RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 GLB1P16278 677 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 GTF2IP78347 998 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 INTS5Q6P9B9 1019 aaKnown RBP3.21□□□□□ -1.9
CAST-226ENST00000509529 NCAPD3P42695 1498 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 GRIK1P39086 918 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 PSME1Q06323 249 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 ZBTB42B2RXF5 422 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 PIK3CDO00329 1044 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 HIRAP54198 1017 aaPredicted RBP3.21□□□□□ -1.9
CAST-226ENST00000509529 NFIAQ12857 509 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 ELMSAN1Q6PJG2 1045 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 POTEAQ6S8J7 498 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 ABI1Q8IZP0 508 aa3.21□□□□□ -1.9
CAST-226ENST00000509529 UBL7Q96S82 380 aaPredicted RBP3.21□□□□□ -1.9
CAST-226ENST00000509529 TSPAN10Q9H1Z9 355 aaPredicted RBP3.21□□□□□ -1.9
CAST-226ENST00000509529 TNIKQ9UKE5 1360 aa3.2□□□□□ -1.9
CAST-226ENST00000509529 PRR19A6NJB7 356 aa3.2□□□□□ -1.9
CAST-226ENST00000509529 PSMA6P60900 246 aaKnown RBP3.2□□□□□ -1.9
CAST-226ENST00000509529 MLLT1Q03111 559 aaPredicted RBP3.2□□□□□ -1.9
CAST-226ENST00000509529 CCINQ13939 588 aa3.2□□□□□ -1.9
CAST-226ENST00000509529 POU5F2Q8N7G0 328 aa3.2□□□□□ -1.9
CAST-226ENST00000509529 BAZ1BQ9UIG0 1483 aaKnown RBP3.2□□□□□ -1.9
CAST-226ENST00000509529 ARMC10Q8N2F6 343 aa3.2□□□□□ -1.9
CAST-226ENST00000509529 BAZ1AQ9NRL2 1556 aaPredicted RBP3.2□□□□□ -1.9
CAST-226ENST00000509529 SMG9Q9H0W8 520 aaKnown RBP3.19□□□□□ -1.9
CAST-226ENST00000509529 SMARCA2P51531 1590 aa3.19□□□□□ -1.9
CAST-226ENST00000509529 RSF1Q96T23 1441 aaPredicted RBP3.19□□□□□ -1.9
CAST-226ENST00000509529 DHX15O43143 795 aaKnown RBP3.19□□□□□ -1.9
CAST-226ENST00000509529 GRNP28799 593 aaKnown RBP3.19□□□□□ -1.9
CAST-226ENST00000509529 EML3Q32P44 896 aa3.19□□□□□ -1.9
CAST-226ENST00000509529 TTC9Q92623 222 aa3.19□□□□□ -1.9
CAST-226ENST00000509529 C7orf69Q9H7B7 122 aa3.19□□□□□ -1.9
CAST-226ENST00000509529 ZFATQ9P243 1243 aa3.19□□□□□ -1.9
CAST-226ENST00000509529 NOD1Q9Y239 953 aa3.19□□□□□ -1.9
CAST-226ENST00000509529 PCSK7Q16549 785 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 DHX32Q7L7V1 743 aaKnown RBP3.18□□□□□ -1.9
CAST-226ENST00000509529 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.18□□□□□ -1.9
CAST-226ENST00000509529 TRIM42Q8IWZ5 723 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 TRPM4Q8TD43 1214 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 GOLGA3Q08378 1498 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 HMX2A2RU54 273 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 SETDB1Q15047 1291 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 DBNDD2Q9BQY9 259 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 MAP3K1Q13233 1512 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 MAP3K6O95382 1288 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 GPLD1P80108 840 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 RNF43Q68DV7 783 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 HFE2Q6ZVN8 426 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 KRT25Q7Z3Z0 450 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 ALDH16A1Q8IZ83 802 aa3.18□□□□□ -1.9
CAST-226ENST00000509529 CCER1Q8TC90 406 aaPredicted RBP3.18□□□□□ -1.9
CAST-226ENST00000509529 NCOA4Q13772 614 aa3.17□□□□□ -1.9
CAST-226ENST00000509529 CHMP3Q9Y3E7 222 aa3.17□□□□□ -1.9
CAST-226ENST00000509529 EIF2AK2P19525 551 aaKnown RBP3.17□□□□□ -1.9
CAST-226ENST00000509529 SPOCD1Q6ZMY3 1216 aa3.17□□□□□ -1.9
CAST-226ENST00000509529 WASHC2AQ641Q2 1341 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 WASHC2CQ9Y4E1 1318 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 WISP1O95388 367 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 TARSP26639 723 aaKnown RBP3.16□□□□□ -1.9
CAST-226ENST00000509529 HOXA10P31260 410 aaPredicted RBP3.16□□□□□ -1.9
CAST-226ENST00000509529 SEMA3FQ13275 785 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 FBLN7Q53RD9 439 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 GDF6Q6KF10 455 aaPredicted RBP3.16□□□□□ -1.9
CAST-226ENST00000509529 CBLL1Q75N03 491 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 SHKBP1Q8TBC3 707 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 UTP4Q969X6 686 aaKnown RBP3.16□□□□□ -1.9
CAST-226ENST00000509529 KIAA1024Q9UPX6 916 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 IER5Q5VY09 327 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 IL27Q8NEV9 243 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 TPCN2Q8NHX9 752 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 BCS1LQ9Y276 419 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 CEP164Q9UPV0 1460 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 CCER2I3L3R5 266 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 EIF5BO60841 1220 aaKnown RBP3.16□□□□□ -1.9
CAST-226ENST00000509529 SKIP12755 728 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 IL22RA1Q8N6P7 574 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 FBXO41Q8TF61 875 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 ASIC4Q96FT7 647 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 IFT43Q96FT9 208 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 USP35Q9P2H5 1018 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 DMGDHQ9UI17 866 aaKnown RBP3.16□□□□□ -1.9
CAST-226ENST00000509529 NACADO15069 1562 aa3.16□□□□□ -1.9
CAST-226ENST00000509529 TGFBR3LH3BV60 316 aa3.15□□□□□ -1.9
CAST-226ENST00000509529 C21orf2O43822 256 aa3.15□□□□□ -1.9
CAST-226ENST00000509529 PPP1R12BO60237 982 aaPredicted RBP3.15□□□□□ -1.9
CAST-226ENST00000509529 HIF1AQ16665 826 aa3.15□□□□□ -1.9
CAST-226ENST00000509529 LCE5AQ5TCM9 118 aa3.15□□□□□ -1.9
CAST-226ENST00000509529 DEPDC4Q8N2C3 294 aa3.15□□□□□ -1.9
CAST-226ENST00000509529 PLD4Q96BZ4 506 aa3.15□□□□□ -1.9
CAST-226ENST00000509529 NGLY1Q96IV0 654 aa3.15□□□□□ -1.9
CAST-226ENST00000509529 SRA1Q9HD15 236 aaKnown RBP3.15□□□□□ -1.9
CAST-226ENST00000509529 TIMELESSQ9UNS1 1208 aa3.15□□□□□ -1.9
CAST-226ENST00000509529 ABCA5Q8WWZ7 1642 aa3.15□□□□□ -1.91
CAST-226ENST00000509529 RARAP10276 462 aa3.15□□□□□ -1.91
CAST-226ENST00000509529 UVSSAQ2YD98 709 aa3.15□□□□□ -1.91
CAST-226ENST00000509529 NFXL1Q6ZNB6 911 aa3.15□□□□□ -1.91
CAST-226ENST00000509529 GALNT11Q8NCW6 608 aa3.15□□□□□ -1.91
CAST-226ENST00000509529 FAM46AQ96IP4 442 aaKnown RBP3.15□□□□□ -1.91
CAST-226ENST00000509529 MYRFLQ96LU7 910 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms