RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 CCDC102AQ96A19 550 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 ABCC2Q92887 1545 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 USP19O94966 1318 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 SGSM2O43147 1006 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 GADD45BO75293 160 aaPredicted RBP9.33□□□□□ -0.92
NEK1-208ENST00000512193 GCP02774 474 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 SLC5A1P13866 664 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 PTGS1P23219 599 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 SNW1Q13573 536 aaKnown RBP9.33□□□□□ -0.92
NEK1-208ENST00000512193 HS1BP3Q53T59 392 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 HSP90AB3PQ58FF7 597 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 CCDC181Q5TID7 509 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 CEP135Q66GS9 1140 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 CCDC102BQ68D86 513 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 RUFY3Q7L099 469 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 SNX14Q9Y5W7 946 aa9.33□□□□□ -0.92
NEK1-208ENST00000512193 H0YHG0 523 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 SYKP43405 635 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 TFCP2Q12800 502 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 KIAA1328Q86T90 577 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 AOPEPQ8N6M6 819 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 ZHX1Q9UKY1 873 aaPredicted RBP9.32□□□□□ -0.92
NEK1-208ENST00000512193 POLR3GO15318 223 aaPredicted RBP9.32□□□□□ -0.92
NEK1-208ENST00000512193 USP5P45974 858 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 MRPS27Q92552 414 aaKnown RBP9.32□□□□□ -0.92
NEK1-208ENST00000512193 FAM227BQ96M60 508 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 TMEM63CQ9P1W3 806 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.32□□□□□ -0.92
NEK1-208ENST00000512193 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
NEK1-208ENST00000512193 V9GYY5 206 aaPredicted RBP9.32□□□□□ -0.92
NEK1-208ENST00000512193 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
NEK1-208ENST00000512193 CAVIN4Q5BKX8 364 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 GAS2L3Q86XJ1 694 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 ALG1Q9BT22 464 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 ZSWIM4Q9H7M6 989 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 MKNK2Q9HBH9 465 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 PAG1Q9NWQ8 432 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 ABCC4O15439 1325 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 IL15P40933 162 aaPredicted RBP9.32□□□□□ -0.92
NEK1-208ENST00000512193 TIMM10P62072 90 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 ATP2B3Q16720 1220 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 ZFYVE27Q5T4F4 411 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
NEK1-208ENST00000512193 EIF3JO75822 258 aaKnown RBP9.31□□□□□ -0.92
NEK1-208ENST00000512193 ZNF445P59923 1031 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 DDX21Q9NR30 783 aaKnown RBP eCLIP9.31□□□□□ -0.92
NEK1-208ENST00000512193 EDC4Q6P2E9 1401 aaKnown RBP9.31□□□□□ -0.92
NEK1-208ENST00000512193 KIF5CO60282 957 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 CDR1P51861 262 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 SLC9C2Q5TAH2 1124 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 MFSD6Q6ZSS7 791 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 RNF41Q9H4P4 317 aaPredicted RBP9.31□□□□□ -0.92
NEK1-208ENST00000512193 CGNQ9P2M7 1197 aaKnown RBP9.31□□□□□ -0.92
NEK1-208ENST00000512193 ATP7AQ04656 1500 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 RNMTO43148 476 aaKnown RBP9.31□□□□□ -0.92
NEK1-208ENST00000512193 ZBTB43O43298 467 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 CD2BP2O95400 341 aaKnown RBP9.31□□□□□ -0.92
NEK1-208ENST00000512193 C17orf53Q8N3J3 647 aaPredicted RBP9.31□□□□□ -0.92
NEK1-208ENST00000512193 PALD1Q9ULE6 856 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 NDUFB9Q9Y6M9 179 aa9.31□□□□□ -0.92
NEK1-208ENST00000512193 PTPDC1A2A3K4 754 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 PRC1O43663 620 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 CASQ1P31415 396 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 UBASH3AP57075 661 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 NLRP5P59047 1200 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 GNG11P61952 73 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 SLC4A8Q2Y0W8 1093 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 IP6K1Q92551 441 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 DHX32Q7L7V1 743 aaKnown RBP9.3□□□□□ -0.92
NEK1-208ENST00000512193 KCNG4Q8TDN1 519 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 USP44Q9H0E7 712 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 TSPYL1Q9H0U9 437 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 CENPHQ9H3R5 247 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 BMP2KQ9NSY1 1161 aaPredicted RBP9.3□□□□□ -0.92
NEK1-208ENST00000512193 ADAMTS2O95450 1211 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 TTF1Q15361 905 aaPredicted RBP9.3□□□□□ -0.92
NEK1-208ENST00000512193 DBNDD2Q9BQY9 259 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 ZMYM3Q14202 1370 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 SBNO2Q9Y2G9 1366 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 ERVK-7P63135 1459 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 SPTLC2O15270 562 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 ZFYP08048 801 aaPredicted RBP9.3□□□□□ -0.92
NEK1-208ENST00000512193 RXRAP19793 462 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 CATIPQ7Z7H3 387 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
NEK1-208ENST00000512193 ZCRB1Q8TBF4 217 aaKnown RBP9.3□□□□□ -0.92
NEK1-208ENST00000512193 TRERF1Q96PN7 1200 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 LUC7LQ9NQ29 371 aaKnown RBP9.3□□□□□ -0.92
NEK1-208ENST00000512193 ATP10AO60312 1499 aa9.3□□□□□ -0.92
NEK1-208ENST00000512193 RAD50Q92878 1312 aa9.29□□□□□ -0.92
NEK1-208ENST00000512193 RTL1A6NKG5 1358 aa9.29□□□□□ -0.92
NEK1-208ENST00000512193 NUP88Q99567 741 aaPredicted RBP9.29□□□□□ -0.92
NEK1-208ENST00000512193 DNAI1Q9UI46 699 aa9.29□□□□□ -0.92
NEK1-208ENST00000512193 PAXBP1Q9Y5B6 917 aa9.29□□□□□ -0.92
NEK1-208ENST00000512193 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
NEK1-208ENST00000512193 CCDC194A0A1B0GVG4 234 aa9.29□□□□□ -0.92
NEK1-208ENST00000512193 DZIP1Q86YF9 867 aaKnown RBP9.29□□□□□ -0.92
NEK1-208ENST00000512193 ZSCAN29Q8IWY8 852 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms