RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GNB5O14775 395 aa6.84□□□□□ -1.31
HMGB1P29-201ENST00000505659 XYLBO75191 536 aa6.84□□□□□ -1.31
HMGB1P29-201ENST00000505659 ITGB2P05107 769 aa6.84□□□□□ -1.31
HMGB1P29-201ENST00000505659 ZAP70P43403 619 aa6.84□□□□□ -1.31
HMGB1P29-201ENST00000505659 MLLT1Q03111 559 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P29-201ENST00000505659 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
HMGB1P29-201ENST00000505659 ZBTB42B2RXF5 422 aa6.83□□□□□ -1.32
HMGB1P29-201ENST00000505659 RARAP10276 462 aa6.83□□□□□ -1.32
HMGB1P29-201ENST00000505659 COL9A3Q14050 684 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P29-201ENST00000505659 MICALL1Q8N3F8 863 aa6.83□□□□□ -1.32
HMGB1P29-201ENST00000505659 GPR152Q8TDT2 470 aa6.83□□□□□ -1.32
HMGB1P29-201ENST00000505659 GTF3C2Q8WUA4 911 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P29-201ENST00000505659 KRBA1A5PL33 1030 aa6.82□□□□□ -1.32
HMGB1P29-201ENST00000505659 C20orf204Q6ZNR8 217 aa6.82□□□□□ -1.32
HMGB1P29-201ENST00000505659 DHX32Q7L7V1 743 aaKnown RBP6.82□□□□□ -1.32
HMGB1P29-201ENST00000505659 RETREG2Q8NC44 543 aa6.82□□□□□ -1.32
HMGB1P29-201ENST00000505659 HELQQ8TDG4 1101 aa6.82□□□□□ -1.32
HMGB1P29-201ENST00000505659 NUDT8Q8WV74 236 aa6.82□□□□□ -1.32
HMGB1P29-201ENST00000505659 MAP3K6O95382 1288 aa6.81□□□□□ -1.32
HMGB1P29-201ENST00000505659 EGFRP00533 1210 aa6.81□□□□□ -1.32
HMGB1P29-201ENST00000505659 CPB1P15086 417 aa6.81□□□□□ -1.32
HMGB1P29-201ENST00000505659 MPSTP25325 297 aa6.81□□□□□ -1.32
HMGB1P29-201ENST00000505659 PLAURQ03405 335 aa6.81□□□□□ -1.32
HMGB1P29-201ENST00000505659 GPAT2Q6NUI2 795 aa6.81□□□□□ -1.32
HMGB1P29-201ENST00000505659 HFE2Q6ZVN8 426 aa6.81□□□□□ -1.32
HMGB1P29-201ENST00000505659 PLVAPQ9BX97 442 aa6.81□□□□□ -1.32
HMGB1P29-201ENST00000505659 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 MMP20O60882 483 aa6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 ZNF211Q13398 564 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 PLA2G4EQ3MJ16 856 aa6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 PSAPL1Q6NUJ1 521 aa6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 FAM35AQ86V20 835 aa6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 ABTB2Q8N961 1025 aa6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 EFCC1Q9HA90 598 aa6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 ANO2Q9NQ90 1003 aa6.8□□□□□ -1.32
HMGB1P29-201ENST00000505659 UBAP1LF5GYI3 381 aa6.79□□□□□ -1.32
HMGB1P29-201ENST00000505659 NID1P14543 1247 aa6.79□□□□□ -1.32
HMGB1P29-201ENST00000505659 TRPM4Q8TD43 1214 aa6.79□□□□□ -1.32
HMGB1P29-201ENST00000505659 PIK3R5Q8WYR1 880 aa6.79□□□□□ -1.32
HMGB1P29-201ENST00000505659 NSUN5Q96P11 429 aaKnown RBP6.79□□□□□ -1.32
HMGB1P29-201ENST00000505659 JPH1Q9HDC5 661 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P29-201ENST00000505659 USTQ9Y2C2 406 aa6.79□□□□□ -1.32
HMGB1P29-201ENST00000505659 ABL1P00519 1130 aa6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 EIF1AXP47813 144 aaKnown RBP6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 GPLD1P80108 840 aa6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 PERM1Q5SV97 790 aa6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 EDEM1Q92611 657 aa6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 NUDT16Q96DE0 195 aaKnown RBP6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 LPIN3Q9BQK8 851 aa6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 C11orf16Q9NQ32 467 aa6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 PRDM6Q9NQX0 595 aa6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 TLR7Q9NYK1 1049 aaKnown RBP6.78□□□□□ -1.32
HMGB1P29-201ENST00000505659 A6NHS1 94 aa6.77□□□□□ -1.33
HMGB1P29-201ENST00000505659 J3QW42 95 aa6.77□□□□□ -1.33
HMGB1P29-201ENST00000505659 LILRB5O75023 590 aa6.77□□□□□ -1.33
HMGB1P29-201ENST00000505659 DNM1Q05193 864 aaKnown RBP6.77□□□□□ -1.33
HMGB1P29-201ENST00000505659 NLRP13Q86W25 1043 aa6.77□□□□□ -1.33
HMGB1P29-201ENST00000505659 NOP53Q9NZM5 478 aaKnown RBP6.77□□□□□ -1.33
HMGB1P29-201ENST00000505659 PIK3R2O00459 728 aa6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 PSAPP07602 524 aa6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 EIF2AK2P19525 551 aaKnown RBP6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 CHRNA4P43681 627 aa6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 SERPINB4P48594 390 aa6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 AFF1P51825 1210 aaKnown RBP6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 NRLP54845 237 aa6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 NOM1Q5C9Z4 860 aaKnown RBP6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 COL13A1Q5TAT6 717 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 FAM13BQ9NYF5 915 aa6.76□□□□□ -1.33
HMGB1P29-201ENST00000505659 RGS9O75916 674 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 PDGFAP04085 211 aa6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 CYP2E1P05181 493 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 GRIK5Q16478 980 aa6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 SPOCK3Q9BQ16 436 aa6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 SMG9Q9H0W8 520 aaKnown RBP6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 GGNBP2Q9H3C7 697 aa6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 TMEM63CQ9P1W3 806 aa6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P29-201ENST00000505659 C1QTNF9BB2RNN3 333 aa6.74□□□□□ -1.33
HMGB1P29-201ENST00000505659 PROCP04070 461 aa6.74□□□□□ -1.33
HMGB1P29-201ENST00000505659 ELMSAN1Q6PJG2 1045 aa6.74□□□□□ -1.33
HMGB1P29-201ENST00000505659 CD163Q86VB7 1156 aa6.74□□□□□ -1.33
HMGB1P29-201ENST00000505659 POLIQ9UNA4 740 aa6.74□□□□□ -1.33
HMGB1P29-201ENST00000505659 LOC102724428A0A0B4J2F2 783 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 NPR3P17342 541 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 SIK1P57059 783 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 PCSK7Q16549 785 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 TRAPPC3LQ5T215 181 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 DMRTC2Q8IXT2 367 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 OR13H1Q8NG92 308 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 PLD4Q96BZ4 506 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 ELP3Q9H9T3 547 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 CNTN3Q9P232 1028 aa6.73□□□□□ -1.33
HMGB1P29-201ENST00000505659 A0A0A0MRY4 1105 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 FZD6O60353 706 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 SPATA31C1P0DKV0 1188 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 HOXD8P13378 290 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 SOX18P35713 384 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 ATP11AP98196 1134 aa6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 FKBP4Q02790 459 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGB1P29-201ENST00000505659 GRIK4Q16099 956 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms