RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 NCOA3Q9Y6Q9 1424 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 INHAP05111 366 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 LCE2AQ5TA79 106 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 OGFOD1Q8N543 542 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 NLRP3Q96P20 1036 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 AMOTL2Q9Y2J4 779 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 NKTRP30414 1462 aaKnown RBP7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 RALGAPBQ86X10 1494 aa7.73□□□□□ -1.17
HMGB1P44-201ENST00000508597 ROCK2O75116 1388 aaKnown RBP7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 METP08581 1390 aa7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 KNDC1Q76NI1 1749 aa7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 ADGRB1O14514 1584 aa7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 PTCH1Q13635 1447 aa7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 YTHDC2Q9H6S0 1430 aaKnown RBP7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 TERTO14746 1132 aaKnown RBP7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 LZTS3O60299 673 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 NFX1Q12986 1120 aaKnown RBP7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 NBPF8Q3BBV2 869 aa7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 CRTC2Q53ET0 693 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 LYSMD3Q7Z3D4 306 aa7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 DLC1Q96QB1 1528 aa7.72□□□□□ -1.17
HMGB1P44-201ENST00000508597 FAM135BQ49AJ0 1406 aa7.71□□□□□ -1.17
HMGB1P44-201ENST00000508597 SLC35F4A4IF30 521 aa7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 SFI1A8K8P3 1242 aa7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 LGR5O75473 907 aa7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 PHKA2P46019 1235 aa7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 ZNF594Q96JF6 807 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 ZNF358Q9NW07 568 aa7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 CUEDC1Q9NWM3 386 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 NXF1Q9UBU9 619 aaKnown RBP7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 XRN1Q8IZH2 1706 aaKnown RBP7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 EIF3AQ14152 1382 aaKnown RBP7.71□□□□□ -1.18
HMGB1P44-201ENST00000508597 PTPRUQ92729 1446 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 IQSEC2Q5JU85 1478 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 ASXL1Q8IXJ9 1541 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 PPFIA3O75145 1194 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 GPC1P35052 558 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 NBPF1Q3BBV0 1214 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 SLC27A3Q5K4L6 730 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 CCDC102BQ68D86 513 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 TMEM132EQ6IEE7 984 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 TPCN2Q8NHX9 752 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 GAS2L2Q8NHY3 880 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 SLC4A9Q96Q91 983 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 CARD11Q9BXL7 1154 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 DNAAF2Q9NVR5 837 aaKnown RBP7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 ZNF335Q9H4Z2 1342 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P44-201ENST00000508597 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 RASA1P20936 1047 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 SMTNP53814 917 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 PSME1Q06323 249 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 PTK7Q13308 1070 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 TNS4Q8IZW8 715 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 ZNF295-AS1Q8N0V1 137 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 CCDC155Q8N6L0 562 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 ZSCAN10Q96SZ4 725 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 LTBP4Q8N2S1 1624 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 STRCP1A6NGW2 1772 aa7.69□□□□□ -1.18
HMGB1P44-201ENST00000508597 SPATA31C2B4DYI2 1134 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 WASLO00401 505 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 EPHA4P54764 986 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 TLR1Q15399 786 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 C4orf17Q53FE4 359 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 ESCO1Q5FWF5 840 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 TBCELQ5QJ74 424 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 TREML4Q6UXN2 200 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 NBPF15Q8N660 670 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 VRTNQ9H8Y1 702 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 POGKQ9P215 609 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 STK26Q9P289 416 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 IQSEC3Q9UPP2 1182 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 TRAK1Q9UPV9 953 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 LRRC7Q96NW7 1537 aa7.68□□□□□ -1.18
HMGB1P44-201ENST00000508597 H3BM21 787 aa7.67□□□□□ -1.18
HMGB1P44-201ENST00000508597 TRIM50Q86XT4 487 aa7.67□□□□□ -1.18
HMGB1P44-201ENST00000508597 GPR161Q8N6U8 529 aaKnown RBP7.67□□□□□ -1.18
HMGB1P44-201ENST00000508597 C19orf44Q9H6X5 657 aa7.67□□□□□ -1.18
HMGB1P44-201ENST00000508597 CENPJQ9HC77 1338 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P44-201ENST00000508597 ROBO2Q9HCK4 1378 aa7.67□□□□□ -1.18
HMGB1P44-201ENST00000508597 SBNO2Q9Y2G9 1366 aa7.67□□□□□ -1.18
HMGB1P44-201ENST00000508597 DCCP43146 1447 aa7.67□□□□□ -1.18
HMGB1P44-201ENST00000508597 ARHGEF28Q8N1W1 1705 aaKnown RBP7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 A6NJY4 79 aa7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 MTFR1Q15390 333 aa7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 SIX5Q8N196 739 aa7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 LARGE2Q8N3Y3 721 aa7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 PRAM1Q96QH2 718 aa7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 PARP3Q9Y6F1 533 aa7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 TMEM94Q12767 1356 aa7.66□□□□□ -1.18
HMGB1P44-201ENST00000508597 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
HMGB1P44-201ENST00000508597 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
HMGB1P44-201ENST00000508597 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
HMGB1P44-201ENST00000508597 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
HMGB1P44-201ENST00000508597 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
HMGB1P44-201ENST00000508597 USP17L21D6R901 530 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms