RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 VPS33BQ9H267 617 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 R3HDMLQ9H3Y0 253 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 USP16Q9Y5T5 823 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 ANKRD26Q9UPS8 1709 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 SCN11AQ9UI33 1791 aa9.83□□□□□ -0.84
VCAN-207ENST00000507162 SNED1Q8TER0 1413 aa9.83□□□□□ -0.84
VCAN-207ENST00000507162 POLR2AP24928 1970 aaKnown RBP9.83□□□□□ -0.84
VCAN-207ENST00000507162 EGFRP00533 1210 aa9.83□□□□□ -0.84
VCAN-207ENST00000507162 HMOX1P09601 288 aa9.83□□□□□ -0.84
VCAN-207ENST00000507162 HLFQ16534 295 aa9.83□□□□□ -0.84
VCAN-207ENST00000507162 CRAMP1Q96RY5 1269 aa9.83□□□□□ -0.84
VCAN-207ENST00000507162 RBM27Q9P2N5 1060 aaKnown RBP9.83□□□□□ -0.84
VCAN-207ENST00000507162 CDHR2Q9BYE9 1310 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 UBE2Q2LH0YL09 131 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 KCNQ3O43525 872 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 HOXA10P31260 410 aaPredicted RBP9.82□□□□□ -0.84
VCAN-207ENST00000507162 IL13P35225 146 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 TM4SF4P48230 202 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 DPP8Q6V1X1 898 aaPredicted RBP9.82□□□□□ -0.84
VCAN-207ENST00000507162 MOB2Q70IA6 237 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 CDCA5Q96FF9 252 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 NYXQ9GZU5 481 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 BCORQ6W2J9 1755 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 CENPFP49454 3210 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 RANBP2P49792 3224 aaKnown RBP9.82□□□□□ -0.84
VCAN-207ENST00000507162 PITPNM2Q9BZ72 1349 aa9.82□□□□□ -0.84
VCAN-207ENST00000507162 YDJCA8MPS7 323 aa9.81□□□□□ -0.84
VCAN-207ENST00000507162 MPNDQ8N594 471 aa9.81□□□□□ -0.84
VCAN-207ENST00000507162 NGEFQ8N5V2 710 aa9.81□□□□□ -0.84
VCAN-207ENST00000507162 DPF3Q92784 378 aa9.81□□□□□ -0.84
VCAN-207ENST00000507162 DPF2Q92785 391 aa9.81□□□□□ -0.84
VCAN-207ENST00000507162 ATP6V0A2Q9Y487 856 aa9.81□□□□□ -0.84
VCAN-207ENST00000507162 SCN7AQ01118 1682 aa9.8□□□□□ -0.84
VCAN-207ENST00000507162 PSMD14O00487 310 aa9.8□□□□□ -0.84
VCAN-207ENST00000507162 MYCP01106 439 aaPredicted RBP9.8□□□□□ -0.84
VCAN-207ENST00000507162 KIAA2012Q0VF49 1180 aa9.8□□□□□ -0.84
VCAN-207ENST00000507162 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
VCAN-207ENST00000507162 SLC4A8Q2Y0W8 1093 aa9.8□□□□□ -0.84
VCAN-207ENST00000507162 NOM1Q5C9Z4 860 aaKnown RBP9.8□□□□□ -0.84
VCAN-207ENST00000507162 OTOP1Q7RTM1 612 aa9.8□□□□□ -0.84
VCAN-207ENST00000507162 GGA3Q9NZ52 723 aa9.8□□□□□ -0.84
VCAN-207ENST00000507162 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
VCAN-207ENST00000507162 ASTN2O75129 1339 aaPredicted RBP9.8□□□□□ -0.84
VCAN-207ENST00000507162 MRC1P22897 1456 aa9.79□□□□□ -0.84
VCAN-207ENST00000507162 HTTP42858 3142 aa9.79□□□□□ -0.84
VCAN-207ENST00000507162 ABCC12Q96J65 1359 aa9.79□□□□□ -0.84
VCAN-207ENST00000507162 SLC4A2P04920 1241 aa9.79□□□□□ -0.84
VCAN-207ENST00000507162 MORC1Q86VD1 984 aa9.79□□□□□ -0.84
VCAN-207ENST00000507162 IL17REQ8NFR9 667 aa9.79□□□□□ -0.84
VCAN-207ENST00000507162 RTFDC1Q9BY42 306 aaPredicted RBP9.79□□□□□ -0.84
VCAN-207ENST00000507162 PTPN22Q9Y2R2 807 aa9.79□□□□□ -0.84
VCAN-207ENST00000507162 KIF7Q2M1P5 1343 aa9.79□□□□□ -0.84
VCAN-207ENST00000507162 BTBD11A6QL63 1104 aa9.78□□□□□ -0.84
VCAN-207ENST00000507162 GPTP24298 496 aa9.78□□□□□ -0.84
VCAN-207ENST00000507162 FKBP1BP68106 108 aa9.78□□□□□ -0.84
VCAN-207ENST00000507162 SREBF2Q12772 1141 aa9.78□□□□□ -0.84
VCAN-207ENST00000507162 KIF4BQ2VIQ3 1234 aa9.78□□□□□ -0.84
VCAN-207ENST00000507162 PRAMEF18Q5VWM3 479 aa9.78□□□□□ -0.84
VCAN-207ENST00000507162 C3orf67Q6ZVT6 689 aa9.78□□□□□ -0.84
VCAN-207ENST00000507162 NLRP3Q96P20 1036 aa9.78□□□□□ -0.84
VCAN-207ENST00000507162 SCAF8Q9UPN6 1271 aaKnown RBP9.78□□□□□ -0.84
VCAN-207ENST00000507162 NBPF26B4DH59 902 aa9.77□□□□□ -0.85
VCAN-207ENST00000507162 HAX1O00165 279 aa9.77□□□□□ -0.85
VCAN-207ENST00000507162 RIMBP2O15034 1052 aa9.77□□□□□ -0.85
VCAN-207ENST00000507162 SCARF1Q14162 830 aa9.77□□□□□ -0.85
VCAN-207ENST00000507162 ANGEL2Q5VTE6 544 aaKnown RBP9.77□□□□□ -0.85
VCAN-207ENST00000507162 SUSD4Q5VX71 490 aa9.77□□□□□ -0.85
VCAN-207ENST00000507162 NBPF10Q6P3W6 841 aaKnown RBP9.77□□□□□ -0.85
VCAN-207ENST00000507162 COL25A1Q9BXS0 654 aaPredicted RBP9.77□□□□□ -0.85
VCAN-207ENST00000507162 DBNDD1Q9H9R9 158 aa9.77□□□□□ -0.85
VCAN-207ENST00000507162 BRCA2P51587 3418 aa9.77□□□□□ -0.85
VCAN-207ENST00000507162 GNAT3A8MTJ3 354 aa9.76□□□□□ -0.85
VCAN-207ENST00000507162 SNRPA1P09661 255 aaKnown RBP9.76□□□□□ -0.85
VCAN-207ENST00000507162 SP8Q8IXZ3 490 aa9.76□□□□□ -0.85
VCAN-207ENST00000507162 CD99L2Q8TCZ2 262 aa9.76□□□□□ -0.85
VCAN-207ENST00000507162 ARMC5Q96C12 935 aa9.76□□□□□ -0.85
VCAN-207ENST00000507162 EFCC1Q9HA90 598 aa9.76□□□□□ -0.85
VCAN-207ENST00000507162 KCNQ5Q9NR82 932 aa9.76□□□□□ -0.85
VCAN-207ENST00000507162 WTIPA6NIX2 430 aaPredicted RBP9.75□□□□□ -0.85
VCAN-207ENST00000507162 RGL2O15211 777 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 BBOX1O75936 387 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 ALDH1A1P00352 501 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 RPS12P25398 132 aaKnown RBP9.75□□□□□ -0.85
VCAN-207ENST00000507162 TCIRG1Q13488 830 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 WASHC4Q2M389 1173 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 ERO1AQ96HE7 468 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 LRCH3Q96II8 777 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 PAPPA2Q9BXP8 1791 aa9.75□□□□□ -0.85
VCAN-207ENST00000507162 SOX1O00570 391 aaPredicted RBP9.74□□□□□ -0.85
VCAN-207ENST00000507162 PRKG1Q13976 671 aa9.74□□□□□ -0.85
VCAN-207ENST00000507162 CFHR5Q9BXR6 569 aa9.74□□□□□ -0.85
VCAN-207ENST00000507162 ABCC4O15439 1325 aa9.74□□□□□ -0.85
VCAN-207ENST00000507162 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
VCAN-207ENST00000507162 PTPN12Q05209 780 aaKnown RBP9.73□□□□□ -0.85
VCAN-207ENST00000507162 SLC9C1Q4G0N8 1177 aa9.73□□□□□ -0.85
VCAN-207ENST00000507162 ZNF333Q96JL9 665 aa9.73□□□□□ -0.85
VCAN-207ENST00000507162 PANK3Q9H999 370 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms