RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
TRAPPC13-210ENST00000509234 ATXN7O15265 892 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC13-210ENST00000509234 BNIP3LO60238 219 aa7.41□□□□□ -1.22
TRAPPC13-210ENST00000509234 PPFIA3O75145 1194 aa7.41□□□□□ -1.22
TRAPPC13-210ENST00000509234 P4HBP07237 508 aaKnown RBP7.41□□□□□ -1.22
TRAPPC13-210ENST00000509234 EHHADHQ08426 723 aa7.41□□□□□ -1.22
TRAPPC13-210ENST00000509234 PIK3R5Q8WYR1 880 aa7.41□□□□□ -1.22
TRAPPC13-210ENST00000509234 USP20Q9Y2K6 914 aa7.41□□□□□ -1.22
TRAPPC13-210ENST00000509234 ZNF16P17020 682 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-210ENST00000509234 PDE12Q6L8Q7 609 aaKnown RBP7.4□□□□□ -1.22
TRAPPC13-210ENST00000509234 CEP63Q96MT8 703 aa7.4□□□□□ -1.22
TRAPPC13-210ENST00000509234 STRN4Q9NRL3 753 aa7.4□□□□□ -1.22
TRAPPC13-210ENST00000509234 A6NHS1 94 aa7.39□□□□□ -1.23
TRAPPC13-210ENST00000509234 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
TRAPPC13-210ENST00000509234 SFSWAPQ12872 951 aaKnown RBP7.39□□□□□ -1.23
TRAPPC13-210ENST00000509234 AAMPQ13685 434 aa7.39□□□□□ -1.23
TRAPPC13-210ENST00000509234 FAM182BQ5T319 152 aa7.39□□□□□ -1.23
TRAPPC13-210ENST00000509234 ZNF428Q96B54 188 aa7.39□□□□□ -1.23
TRAPPC13-210ENST00000509234 NEUROD4Q9HD90 331 aa7.39□□□□□ -1.23
TRAPPC13-210ENST00000509234 UNCXA6NJT0 531 aa7.38□□□□□ -1.23
TRAPPC13-210ENST00000509234 EPB42P16452 691 aa7.38□□□□□ -1.23
TRAPPC13-210ENST00000509234 TAGLNQ01995 201 aaKnown RBP7.38□□□□□ -1.23
TRAPPC13-210ENST00000509234 ENOX2Q16206 610 aaKnown RBP7.38□□□□□ -1.23
TRAPPC13-210ENST00000509234 RIPOR1Q6ZS17 1223 aa7.38□□□□□ -1.23
TRAPPC13-210ENST00000509234 CFHR5Q9BXR6 569 aa7.38□□□□□ -1.23
TRAPPC13-210ENST00000509234 ATXN7L1Q9ULK2 861 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-210ENST00000509234 GJA3Q9Y6H8 435 aa7.38□□□□□ -1.23
TRAPPC13-210ENST00000509234 PCSK2P16519 638 aa7.37□□□□□ -1.23
TRAPPC13-210ENST00000509234 GRIN2CQ14957 1233 aa7.37□□□□□ -1.23
TRAPPC13-210ENST00000509234 XP32Q5T750 250 aa7.37□□□□□ -1.23
TRAPPC13-210ENST00000509234 BCL2L13Q9BXK5 485 aa7.37□□□□□ -1.23
TRAPPC13-210ENST00000509234 GSX2Q9BZM3 304 aa7.37□□□□□ -1.23
TRAPPC13-210ENST00000509234 NIF3L1Q9GZT8 377 aa7.37□□□□□ -1.23
TRAPPC13-210ENST00000509234 CHRDQ9H2X0 955 aa7.37□□□□□ -1.23
TRAPPC13-210ENST00000509234 KCNH4Q9UQ05 1017 aa7.37□□□□□ -1.23
TRAPPC13-210ENST00000509234 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 TNFRSF21O75509 655 aa7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 PLCB3Q01970 1234 aa7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 GPAT2Q6NUI2 795 aa7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 CMTR1Q8N1G2 835 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 DNAJC25Q9H1X3 360 aa7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 EFCC1Q9HA90 598 aa7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 TMEM63CQ9P1W3 806 aa7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-210ENST00000509234 ABCC8Q09428 1581 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 UBAP1LF5GYI3 381 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 XYLBO75191 536 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 VSIG8P0DPA2 414 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 ORC1Q13415 861 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 EAPPQ56P03 285 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 NLRP13Q86W25 1043 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 GTPBP3Q969Y2 492 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 ABHD17AQ96GS6 310 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 CSRNP1Q96S65 589 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 ELP3Q9H9T3 547 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 TOPBP1Q92547 1522 aa7.35□□□□□ -1.23
TRAPPC13-210ENST00000509234 VAMP1P23763 118 aa7.34□□□□□ -1.23
TRAPPC13-210ENST00000509234 SNX29Q8TEQ0 813 aa7.34□□□□□ -1.23
TRAPPC13-210ENST00000509234 SLC30A3Q99726 388 aa7.34□□□□□ -1.23
TRAPPC13-210ENST00000509234 MARK1Q9P0L2 795 aa7.34□□□□□ -1.23
TRAPPC13-210ENST00000509234 KIAA1522Q9P206 1035 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC13-210ENST00000509234 ZFATQ9P243 1243 aa7.34□□□□□ -1.23
TRAPPC13-210ENST00000509234 FOXD3Q9UJU5 478 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC13-210ENST00000509234 IFT140Q96RY7 1462 aa7.34□□□□□ -1.23
TRAPPC13-210ENST00000509234 EIF1AYO14602 144 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 CCINQ13939 588 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 GAS6Q14393 721 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 C8orf34Q49A92 452 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 NPM2Q86SE8 214 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 TMC1Q8TDI8 760 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 ZFYVE28Q9HCC9 887 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 CNTN3Q9P232 1028 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 ADAMTS8Q9UP79 889 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
TRAPPC13-210ENST00000509234 ZNF608Q9ULD9 1512 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 RNF225M0QZC1 329 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 PRPF40AO75400 957 aaKnown RBP7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 MAP3K6O95382 1288 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 FGFR3P22607 806 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 MRPL58Q14197 206 aaKnown RBP7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 ZNF438Q7Z4V0 828 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 OR13H1Q8NG92 308 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 FBF1Q8TES7 1133 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 MDFIQ99750 246 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 IGSF5Q9NSI5 407 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 ABI2Q9NYB9 513 aaPredicted RBP7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
TRAPPC13-210ENST00000509234 PNMA6FA0A0J9YX94 578 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 C2CD2LO14523 706 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 CPNE3O75131 537 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 IGHA1P01876 353 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 LDHBP07195 334 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 CD33P20138 364 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 SOX18P35713 384 aa7.31□□□□□ -1.24
TRAPPC13-210ENST00000509234 CTBSQ01459 385 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms