RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 PRAM1Q96QH2 718 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 VPS37CA5D8V6 355 aaPredicted RBP11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 CCDC151A5D8V7 595 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 SGSM2O43147 1006 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 C21orf2O43822 256 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 PPFIA4O75335 1185 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 GGT6Q6P531 493 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 SCAND2PQ9GZW5 306 aaPredicted RBP11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
PDGFRA-207ENST00000509092 CHD2O14647 1828 aaKnown RBP11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 ADGRL3Q9HAR2 1447 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 BRD3Q15059 726 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 PPP2R5AQ15172 486 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 STX1AQ16623 288 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 MAP9Q49MG5 647 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 C11orf57Q6ZUT1 292 aaPredicted RBP11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 RSRC2Q7L4I2 434 aaKnown RBP11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 TSPYL6Q8N831 410 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 TBC1D22AQ8WUA7 517 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 STAG1Q8WVM7 1258 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 RABGGTAQ92696 567 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 PARD6BQ9BYG5 372 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 SETD1AO15047 1707 aaKnown RBP11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 SALL3Q9BXA9 1300 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 EIF3JO75822 258 aaKnown RBP11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 ADRA2BP18089 450 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 C11orf91Q3C1V1 193 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 NBPF11Q86T75 865 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 EPC1Q9H2F5 836 aa11.66□□□□□ -0.54
PDGFRA-207ENST00000509092 IFT172Q9UG01 1749 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 VWDEQ8N2E2 1590 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 BECN2A8MW95 431 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 ANKRD65E5RJM6 399 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 IRF6O14896 467 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 NR1I2O75469 434 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 ERLIN2O94905 339 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 HNRNPH1P31943 449 aaKnown RBP11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 TRIM65Q6PJ69 517 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 PDE11AQ9HCR9 933 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 A1CFQ9NQ94 594 aaKnown RBP11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 AKAP2Q9Y2D5 859 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 AGLP35573 1532 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 KIAA0232Q92628 1395 aa11.65□□□□□ -0.54
PDGFRA-207ENST00000509092 CCDC83Q8IWF9 413 aa11.65□□□□□ -0.55
PDGFRA-207ENST00000509092 JMYQ8N9B5 988 aa11.65□□□□□ -0.55
PDGFRA-207ENST00000509092 SPATA32Q96LK8 384 aa11.65□□□□□ -0.55
PDGFRA-207ENST00000509092 STK26Q9P289 416 aa11.65□□□□□ -0.55
PDGFRA-207ENST00000509092 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.55
PDGFRA-207ENST00000509092 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 HMMRO75330 724 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 SFPQP23246 707 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 GNL2Q13823 731 aaKnown RBP11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 CFAP70Q5T0N1 1121 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 ARMCX5Q6P1M9 558 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 CWC27Q6UX04 472 aaKnown RBP11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 HOMEZQ8IX15 550 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 DHX40Q8IX18 779 aaKnown RBP11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 HNRNPLLQ8WVV9 542 aaKnown RBP11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 KAT2BQ92831 832 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 ZSCAN31Q96LW9 406 aaPredicted RBP11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 SNX14Q9Y5W7 946 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 CDK12Q9NYV4 1490 aaPredicted RBP11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 LARGE1O95461 756 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 PSME1Q06323 249 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 TTLL5Q6EMB2 1281 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 HDXQ7Z353 690 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 SH2B1Q9NRF2 756 aaPredicted RBP11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 FAN1Q9Y2M0 1017 aa11.64□□□□□ -0.55
PDGFRA-207ENST00000509092 SETBP1Q9Y6X0 1596 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 TXLNAP40222 546 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 GNAI1P63096 354 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 GOLGA1Q92805 767 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 RILPL2Q969X0 211 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 MPHOSPH8Q99549 860 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 PREX1Q8TCU6 1659 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 NRXN1Q9ULB1 1477 aa11.63□□□□□ -0.55
PDGFRA-207ENST00000509092 FANCGO15287 622 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 CTAGE5O15320 804 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 VPS53Q5VIR6 699 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 NBPF6Q5VWK0 638 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 KCNV1Q6PIU1 500 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 GIMAP7Q8NHV1 300 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 FAM71BQ8TC56 605 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 NBPF4Q96M43 638 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 GNL3LQ9NVN8 582 aaKnown RBP11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 TET3O43151 1660 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 SCP2P22307 547 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 PLEKHO1Q53GL0 409 aaPredicted RBP11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 GBP6Q6ZN66 633 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 BICD2Q8TD16 824 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
PDGFRA-207ENST00000509092 SETQ01105 290 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms