RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 UBAP2LQ14157 1087 aaKnown RBP7.1□□□□□ -1.27
PTPN13-208ENST00000511105 WDR44Q5JSH3 913 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 C1orf229Q6ZS94 237 aaPredicted RBP7.1□□□□□ -1.27
PTPN13-208ENST00000511105 RHBDD1Q8TEB9 315 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 ABHD17AQ96GS6 310 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 NCOA2Q15596 1464 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 BCORL1Q5H9F3 1711 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 CDC42BPAQ5VT25 1732 aa7.1□□□□□ -1.27
PTPN13-208ENST00000511105 ADAMTSL3P82987 1691 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 SAMD9LQ8IVG5 1584 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 TSPY4P0CV99 314 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 TSPY10P0CW01 314 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 CTBSQ01459 385 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 PSME1Q06323 249 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 FAM50AQ14320 339 aaKnown RBP7.09□□□□□ -1.27
PTPN13-208ENST00000511105 PGBD3Q8N328 593 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 TMEM151AQ8N4L1 468 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 NEDD1Q8NHV4 660 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 GIPC2Q8TF65 315 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 GMCL1Q96IK5 515 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 RRP7BPQ9NSQ0 103 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 SYCP2Q9BX26 1530 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 ZNF518AQ6AHZ1 1483 aa7.09□□□□□ -1.27
PTPN13-208ENST00000511105 C9orf84Q5VXU9 1444 aa7.09□□□□□ -1.28
PTPN13-208ENST00000511105 VPS8Q8N3P4 1428 aa7.09□□□□□ -1.28
PTPN13-208ENST00000511105 CFAP74Q9C0B2 1584 aa7.08□□□□□ -1.28
PTPN13-208ENST00000511105 ANKRD33BA6NCL7 494 aa7.08□□□□□ -1.28
PTPN13-208ENST00000511105 C2CD2LO14523 706 aa7.08□□□□□ -1.28
PTPN13-208ENST00000511105 BNIP3LO60238 219 aa7.08□□□□□ -1.28
PTPN13-208ENST00000511105 CABP1Q9NZU7 370 aa7.08□□□□□ -1.28
PTPN13-208ENST00000511105 ARHGEF40Q8TER5 1519 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 MAGI2Q86UL8 1455 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 BCRP11274 1271 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 TCF3P15923 654 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 SEC13P55735 322 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 GTF2IP78347 998 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 FBXO33Q7Z6M2 555 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 TNS4Q8IZW8 715 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 KLRG1Q96E93 195 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 BIN2Q9UBW5 565 aaPredicted RBP7.07□□□□□ -1.28
PTPN13-208ENST00000511105 HCN2Q9UL51 889 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 PREX2Q70Z35 1606 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 TIAM1Q13009 1591 aa7.07□□□□□ -1.28
PTPN13-208ENST00000511105 SUPT6HQ7KZ85 1726 aaKnown RBP7.07□□□□□ -1.28
PTPN13-208ENST00000511105 ABCC1P33527 1531 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 LRRC9Q6ZRR7 1453 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 ABCA6Q8N139 1617 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 A6NJY4 79 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 H3BRB1 525 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 ZBTB7BO15156 539 aaPredicted RBP7.06□□□□□ -1.28
PTPN13-208ENST00000511105 ICMTO60725 284 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 LGR5O75473 907 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 SCNN1AP37088 669 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 ARSJQ5FYB0 599 aaPredicted RBP7.06□□□□□ -1.28
PTPN13-208ENST00000511105 NIFKQ9BYG3 293 aaKnown RBP7.06□□□□□ -1.28
PTPN13-208ENST00000511105 ZCCHC2Q9C0B9 1178 aaKnown RBP7.06□□□□□ -1.28
PTPN13-208ENST00000511105 TUT1Q9H6E5 874 aaKnown RBP7.06□□□□□ -1.28
PTPN13-208ENST00000511105 DIP2CQ9Y2E4 1556 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 ZMYM3Q14202 1370 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 ZMYM4Q5VZL5 1548 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 ITSN2Q9NZM3 1697 aa7.06□□□□□ -1.28
PTPN13-208ENST00000511105 KIDINS220Q9ULH0 1771 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 MLH3Q9UHC1 1453 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 SHISA8B8ZZ34 492 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 C21orf2O43822 256 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 PRMT3O60678 531 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 ATP4AP20648 1035 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 TXLNAP40222 546 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 SNRPNP63162 240 aaKnown RBP7.05□□□□□ -1.28
PTPN13-208ENST00000511105 COL19A1Q14993 1142 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 EFHC2Q5JST6 749 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 GALNT6Q8NCL4 622 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 GAS2L2Q8NHY3 880 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 C8orf37Q96NL8 207 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 ASB16Q96NS5 453 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 CFHR5Q9BXR6 569 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 ZNF358Q9NW07 568 aa7.05□□□□□ -1.28
PTPN13-208ENST00000511105 IQSEC3Q9UPP2 1182 aaPredicted RBP7.05□□□□□ -1.28
PTPN13-208ENST00000511105 MBD5Q9P267 1494 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 WASHC2CQ9Y4E1 1318 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 A0A1W2PNR3 127 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 DCDC2BA2VCK2 349 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 M0R2N6 131 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 ZNF211Q13398 564 aaPredicted RBP7.04□□□□□ -1.28
PTPN13-208ENST00000511105 XP32Q5T750 250 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 SH3PXD2AQ5TCZ1 1133 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 CCDC102BQ68D86 513 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 TPCN2Q8NHX9 752 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 SLC4A9Q96Q91 983 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 OXCT2Q9BYC2 517 aaPredicted RBP7.04□□□□□ -1.28
PTPN13-208ENST00000511105 USP35Q9P2H5 1018 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 DNMT3AQ9Y6K1 912 aaPredicted RBP7.04□□□□□ -1.28
PTPN13-208ENST00000511105 EHBP1L1Q8N3D4 1523 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 A2MP01023 1474 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 CAMSAP2Q08AD1 1489 aa7.04□□□□□ -1.28
PTPN13-208ENST00000511105 KDM5CP41229 1560 aa7.03□□□□□ -1.28
PTPN13-208ENST00000511105 KIAA1107Q9UPP5 1409 aa7.03□□□□□ -1.28
PTPN13-208ENST00000511105 CDK2AP1O14519 115 aa7.03□□□□□ -1.28
PTPN13-208ENST00000511105 RECKO95980 971 aa7.03□□□□□ -1.28
PTPN13-208ENST00000511105 BMP4P12644 408 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms