RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 KIAA2012Q0VF49 1180 aa21.06■□□□□ 0.96
PDLIM7-210ENST00000503827 C3orf67Q6ZVT6 689 aa21.06■□□□□ 0.96
PDLIM7-210ENST00000503827 ZNF34Q8IZ26 560 aa21.06■□□□□ 0.96
PDLIM7-210ENST00000503827 CCDC102AQ96A19 550 aa21.06■□□□□ 0.96
PDLIM7-210ENST00000503827 MYL6BP14649 208 aa21.05■□□□□ 0.96
PDLIM7-210ENST00000503827 MPNDQ8N594 471 aa21.05■□□□□ 0.96
PDLIM7-210ENST00000503827 MIS18AQ9NYP9 233 aa21.05■□□□□ 0.96
PDLIM7-210ENST00000503827 ABCC4O15439 1325 aa21.04■□□□□ 0.96
PDLIM7-210ENST00000503827 FAM155AB1AL88 458 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-210ENST00000503827 KIF23Q02241 960 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-210ENST00000503827 PARP10Q53GL7 1025 aa21.04■□□□□ 0.96
PDLIM7-210ENST00000503827 GIGYF2Q6Y7W6 1299 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-210ENST00000503827 SP8Q8IXZ3 490 aa21.04■□□□□ 0.96
PDLIM7-210ENST00000503827 C2orf69Q8N8R5 385 aa21.04■□□□□ 0.96
PDLIM7-210ENST00000503827 KDM3BQ7LBC6 1761 aa21.04■□□□□ 0.96
PDLIM7-210ENST00000503827 LAMB2P55268 1798 aa21.03■□□□□ 0.96
PDLIM7-210ENST00000503827 ANKRD36CQ5JPF3 1778 aa21.03■□□□□ 0.96
PDLIM7-210ENST00000503827 TRPA1O75762 1119 aa21.03■□□□□ 0.96
PDLIM7-210ENST00000503827 BBOX1O75936 387 aa21.03■□□□□ 0.96
PDLIM7-210ENST00000503827 U2AF1L5P0DN76 240 aaPredicted RBP21.03■□□□□ 0.96
PDLIM7-210ENST00000503827 U2AF1Q01081 240 aaKnown RBP eCLIP21.03■□□□□ 0.964e-6■■□□□ 12.1
PDLIM7-210ENST00000503827 MICALL2Q8IY33 904 aa21.03■□□□□ 0.96
PDLIM7-210ENST00000503827 GBA2Q9HCG7 927 aaPredicted RBP21.03■□□□□ 0.96
PDLIM7-210ENST00000503827 RNF186Q9NXI6 227 aa21.03■□□□□ 0.96
PDLIM7-210ENST00000503827 ZNF157P51786 506 aaPredicted RBP21.02■□□□□ 0.96
PDLIM7-210ENST00000503827 SLC10A5Q5PT55 438 aa21.02■□□□□ 0.96
PDLIM7-210ENST00000503827 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-210ENST00000503827 PCGF6Q9BYE7 350 aa21.02■□□□□ 0.96
PDLIM7-210ENST00000503827 SHTN1A0MZ66 631 aa21.01■□□□□ 0.95
PDLIM7-210ENST00000503827 DLK2Q6UY11 383 aa21.01■□□□□ 0.95
PDLIM7-210ENST00000503827 KRT26Q7Z3Y9 468 aa21.01■□□□□ 0.95
PDLIM7-210ENST00000503827 CTU1Q7Z7A3 348 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-210ENST00000503827 DLG5Q8TDM6 1919 aa21■□□□□ 0.95
PDLIM7-210ENST00000503827 DPF2Q92785 391 aa21■□□□□ 0.95
PDLIM7-210ENST00000503827 UTP14AQ9BVJ6 771 aaKnown RBP21■□□□□ 0.95
PDLIM7-210ENST00000503827 YDJCA8MPS7 323 aa20.99■□□□□ 0.95
PDLIM7-210ENST00000503827 SAMD7Q7Z3H4 446 aa20.99■□□□□ 0.95
PDLIM7-210ENST00000503827 DCPSQ96C86 337 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-210ENST00000503827 ZBTB12Q9Y330 459 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-210ENST00000503827 TAF1P21675 1872 aa20.98■□□□□ 0.95
PDLIM7-210ENST00000503827 EIF4A1P60842 406 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-210ENST00000503827 TBC1D10BQ4KMP7 808 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-210ENST00000503827 DDX46Q7L014 1031 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-210ENST00000503827 REM2Q8IYK8 340 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-210ENST00000503827 SLC10A3P09131 477 aa20.96■□□□□ 0.95
PDLIM7-210ENST00000503827 CSRNP1Q96S65 589 aa20.96■□□□□ 0.95
PDLIM7-210ENST00000503827 ERBB4Q15303 1308 aa20.96■□□□□ 0.95
PDLIM7-210ENST00000503827 ADM5C9JUS6 153 aa20.95■□□□□ 0.94
PDLIM7-210ENST00000503827 GRAPQ13588 217 aa20.95■□□□□ 0.94
PDLIM7-210ENST00000503827 GRAPLQ8TC17 118 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-210ENST00000503827 HPS5Q9UPZ3 1129 aa20.95■□□□□ 0.94
PDLIM7-210ENST00000503827 DUOX1Q9NRD9 1551 aa20.94■□□□□ 0.94
PDLIM7-210ENST00000503827 PSMD14O00487 310 aa20.94■□□□□ 0.94
PDLIM7-210ENST00000503827 PKN2Q16513 984 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-210ENST00000503827 RBM26Q5T8P6 1007 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-210ENST00000503827 TMC4Q7Z404 712 aa20.94■□□□□ 0.94
PDLIM7-210ENST00000503827 LRRC37AA6NMS7 1700 aa20.94■□□□□ 0.94
PDLIM7-210ENST00000503827 DDX60Q8IY21 1712 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-210ENST00000503827 NEFMP07197 916 aa20.93■□□□□ 0.94
PDLIM7-210ENST00000503827 RPS12P25398 132 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-210ENST00000503827 WASHC4Q2M389 1173 aa20.93■□□□□ 0.94
PDLIM7-210ENST00000503827 EGFRP00533 1210 aa20.92■□□□□ 0.94
PDLIM7-210ENST00000503827 HCLS1P14317 486 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-210ENST00000503827 SULF1Q8IWU6 871 aa20.92■□□□□ 0.94
PDLIM7-210ENST00000503827 GCC1Q96CN9 775 aa20.92■□□□□ 0.94
PDLIM7-210ENST00000503827 DBNDD1Q9H9R9 158 aa20.92■□□□□ 0.94
PDLIM7-210ENST00000503827 HDAC9Q9UKV0 1011 aa20.92■□□□□ 0.94
PDLIM7-210ENST00000503827 HSP90AB3PQ58FF7 597 aa20.9■□□□□ 0.94
PDLIM7-210ENST00000503827 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
PDLIM7-210ENST00000503827 KIF4BQ2VIQ3 1234 aa20.89■□□□□ 0.93
PDLIM7-210ENST00000503827 GGA3Q9NZ52 723 aa20.89■□□□□ 0.93
PDLIM7-210ENST00000503827 NSFL1CQ9UNZ2 370 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-210ENST00000503827 SH3TC1Q8TE82 1336 aa20.88■□□□□ 0.93
PDLIM7-210ENST00000503827 RIMBP2O15034 1052 aa20.88■□□□□ 0.93
PDLIM7-210ENST00000503827 NLRP10Q86W26 655 aa20.88■□□□□ 0.93
PDLIM7-210ENST00000503827 RASAL3Q86YV0 1011 aa20.88■□□□□ 0.93
PDLIM7-210ENST00000503827 CDCA5Q96FF9 252 aa20.88■□□□□ 0.93
PDLIM7-210ENST00000503827 TRMT112Q9UI30 125 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-210ENST00000503827 C6orf229H3BNL8 230 aa20.87■□□□□ 0.93
PDLIM7-210ENST00000503827 PPP2R1AP30153 589 aa20.87■□□□□ 0.93
PDLIM7-210ENST00000503827 LRP10Q7Z4F1 713 aa20.87■□□□□ 0.93
PDLIM7-210ENST00000503827 ECE2O60344 883 aa20.86■□□□□ 0.93
PDLIM7-210ENST00000503827 EIF2S2P20042 333 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-210ENST00000503827 PDIA6Q15084 440 aa20.86■□□□□ 0.93
PDLIM7-210ENST00000503827 EYA3Q99504 573 aa20.86■□□□□ 0.93
PDLIM7-210ENST00000503827 PAPPA2Q9BXP8 1791 aa20.85■□□□□ 0.93
PDLIM7-210ENST00000503827 FKBP1BP68106 108 aa20.85■□□□□ 0.93
PDLIM7-210ENST00000503827 ZNF296Q8WUU4 475 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-210ENST00000503827 KCNQ5Q9NR82 932 aa20.85■□□□□ 0.93
PDLIM7-210ENST00000503827 RTL9Q8NET4 1388 aa20.85■□□□□ 0.93
PDLIM7-210ENST00000503827 DOK7Q18PE1 504 aa20.84■□□□□ 0.93
PDLIM7-210ENST00000503827 SCN9AQ15858 1988 aa20.83■□□□□ 0.93
PDLIM7-210ENST00000503827 TBC1D8O95759 1140 aa20.83■□□□□ 0.93
PDLIM7-210ENST00000503827 ANXA1P04083 346 aa20.83■□□□□ 0.93
PDLIM7-210ENST00000503827 AIMP1Q12904 312 aaKnown RBP20.83■□□□□ 0.93
PDLIM7-210ENST00000503827 TCIRG1Q13488 830 aa20.83■□□□□ 0.93
PDLIM7-210ENST00000503827 PROSER3Q2NL68 480 aa20.83■□□□□ 0.93
PDLIM7-210ENST00000503827 COPS6Q7L5N1 327 aa20.83■□□□□ 0.93
PDLIM7-210ENST00000503827 POLLQ9UGP5 575 aa20.83■□□□□ 0.93
PDLIM7-210ENST00000503827 ASTN2O75129 1339 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms