RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 KIF23Q02241 960 aaPredicted RBP18.51■□□□□ 0.55
DDR1-260ENST00000507533 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
DDR1-260ENST00000507533 RNF186Q9NXI6 227 aa18.51■□□□□ 0.55
DDR1-260ENST00000507533 MYL6BP14649 208 aa18.5■□□□□ 0.55
DDR1-260ENST00000507533 KIAA2012Q0VF49 1180 aa18.5■□□□□ 0.55
DDR1-260ENST00000507533 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
DDR1-260ENST00000507533 MPNDQ8N594 471 aa18.5■□□□□ 0.55
DDR1-260ENST00000507533 CCDC102AQ96A19 550 aa18.5■□□□□ 0.55
DDR1-260ENST00000507533 ABCC4O15439 1325 aa18.49■□□□□ 0.55
DDR1-260ENST00000507533 HTATSF1O43719 755 aaKnown RBP18.49■□□□□ 0.55
DDR1-260ENST00000507533 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
DDR1-260ENST00000507533 MICALL2Q8IY33 904 aa18.49■□□□□ 0.55
DDR1-260ENST00000507533 C2orf69Q8N8R5 385 aa18.49■□□□□ 0.55
DDR1-260ENST00000507533 CFAP53Q96M91 514 aa18.49■□□□□ 0.55
DDR1-260ENST00000507533 GBA2Q9HCG7 927 aaPredicted RBP18.49■□□□□ 0.55
DDR1-260ENST00000507533 BBOX1O75936 387 aa18.48■□□□□ 0.55
DDR1-260ENST00000507533 ZNF157P51786 506 aaPredicted RBP18.48■□□□□ 0.55
DDR1-260ENST00000507533 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
DDR1-260ENST00000507533 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
DDR1-260ENST00000507533 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
DDR1-260ENST00000507533 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
DDR1-260ENST00000507533 SLC10A5Q5PT55 438 aa18.47■□□□□ 0.55
DDR1-260ENST00000507533 GIGYF2Q6Y7W6 1299 aaKnown RBP18.47■□□□□ 0.55
DDR1-260ENST00000507533 KRT26Q7Z3Y9 468 aa18.47■□□□□ 0.55
DDR1-260ENST00000507533 CTU1Q7Z7A3 348 aaKnown RBP18.47■□□□□ 0.55
DDR1-260ENST00000507533 YDJCA8MPS7 323 aa18.46■□□□□ 0.55
DDR1-260ENST00000507533 SAMD7Q7Z3H4 446 aa18.46■□□□□ 0.55
DDR1-260ENST00000507533 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
DDR1-260ENST00000507533 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
DDR1-260ENST00000507533 NUP98P52948 1817 aa18.45■□□□□ 0.54
DDR1-260ENST00000507533 TBC1D10BQ4KMP7 808 aaPredicted RBP18.45■□□□□ 0.54
DDR1-260ENST00000507533 CSRNP1Q96S65 589 aa18.45■□□□□ 0.54
DDR1-260ENST00000507533 ADM5C9JUS6 153 aa18.44■□□□□ 0.54
DDR1-260ENST00000507533 PNISRQ8TF01 805 aaKnown RBP18.44■□□□□ 0.54
DDR1-260ENST00000507533 DPF2Q92785 391 aa18.44■□□□□ 0.54
DDR1-260ENST00000507533 DCPSQ96C86 337 aaKnown RBP18.44■□□□□ 0.54
DDR1-260ENST00000507533 HPS5Q9UPZ3 1129 aa18.44■□□□□ 0.54
DDR1-260ENST00000507533 SLC10A3P09131 477 aa18.43■□□□□ 0.54
DDR1-260ENST00000507533 EIF4A1P60842 406 aaKnown RBP18.43■□□□□ 0.54
DDR1-260ENST00000507533 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
DDR1-260ENST00000507533 PSMD14O00487 310 aa18.42■□□□□ 0.54
DDR1-260ENST00000507533 EGFRP00533 1210 aa18.42■□□□□ 0.54
DDR1-260ENST00000507533 RBM26Q5T8P6 1007 aaKnown RBP18.42■□□□□ 0.54
DDR1-260ENST00000507533 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
DDR1-260ENST00000507533 HCLS1P14317 486 aaPredicted RBP18.41■□□□□ 0.54
DDR1-260ENST00000507533 GRAPQ13588 217 aa18.41■□□□□ 0.54
DDR1-260ENST00000507533 GRAPLQ8TC17 118 aaPredicted RBP18.41■□□□□ 0.54
DDR1-260ENST00000507533 REM2Q8IYK8 340 aaPredicted RBP18.4■□□□□ 0.54
DDR1-260ENST00000507533 PKN2Q16513 984 aaKnown RBP18.39■□□□□ 0.53
DDR1-260ENST00000507533 WASHC4Q2M389 1173 aa18.39■□□□□ 0.53
DDR1-260ENST00000507533 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
DDR1-260ENST00000507533 DBNDD1Q9H9R9 158 aa18.39■□□□□ 0.53
DDR1-260ENST00000507533 RPS12P25398 132 aaKnown RBP18.38■□□□□ 0.53
DDR1-260ENST00000507533 SULF1Q8IWU6 871 aa18.38■□□□□ 0.53
DDR1-260ENST00000507533 HDAC9Q9UKV0 1011 aa18.38■□□□□ 0.53
DDR1-260ENST00000507533 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
DDR1-260ENST00000507533 RIMBP2O15034 1052 aa18.37■□□□□ 0.53
DDR1-260ENST00000507533 TMC4Q7Z404 712 aa18.37■□□□□ 0.53
DDR1-260ENST00000507533 GCC1Q96CN9 775 aa18.37■□□□□ 0.53
DDR1-260ENST00000507533 KIF4BQ2VIQ3 1234 aa18.36■□□□□ 0.53
DDR1-260ENST00000507533 NLRP10Q86W26 655 aa18.36■□□□□ 0.53
DDR1-260ENST00000507533 RASAL3Q86YV0 1011 aa18.36■□□□□ 0.53
DDR1-260ENST00000507533 CDCA5Q96FF9 252 aa18.36■□□□□ 0.53
DDR1-260ENST00000507533 KCNQ5Q9NR82 932 aa18.36■□□□□ 0.53
DDR1-260ENST00000507533 GGA3Q9NZ52 723 aa18.36■□□□□ 0.53
DDR1-260ENST00000507533 PDIA6Q15084 440 aa18.35■□□□□ 0.53
DDR1-260ENST00000507533 LRP10Q7Z4F1 713 aa18.35■□□□□ 0.53
DDR1-260ENST00000507533 TRMT112Q9UI30 125 aaKnown RBP18.35■□□□□ 0.53
DDR1-260ENST00000507533 NSFL1CQ9UNZ2 370 aaKnown RBP18.35■□□□□ 0.53
DDR1-260ENST00000507533 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
DDR1-260ENST00000507533 C6orf229H3BNL8 230 aa18.34■□□□□ 0.53
DDR1-260ENST00000507533 ECE2O60344 883 aa18.34■□□□□ 0.53
DDR1-260ENST00000507533 DOK7Q18PE1 504 aa18.34■□□□□ 0.53
DDR1-260ENST00000507533 HSP90AB3PQ58FF7 597 aa18.34■□□□□ 0.53
DDR1-260ENST00000507533 ZNF296Q8WUU4 475 aaPredicted RBP18.34■□□□□ 0.53
DDR1-260ENST00000507533 AKAP11Q9UKA4 1901 aa18.33■□□□□ 0.53
DDR1-260ENST00000507533 RTL9Q8NET4 1388 aa18.33■□□□□ 0.53
DDR1-260ENST00000507533 ASTN2O75129 1339 aaPredicted RBP18.33■□□□□ 0.53
DDR1-260ENST00000507533 SH3TC1Q8TE82 1336 aa18.33■□□□□ 0.53
DDR1-260ENST00000507533 TBC1D8O95759 1140 aa18.33■□□□□ 0.52
DDR1-260ENST00000507533 NEFMP07197 916 aa18.33■□□□□ 0.52
DDR1-260ENST00000507533 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
DDR1-260ENST00000507533 PPP2R1AP30153 589 aa18.33■□□□□ 0.52
DDR1-260ENST00000507533 POLLQ9UGP5 575 aa18.33■□□□□ 0.52
DDR1-260ENST00000507533 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
DDR1-260ENST00000507533 ANXA1P04083 346 aa18.32■□□□□ 0.52
DDR1-260ENST00000507533 PROSER3Q2NL68 480 aa18.32■□□□□ 0.52
DDR1-260ENST00000507533 EYA3Q99504 573 aa18.32■□□□□ 0.52
DDR1-260ENST00000507533 FKBP1BP68106 108 aa18.31■□□□□ 0.52
DDR1-260ENST00000507533 GPSM2P81274 684 aa18.31■□□□□ 0.52
DDR1-260ENST00000507533 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
DDR1-260ENST00000507533 AIMP1Q12904 312 aaKnown RBP18.3■□□□□ 0.52
DDR1-260ENST00000507533 TCIRG1Q13488 830 aa18.3■□□□□ 0.52
DDR1-260ENST00000507533 SCARF1Q14162 830 aa18.3■□□□□ 0.52
DDR1-260ENST00000507533 HABP4Q5JVS0 413 aaKnown RBP18.3■□□□□ 0.52
DDR1-260ENST00000507533 ANGEL2Q5VTE6 544 aaKnown RBP18.3■□□□□ 0.52
DDR1-260ENST00000507533 FBXO46Q6PJ61 603 aaPredicted RBP18.3■□□□□ 0.52
DDR1-260ENST00000507533 COPS6Q7L5N1 327 aa18.3■□□□□ 0.52
DDR1-260ENST00000507533 CELF1Q92879 486 aaKnown RBP18.3■□□□□ 0.52
DDR1-260ENST00000507533 ANKRD36CQ5JPF3 1778 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms