RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 KIAA2012Q0VF49 1180 aa12.53□□□□□ -0.4
COL6A4P2-203ENST00000507516 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
COL6A4P2-203ENST00000507516 DLK2Q6UY11 383 aa12.53□□□□□ -0.4
COL6A4P2-203ENST00000507516 CTU1Q7Z7A3 348 aaKnown RBP12.53□□□□□ -0.4
COL6A4P2-203ENST00000507516 ZBTB3Q9H5J0 574 aa12.53□□□□□ -0.4
COL6A4P2-203ENST00000507516 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
COL6A4P2-203ENST00000507516 SHTN1A0MZ66 631 aa12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 ZNF157P51786 506 aaPredicted RBP12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 PPP1R42Q7Z4L9 355 aa12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 ZNF34Q8IZ26 560 aa12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 MPNDQ8N594 471 aa12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 C2orf69Q8N8R5 385 aa12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.41
COL6A4P2-203ENST00000507516 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
COL6A4P2-203ENST00000507516 MYL6BP14649 208 aa12.51□□□□□ -0.41
COL6A4P2-203ENST00000507516 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
COL6A4P2-203ENST00000507516 PARP10Q53GL7 1025 aa12.51□□□□□ -0.41
COL6A4P2-203ENST00000507516 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
COL6A4P2-203ENST00000507516 SP8Q8IXZ3 490 aa12.51□□□□□ -0.41
COL6A4P2-203ENST00000507516 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
COL6A4P2-203ENST00000507516 ABCC4O15439 1325 aa12.51□□□□□ -0.41
COL6A4P2-203ENST00000507516 BBOX1O75936 387 aa12.5□□□□□ -0.41
COL6A4P2-203ENST00000507516 GIGYF2Q6Y7W6 1299 aaKnown RBP12.5□□□□□ -0.41
COL6A4P2-203ENST00000507516 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
COL6A4P2-203ENST00000507516 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
COL6A4P2-203ENST00000507516 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
COL6A4P2-203ENST00000507516 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
COL6A4P2-203ENST00000507516 NUDCQ9Y266 331 aa12.5□□□□□ -0.41
COL6A4P2-203ENST00000507516 YDJCA8MPS7 323 aa12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 SLC10A3P09131 477 aa12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 TBC1D10BQ4KMP7 808 aaPredicted RBP12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 SLC10A5Q5PT55 438 aa12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 DPF2Q92785 391 aa12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 DCPSQ96C86 337 aaKnown RBP12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 CSRNP1Q96S65 589 aa12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 UTP14AQ9BVJ6 771 aaKnown RBP12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
COL6A4P2-203ENST00000507516 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
COL6A4P2-203ENST00000507516 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL6A4P2-203ENST00000507516 PNISRQ8TF01 805 aaKnown RBP12.48□□□□□ -0.41
COL6A4P2-203ENST00000507516 GCC1Q96CN9 775 aa12.48□□□□□ -0.41
COL6A4P2-203ENST00000507516 PSMD14O00487 310 aa12.47□□□□□ -0.41
COL6A4P2-203ENST00000507516 EGFRP00533 1210 aa12.47□□□□□ -0.41
COL6A4P2-203ENST00000507516 PKN2Q16513 984 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-203ENST00000507516 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-203ENST00000507516 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
COL6A4P2-203ENST00000507516 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
COL6A4P2-203ENST00000507516 GRAPQ13588 217 aa12.46□□□□□ -0.41
COL6A4P2-203ENST00000507516 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.41
COL6A4P2-203ENST00000507516 SULF1Q8IWU6 871 aa12.46□□□□□ -0.41
COL6A4P2-203ENST00000507516 GRAPLQ8TC17 118 aaPredicted RBP12.46□□□□□ -0.41
COL6A4P2-203ENST00000507516 HDAC9Q9UKV0 1011 aa12.46□□□□□ -0.41
COL6A4P2-203ENST00000507516 ERBB4Q15303 1308 aa12.45□□□□□ -0.42
COL6A4P2-203ENST00000507516 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
COL6A4P2-203ENST00000507516 RPS12P25398 132 aaKnown RBP12.45□□□□□ -0.42
COL6A4P2-203ENST00000507516 WASHC4Q2M389 1173 aa12.45□□□□□ -0.42
COL6A4P2-203ENST00000507516 RASAL3Q86YV0 1011 aa12.45□□□□□ -0.42
COL6A4P2-203ENST00000507516 DBNDD1Q9H9R9 158 aa12.45□□□□□ -0.42
COL6A4P2-203ENST00000507516 KIF4BQ2VIQ3 1234 aa12.44□□□□□ -0.42
COL6A4P2-203ENST00000507516 TMC4Q7Z404 712 aa12.44□□□□□ -0.42
COL6A4P2-203ENST00000507516 CDCA5Q96FF9 252 aa12.44□□□□□ -0.42
COL6A4P2-203ENST00000507516 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
COL6A4P2-203ENST00000507516 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
COL6A4P2-203ENST00000507516 ZNF296Q8WUU4 475 aaPredicted RBP12.43□□□□□ -0.42
COL6A4P2-203ENST00000507516 RIMBP2O15034 1052 aa12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 TBC1D8O95759 1140 aa12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 FKBP1BP68106 108 aa12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 HABP4Q5JVS0 413 aaKnown RBP12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 NLRP10Q86W26 655 aa12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 THUMPD2Q9BTF0 503 aaKnown RBP12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 DUOX1Q9NRD9 1551 aa12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 RTL9Q8NET4 1388 aa12.42□□□□□ -0.42
COL6A4P2-203ENST00000507516 ASTN2O75129 1339 aaPredicted RBP12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 C6orf229H3BNL8 230 aa12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 ECE2O60344 883 aa12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 HSP90AB3PQ58FF7 597 aa12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 FBXO46Q6PJ61 603 aaPredicted RBP12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 LRP10Q7Z4F1 713 aa12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 KCNQ5Q9NR82 932 aa12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 TRMT112Q9UI30 125 aaKnown RBP12.41□□□□□ -0.42
COL6A4P2-203ENST00000507516 NUP98P52948 1817 aa12.4□□□□□ -0.42
COL6A4P2-203ENST00000507516 NEFMP07197 916 aa12.4□□□□□ -0.42
COL6A4P2-203ENST00000507516 PDIA6Q15084 440 aa12.4□□□□□ -0.42
COL6A4P2-203ENST00000507516 EYA3Q99504 573 aa12.4□□□□□ -0.42
COL6A4P2-203ENST00000507516 POLLQ9UGP5 575 aa12.4□□□□□ -0.42
COL6A4P2-203ENST00000507516 GPR25O00155 361 aa12.39□□□□□ -0.43
COL6A4P2-203ENST00000507516 ANXA1P04083 346 aa12.39□□□□□ -0.43
COL6A4P2-203ENST00000507516 EIF2S2P20042 333 aaKnown RBP12.39□□□□□ -0.43
COL6A4P2-203ENST00000507516 GPSM2P81274 684 aa12.39□□□□□ -0.43
COL6A4P2-203ENST00000507516 PROSER3Q2NL68 480 aa12.39□□□□□ -0.43
COL6A4P2-203ENST00000507516 ANGEL2Q5VTE6 544 aaKnown RBP12.39□□□□□ -0.43
COL6A4P2-203ENST00000507516 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
COL6A4P2-203ENST00000507516 SCARF1Q14162 830 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms