RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 NYXQ9GZU5 481 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 TAOK3Q9H2K8 898 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 RMND1Q9NWS8 449 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 ASXL1Q8IXJ9 1541 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 C8orf37Q96NL8 207 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 COMMD10Q9Y6G5 202 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 CCDC174Q6PII3 467 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 RIMS2Q9UQ26 1411 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 UBA7P41226 1012 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 IL27Q8NEV9 243 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 CNNM2Q9H8M5 875 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 KLF18A0A0U1RQI7 1052 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 PRPF4BQ13523 1007 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 CLEC11AQ9Y240 323 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 MAGEB6P1A0A0J9YX57 407 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 GOLGA6L10A0A0M3HER8 536 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 GSDMDP57764 484 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 AKAP4Q5JQC9 854 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 ZSCAN30Q86W11 494 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 TBC1D5Q92609 795 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 SMARCC1Q92922 1105 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 TRMT1Q9NXH9 659 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 URB2Q14146 1524 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 ESPNB1AK53 854 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 UBE4AQ14139 1066 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 RHPN1Q8TCX5 695 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 NIP7Q9Y221 180 aaKnown RBP eCLIP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 STAT6P42226 847 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 NOP2P46087 812 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 LMAN1P49257 510 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 ATP2B3Q16720 1220 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 RRAGBQ5VZM2 374 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 TRIM47Q96LD4 638 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 NAA15Q9BXJ9 866 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 EIF2AK4Q9P2K8 1649 aaKnown RBP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 RTN1Q16799 776 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 NAA16Q6N069 864 aaPredicted RBP8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 GDPD2Q9HCC8 539 aa8.23□□□□□ -1.09
SYNPO2-205ENST00000504178 POTEB2H3BUK9 544 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 NEMFO60524 1076 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 ZFYP08048 801 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 SLC39A6Q13433 755 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 GIGYF2Q6Y7W6 1299 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 FERMT1Q9BQL6 677 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 STX8Q9UNK0 236 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 IQSEC3Q9UPP2 1182 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 PARP3Q9Y6F1 533 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 RPRD2Q5VT52 1461 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 UBAP1LF5GYI3 381 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 ZBTB43O43298 467 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 NF2P35240 595 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 CCDC102BQ68D86 513 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 ESR2Q92731 530 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 TBC1D2Q9BYX2 928 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 USP25Q9UHP3 1055 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 WDR7Q9Y4E6 1490 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 BMP2KLQ5H9B9 411 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 PABPN1LA6NDY0 278 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 TOM1O60784 492 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 GRM1Q13255 1194 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 SMC1AQ14683 1233 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 SMARCC2Q8TAQ2 1214 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 ALG1Q9BT22 464 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 ZSCAN16Q9H4T2 348 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 UHRF1BP1LA0JNW5 1464 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 ABCC1P33527 1531 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 COPS6Q7L5N1 327 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 SYNCQ9H7C4 482 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 CGNQ9P2M7 1197 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 RTL9Q8NET4 1388 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 BIVM-ERCC5R4GMW8 1640 aa8.22□□□□□ -1.09
SYNPO2-205ENST00000504178 CALM1P0DP23 149 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 CALM2P0DP24 149 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 CALM3P0DP25 149 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 NUCB1Q02818 461 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 MCMDC2Q4G0Z9 681 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 DZIP3Q86Y13 1208 aaKnown RBP8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 TSNARE1Q96NA8 513 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 CCDC172P0C7W6 258 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 FBLN1P23142 703 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 NAPAP54920 295 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 PLS1Q14651 629 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 DDB1Q16531 1140 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 IFI16Q16666 785 aaKnown RBP8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 SIRT1Q96EB6 747 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 PSMD1Q99460 953 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 VEZTQ9HBM0 779 aa8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.09
SYNPO2-205ENST00000504178 AFMP43652 599 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 HLTFQ14527 1009 aaKnown RBP eCLIP8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 SYCP2Q9BX26 1530 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 TRAF1Q13077 416 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 Q6ZUG5 572 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 TMTC2Q8N394 836 aa8.21□□□□□ -1.1
SYNPO2-205ENST00000504178 HOMER2Q9NSB8 354 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms