 MEGF6O75095 1541 aa12.52□□□□□ -0.4
SNF8-211ENST00000512243 SHANK3Q9BYB0 1731 aa12.52□□□□□ -0.41
SNF8-211ENST00000512243 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
SNF8-211ENST00000512243 U2AF1L5P0DN76 240 aaPredicted RBP12.52□□□□□ -0.41
SNF8-211ENST00000512243 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
SNF8-211ENST00000512243 U2AF1Q01081 240 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNF8-211ENST00000512243 CTC1Q2NKJ3 1217 aa12.52□□□□□ -0.41
SNF8-211ENST00000512243 KDRP35968 1356 aa12.52□□□□□ -0.41
SNF8-211ENST00000512243 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
SNF8-211ENST00000512243 CCDC184Q52MB2 194 aa12.51□□□□□ -0.41
SNF8-211ENST00000512243 SULT6B1Q6IMI4 303 aa12.51□□□□□ -0.41
SNF8-211ENST00000512243 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
SNF8-211ENST00000512243 HMOX1P09601 288 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 IL2RBP14784 551 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
SNF8-211ENST00000512243 RXRBP28702 533 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 AEBP1Q8IUX7 1158 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 FOXJ1Q92949 421 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
SNF8-211ENST00000512243 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 KAT6BQ8WYB5 2073 aa12.5□□□□□ -0.41
SNF8-211ENST00000512243 SMCPP49901 116 aaPredicted RBP12.49□□□□□ -0.41
SNF8-211ENST00000512243 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
SNF8-211ENST00000512243 TPRNQ4KMQ1 711 aa12.49□□□□□ -0.41
SNF8-211ENST00000512243 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
SNF8-211ENST00000512243 RGS12O14924 1447 aa12.48□□□□□ -0.41
SNF8-211ENST00000512243 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
SNF8-211ENST00000512243 WASF2Q9Y6W5 498 aa12.48□□□□□ -0.41
SNF8-211ENST00000512243 NEFMP07197 916 aa12.47□□□□□ -0.41
SNF8-211ENST00000512243 VARSP26640 1264 aaKnown RBP12.47□□□□□ -0.41
SNF8-211ENST00000512243 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
SNF8-211ENST00000512243 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
SNF8-211ENST00000512243 AGERQ15109 404 aa12.46□□□□□ -0.41
SNF8-211ENST00000512243 SEPT12Q8IYM1 358 aa12.46□□□□□ -0.41
SNF8-211ENST00000512243 GMPR2Q9P2T1 348 aaKnown RBP12.46□□□□□ -0.41
SNF8-211ENST00000512243 MAPK8IP3Q9UPT6 1336 aa12.45□□□□□ -0.42
SNF8-211ENST00000512243 DDB1Q16531 1140 aa12.45□□□□□ -0.42
SNF8-211ENST00000512243 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
SNF8-211ENST00000512243 LRRN4Q8WUT4 740 aa12.45□□□□□ -0.42
SNF8-211ENST00000512243 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
SNF8-211ENST00000512243 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
SNF8-211ENST00000512243 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
SNF8-211ENST00000512243 EXOC5O00471 708 aa12.44□□□□□ -0.42
SNF8-211ENST00000512243 AMOTQ4VCS5 1084 aa12.44□□□□□ -0.42
SNF8-211ENST00000512243 PLEKHO1Q53GL0 409 aaPredicted RBP12.44□□□□□ -0.42
SNF8-211ENST00000512243 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
SNF8-211ENST00000512243 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
SNF8-211ENST00000512243 ZCRB1Q8TBF4 217 aaKnown RBP12.44□□□□□ -0.42
SNF8-211ENST00000512243 ADAMTS8Q9UP79 889 aa12.44□□□□□ -0.42
SNF8-211ENST00000512243 SCN11AQ9UI33 1791 aa12.43□□□□□ -0.42
SNF8-211ENST00000512243 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
SNF8-211ENST00000512243 ZNF530Q6P9A1 599 aaPredicted RBP12.43□□□□□ -0.42
SNF8-211ENST00000512243 CCDC146Q8IYE0 955 aa12.43□□□□□ -0.42
SNF8-211ENST00000512243 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
SNF8-211ENST00000512243 SBF2Q86WG5 1849 aa12.43□□□□□ -0.42
SNF8-211ENST00000512243 BRPF1P55201 1214 aaPredicted RBP12.42□□□□□ -0.42
SNF8-211ENST00000512243 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
SNF8-211ENST00000512243 PPP2R2DQ66LE6 453 aa12.42□□□□□ -0.42
SNF8-211ENST00000512243 GAS2L2Q8NHY3 880 aa12.42□□□□□ -0.42
SNF8-211ENST00000512243 FAM174AQ8TBP5 190 aa12.42□□□□□ -0.42
SNF8-211ENST00000512243 RUNDC1Q96C34 613 aa12.42□□□□□ -0.42
SNF8-211ENST00000512243 ATP13A2Q9NQ11 1180 aa12.42□□□□□ -0.42
SNF8-211ENST00000512243 AP1G2O75843 785 aa12.41□□□□□ -0.42
SNF8-211ENST00000512243 ARID5BQ14865 1188 aa12.41□□□□□ -0.42
SNF8-211ENST00000512243 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
SNF8-211ENST00000512243 ZNF775Q96BV0 537 aaPredicted RBP12.41□□□□□ -0.42
SNF8-211ENST00000512243 PLEKHF1Q96S99 279 aa12.41□□□□□ -0.42
SNF8-211ENST00000512243 TOGARAM1Q9Y4F4 1720 aa12.41□□□□□ -0.42
SNF8-211ENST00000512243 ITGB4P16144 1822 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms