RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 COL4A5P29400 1685 aa5.98□□□□□ -1.45
CPNE4-204ENST00000505331 AFDNP55196 1824 aaKnown RBP5.97□□□□□ -1.45
CPNE4-204ENST00000505331 SLX4Q8IY92 1834 aa5.97□□□□□ -1.45
CPNE4-204ENST00000505331 COL11A2P13942 1736 aaPredicted RBP5.97□□□□□ -1.45
CPNE4-204ENST00000505331 EIF5P55010 431 aaKnown RBP5.97□□□□□ -1.45
CPNE4-204ENST00000505331 TNIP1Q15025 636 aa5.97□□□□□ -1.45
CPNE4-204ENST00000505331 SULF1Q8IWU6 871 aa5.97□□□□□ -1.45
CPNE4-204ENST00000505331 NFATC2IPQ8NCF5 419 aa5.97□□□□□ -1.45
CPNE4-204ENST00000505331 RBBP6Q7Z6E9 1792 aaKnown RBP5.97□□□□□ -1.45
CPNE4-204ENST00000505331 ST20-MTHFSA0A0A6YYL1 179 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 PPIP5K2O43314 1243 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 CANXP27824 592 aaKnown RBP5.96□□□□□ -1.46
CPNE4-204ENST00000505331 MTHFSP49914 203 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 ARHGEF6Q15052 776 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 FAM109BQ6ICB4 259 aaPredicted RBP5.96□□□□□ -1.46
CPNE4-204ENST00000505331 NBPF5PQ86XG9 351 aaPredicted RBP5.96□□□□□ -1.46
CPNE4-204ENST00000505331 MICALL2Q8IY33 904 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 NKX2-3Q8TAU0 364 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 CD99L2Q8TCZ2 262 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 CDCA5Q96FF9 252 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 GUCD1Q96NT3 240 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 DCBLD2Q96PD2 775 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 ZNF609O15014 1411 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 MYH14Q7Z406 1995 aaKnown RBP5.96□□□□□ -1.46
CPNE4-204ENST00000505331 LAMA3Q16787 3333 aa5.96□□□□□ -1.46
CPNE4-204ENST00000505331 RGPD2P0DJD1 1756 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 EVI5O60447 810 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 BCAMP50895 628 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 INHBEP58166 350 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 TJAP1Q5JTD0 557 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 UBE2Q1Q7Z7E8 422 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 DPF2Q92785 391 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 EYA1Q99502 592 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 P2RX7Q99572 595 aaKnown RBP5.95□□□□□ -1.46
CPNE4-204ENST00000505331 GDF15Q99988 308 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 HCN4Q9Y3Q4 1203 aa5.95□□□□□ -1.46
CPNE4-204ENST00000505331 ANKRD31Q8N7Z5 1873 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 RAD17O75943 681 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 STARD3NLO95772 234 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 MYCP01106 439 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-204ENST00000505331 AOC3Q16853 763 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 PLEKHO1Q53GL0 409 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-204ENST00000505331 TPTE2Q6XPS3 522 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 ALYREFQ86V81 257 aaKnown RBP5.94□□□□□ -1.46
CPNE4-204ENST00000505331 TDHQ8IZJ6 230 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 VSIG10Q8N0Z9 540 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 SUPT20HQ8NEM7 779 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 MAFAQ8NHW3 353 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-204ENST00000505331 SHISA4Q96DD7 197 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 TBC1D2BQ9UPU7 963 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 PTCH2Q9Y6C5 1203 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 IRS2Q9Y4H2 1338 aa5.94□□□□□ -1.46
CPNE4-204ENST00000505331 RAB3GAP2Q9H2M9 1393 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 SHTN1A0MZ66 631 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 UBE2Q2LH0YL09 131 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 POTEB2H3BUK9 544 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 CAMTA2O94983 1202 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 SP3Q02447 781 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 MKRN3Q13064 507 aaKnown RBP5.93□□□□□ -1.46
CPNE4-204ENST00000505331 TCIRG1Q13488 830 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 TBC1D10BQ4KMP7 808 aaPredicted RBP5.93□□□□□ -1.46
CPNE4-204ENST00000505331 AMOTQ4VCS5 1084 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 ZNF530Q6P9A1 599 aaPredicted RBP5.93□□□□□ -1.46
CPNE4-204ENST00000505331 NPM2Q86SE8 214 aaKnown RBP5.93□□□□□ -1.46
CPNE4-204ENST00000505331 IFNL1Q8IU54 200 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 PUS7Q96PZ0 661 aaKnown RBP5.93□□□□□ -1.46
CPNE4-204ENST00000505331 C1QTNF1Q9BXJ1 281 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 ARFGEF2Q9Y6D5 1785 aa5.93□□□□□ -1.46
CPNE4-204ENST00000505331 CENPFP49454 3210 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 AKAP11Q9UKA4 1901 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 TJP1Q07157 1748 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 PRAMEF22A3QJZ6 481 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 MANSC4A6NHS7 340 aaPredicted RBP5.92□□□□□ -1.46
CPNE4-204ENST00000505331 SPDYE4A6NLX3 237 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 FYB1O15117 783 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 GALR2O43603 387 aaPredicted RBP5.92□□□□□ -1.46
CPNE4-204ENST00000505331 EGFRP00533 1210 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 GJA8P48165 433 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 CRY2Q49AN0 593 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 C1orf141Q5JVX7 400 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 PPARGC1BQ86YN6 1023 aaKnown RBP5.92□□□□□ -1.46
CPNE4-204ENST00000505331 TMX4Q9H1E5 349 aaPredicted RBP5.92□□□□□ -1.46
CPNE4-204ENST00000505331 GGNBP2Q9H3C7 697 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 GGA3Q9NZ52 723 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 MUC3AQ02505 3323 aa5.92□□□□□ -1.46
CPNE4-204ENST00000505331 RPS12P25398 132 aaKnown RBP5.91□□□□□ -1.46
CPNE4-204ENST00000505331 IL6STP40189 918 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-204ENST00000505331 TRIM26Q12899 539 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-204ENST00000505331 RBM26Q5T8P6 1007 aaKnown RBP5.91□□□□□ -1.46
CPNE4-204ENST00000505331 CLEC4GQ6UXB4 293 aa5.91□□□□□ -1.46
CPNE4-204ENST00000505331 MOB2Q70IA6 237 aa5.91□□□□□ -1.46
CPNE4-204ENST00000505331 SH3TC2Q8TF17 1288 aa5.91□□□□□ -1.46
CPNE4-204ENST00000505331 RTFDC1Q9BY42 306 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-204ENST00000505331 PCGF6Q9BYE7 350 aa5.91□□□□□ -1.46
CPNE4-204ENST00000505331 ZNF330Q9Y3S2 320 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-204ENST00000505331 EMILIN1Q9Y6C2 1016 aa5.91□□□□□ -1.46
CPNE4-204ENST00000505331 KIF7Q2M1P5 1343 aa5.91□□□□□ -1.46
CPNE4-204ENST00000505331 PPM1GO15355 546 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-204ENST00000505331 FARP2O94887 1054 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-204ENST00000505331 GJB1P08034 283 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms