RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
CLCN3-205ENST00000506924 KCNQ2O43526 872 aa12.73□□□□□ -0.37
CLCN3-205ENST00000506924 DIAPH1O60610 1272 aaKnown RBP12.73□□□□□ -0.37
CLCN3-205ENST00000506924 APBA3O96018 575 aa12.73□□□□□ -0.37
CLCN3-205ENST00000506924 HMOX1P09601 288 aa12.73□□□□□ -0.37
CLCN3-205ENST00000506924 SULT6B1Q6IMI4 303 aa12.73□□□□□ -0.37
CLCN3-205ENST00000506924 ARMC2Q8NEN0 867 aa12.73□□□□□ -0.37
CLCN3-205ENST00000506924 TRIM34Q9BYJ4 488 aa12.73□□□□□ -0.37
CLCN3-205ENST00000506924 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
CLCN3-205ENST00000506924 RGPD1P0DJD0 1748 aa12.72□□□□□ -0.37
CLCN3-205ENST00000506924 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
CLCN3-205ENST00000506924 TNS1Q9HBL0 1735 aaKnown RBP12.72□□□□□ -0.37
CLCN3-205ENST00000506924 U2SURPO15042 1029 aaKnown RBP12.72□□□□□ -0.37
CLCN3-205ENST00000506924 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
CLCN3-205ENST00000506924 SBF2Q86WG5 1849 aa12.72□□□□□ -0.37
CLCN3-205ENST00000506924 NCAPD2Q15021 1401 aa12.71□□□□□ -0.37
CLCN3-205ENST00000506924 BAG6P46379 1132 aa12.71□□□□□ -0.37
CLCN3-205ENST00000506924 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.37
CLCN3-205ENST00000506924 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
CLCN3-205ENST00000506924 A6NJR5 290 aa12.7□□□□□ -0.38
CLCN3-205ENST00000506924 CYP27B1O15528 508 aa12.7□□□□□ -0.38
CLCN3-205ENST00000506924 RAD21O60216 631 aa12.7□□□□□ -0.38
CLCN3-205ENST00000506924 EZH2Q15910 746 aaKnown RBP12.7□□□□□ -0.38
CLCN3-205ENST00000506924 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
CLCN3-205ENST00000506924 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
CLCN3-205ENST00000506924 COL3A1P02461 1466 aaPredicted RBP12.7□□□□□ -0.38
CLCN3-205ENST00000506924 CTHP32929 405 aa12.69□□□□□ -0.38
CLCN3-205ENST00000506924 NR6A1Q15406 480 aa12.69□□□□□ -0.38
CLCN3-205ENST00000506924 MAP10Q9P2G4 905 aa12.69□□□□□ -0.38
CLCN3-205ENST00000506924 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
CLCN3-205ENST00000506924 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
CLCN3-205ENST00000506924 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
CLCN3-205ENST00000506924 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
CLCN3-205ENST00000506924 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
CLCN3-205ENST00000506924 RPIAP49247 311 aa12.67□□□□□ -0.38
CLCN3-205ENST00000506924 RALBP1Q15311 655 aa12.67□□□□□ -0.38
CLCN3-205ENST00000506924 PLEKHO1Q53GL0 409 aaPredicted RBP12.67□□□□□ -0.38
CLCN3-205ENST00000506924 UNC93B1Q9H1C4 597 aa12.67□□□□□ -0.38
CLCN3-205ENST00000506924 COG6Q9Y2V7 657 aa12.67□□□□□ -0.38
CLCN3-205ENST00000506924 BCL9O00512 1426 aa12.67□□□□□ -0.38
CLCN3-205ENST00000506924 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
CLCN3-205ENST00000506924 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-205ENST00000506924 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLCN3-205ENST00000506924 ZNF530Q6P9A1 599 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-205ENST00000506924 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
CLCN3-205ENST00000506924 FKBPLQ9UIM3 349 aa12.66□□□□□ -0.38
CLCN3-205ENST00000506924 NHSQ6T4R5 1651 aa12.66□□□□□ -0.38
CLCN3-205ENST00000506924 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-205ENST00000506924 ZBTB24O43167 697 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-205ENST00000506924 PHKG2P15735 406 aa12.65□□□□□ -0.38
CLCN3-205ENST00000506924 NBPF14Q5TI25 921 aa12.65□□□□□ -0.38
CLCN3-205ENST00000506924 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
CLCN3-205ENST00000506924 ZMYND15Q9H091 742 aa12.65□□□□□ -0.38
CLCN3-205ENST00000506924 KDRP35968 1356 aa12.65□□□□□ -0.38
CLCN3-205ENST00000506924 BTAF1O14981 1849 aa12.65□□□□□ -0.39
CLCN3-205ENST00000506924 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
CLCN3-205ENST00000506924 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
CLCN3-205ENST00000506924 EPS8L1Q8TE68 723 aa12.64□□□□□ -0.39
CLCN3-205ENST00000506924 PRKRIP1Q9H875 184 aaPredicted RBP12.64□□□□□ -0.39
CLCN3-205ENST00000506924 NUDCQ9Y266 331 aa12.64□□□□□ -0.39
CLCN3-205ENST00000506924 GPSM3Q9Y4H4 160 aa12.64□□□□□ -0.39
CLCN3-205ENST00000506924 MYBBP1AQ9BQG0 1328 aaKnown RBP12.63□□□□□ -0.39
CLCN3-205ENST00000506924 TOGARAM1Q9Y4F4 1720 aa12.63□□□□□ -0.39
CLCN3-205ENST00000506924 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
CLCN3-205ENST00000506924 C1orf141Q5JVX7 400 aa12.63□□□□□ -0.39
CLCN3-205ENST00000506924 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
CLCN3-205ENST00000506924 PLSCR1O15162 318 aa12.62□□□□□ -0.39
CLCN3-205ENST00000506924 PRKAR2BP31323 418 aa12.62□□□□□ -0.39
CLCN3-205ENST00000506924 KCNQ4P56696 695 aa12.62□□□□□ -0.39
CLCN3-205ENST00000506924 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
CLCN3-205ENST00000506924 PDXDC2PQ6P474 469 aa12.62□□□□□ -0.39
CLCN3-205ENST00000506924 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
CLCN3-205ENST00000506924 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
CLCN3-205ENST00000506924 GPR37L1O60883 481 aa12.61□□□□□ -0.39
CLCN3-205ENST00000506924 PLA2G2CQ5R387 149 aa12.61□□□□□ -0.39
CLCN3-205ENST00000506924 PIGBQ92521 554 aa12.61□□□□□ -0.39
CLCN3-205ENST00000506924 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
CLCN3-205ENST00000506924 ITGB4P16144 1822 aa12.6□□□□□ -0.39
CLCN3-205ENST00000506924 RGS20O76081 388 aa12.6□□□□□ -0.39
CLCN3-205ENST00000506924 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
CLCN3-205ENST00000506924 RREB1Q92766 1687 aa12.59□□□□□ -0.39
CLCN3-205ENST00000506924 WNT7BP56706 349 aa12.59□□□□□ -0.39
CLCN3-205ENST00000506924 R3HDM1Q15032 1099 aaKnown RBP12.59□□□□□ -0.39
CLCN3-205ENST00000506924 WASHC4Q2M389 1173 aa12.59□□□□□ -0.39
CLCN3-205ENST00000506924 POM121Q96HA1 1249 aa12.59□□□□□ -0.39
CLCN3-205ENST00000506924 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
CLCN3-205ENST00000506924 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
CLCN3-205ENST00000506924 TMOD3Q9NYL9 352 aa12.59□□□□□ -0.39
CLCN3-205ENST00000506924 KDM6AO15550 1401 aaPredicted RBP12.59□□□□□ -0.39
CLCN3-205ENST00000506924 NUP188Q5SRE5 1749 aa12.59□□□□□ -0.39
CLCN3-205ENST00000506924 CD2BP2O95400 341 aaKnown RBP12.58□□□□□ -0.4
CLCN3-205ENST00000506924 HSP90AB1P08238 724 aaKnown RBP12.58□□□□□ -0.4
CLCN3-205ENST00000506924 TRIM32Q13049 653 aa12.58□□□□□ -0.4
CLCN3-205ENST00000506924 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
CLCN3-205ENST00000506924 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
CLCN3-205ENST00000506924 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
CLCN3-205ENST00000506924 ANP32CO43423 234 aa12.57□□□□□ -0.4
CLCN3-205ENST00000506924 CABP4P57796 275 aa12.57□□□□□ -0.4
CLCN3-205ENST00000506924 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
CLCN3-205ENST00000506924 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms