RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TRPM4Q8TD43 1214 aa15.45■□□□□ 0.06
CDK9-205ENST00000498339 VPS33BQ9H267 617 aa15.45■□□□□ 0.06
CDK9-205ENST00000498339 PARP10Q53GL7 1025 aa15.44■□□□□ 0.06
CDK9-205ENST00000498339 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
CDK9-205ENST00000498339 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
CDK9-205ENST00000498339 PDE4DIPQ5VU43 2346 aa15.43■□□□□ 0.06
CDK9-205ENST00000498339 H7C1D1 291 aa15.43■□□□□ 0.06
CDK9-205ENST00000498339 MPNDQ8N594 471 aa15.43■□□□□ 0.06
CDK9-205ENST00000498339 ZC3H15Q8WU90 426 aaKnown RBP15.43■□□□□ 0.06
CDK9-205ENST00000498339 UTP14AQ9BVJ6 771 aaKnown RBP15.43■□□□□ 0.06
CDK9-205ENST00000498339 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
CDK9-205ENST00000498339 HIRAP54198 1017 aaPredicted RBP15.42■□□□□ 0.06
CDK9-205ENST00000498339 SOX10P56693 466 aa15.42■□□□□ 0.06
CDK9-205ENST00000498339 EIF4A1P60842 406 aaKnown RBP15.42■□□□□ 0.06
CDK9-205ENST00000498339 KIAA2012Q0VF49 1180 aa15.42■□□□□ 0.06
CDK9-205ENST00000498339 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
CDK9-205ENST00000498339 MICALL2Q8IY33 904 aa15.42■□□□□ 0.06
CDK9-205ENST00000498339 ZIC5Q96T25 663 aa15.42■□□□□ 0.06
CDK9-205ENST00000498339 CNOT7Q9UIV1 285 aaKnown RBP15.42■□□□□ 0.06
CDK9-205ENST00000498339 LRRC37AA6NMS7 1700 aa15.41■□□□□ 0.06
CDK9-205ENST00000498339 SHTN1A0MZ66 631 aa15.41■□□□□ 0.06
CDK9-205ENST00000498339 PPP2R1AP30153 589 aa15.41■□□□□ 0.06
CDK9-205ENST00000498339 THUMPD2Q9BTF0 503 aaKnown RBP15.41■□□□□ 0.06
CDK9-205ENST00000498339 RTFDC1Q9BY42 306 aaPredicted RBP15.41■□□□□ 0.06
CDK9-205ENST00000498339 PGAP2Q9UHJ9 254 aa15.41■□□□□ 0.06
CDK9-205ENST00000498339 DDX46Q7L014 1031 aaKnown RBP15.4■□□□□ 0.06
CDK9-205ENST00000498339 DUOX1Q9NRD9 1551 aa15.4■□□□□ 0.06
CDK9-205ENST00000498339 ERBB4Q15303 1308 aa15.4■□□□□ 0.06
CDK9-205ENST00000498339 BBOX1O75936 387 aa15.39■□□□□ 0.05
CDK9-205ENST00000498339 HCLS1P14317 486 aaPredicted RBP15.39■□□□□ 0.05
CDK9-205ENST00000498339 RGMBQ6NW40 437 aa15.39■□□□□ 0.05
CDK9-205ENST00000498339 KRT26Q7Z3Y9 468 aa15.39■□□□□ 0.05
CDK9-205ENST00000498339 SP8Q8IXZ3 490 aa15.39■□□□□ 0.05
CDK9-205ENST00000498339 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
CDK9-205ENST00000498339 YDJCA8MPS7 323 aa15.38■□□□□ 0.05
CDK9-205ENST00000498339 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
CDK9-205ENST00000498339 ZNF157P51786 506 aaPredicted RBP15.38■□□□□ 0.05
CDK9-205ENST00000498339 GRAPQ13588 217 aa15.38■□□□□ 0.05
CDK9-205ENST00000498339 TBC1D10BQ4KMP7 808 aaPredicted RBP15.38■□□□□ 0.05
CDK9-205ENST00000498339 DLK2Q6UY11 383 aa15.38■□□□□ 0.05
CDK9-205ENST00000498339 SAMD7Q7Z3H4 446 aa15.38■□□□□ 0.05
CDK9-205ENST00000498339 C2orf69Q8N8R5 385 aa15.38■□□□□ 0.05
CDK9-205ENST00000498339 GRAPLQ8TC17 118 aaPredicted RBP15.38■□□□□ 0.05
CDK9-205ENST00000498339 GBA2Q9HCG7 927 aaPredicted RBP15.38■□□□□ 0.05
CDK9-205ENST00000498339 ADM5C9JUS6 153 aa15.37■□□□□ 0.05
CDK9-205ENST00000498339 TRPA1O75762 1119 aa15.37■□□□□ 0.05
CDK9-205ENST00000498339 ANXA1P04083 346 aa15.37■□□□□ 0.05
CDK9-205ENST00000498339 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
CDK9-205ENST00000498339 DCPSQ96C86 337 aaKnown RBP15.37■□□□□ 0.05
CDK9-205ENST00000498339 SAGE1Q9NXZ1 904 aa15.37■□□□□ 0.05
CDK9-205ENST00000498339 TSPYL4Q9UJ04 414 aa15.37■□□□□ 0.05
CDK9-205ENST00000498339 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
CDK9-205ENST00000498339 PSMD14O00487 310 aa15.36■□□□□ 0.05
CDK9-205ENST00000498339 KIF23Q02241 960 aaPredicted RBP15.36■□□□□ 0.05
CDK9-205ENST00000498339 HSP90AB3PQ58FF7 597 aa15.36■□□□□ 0.05
CDK9-205ENST00000498339 SLC10A5Q5PT55 438 aa15.36■□□□□ 0.05
CDK9-205ENST00000498339 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
CDK9-205ENST00000498339 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
CDK9-205ENST00000498339 DBNDD1Q9H9R9 158 aa15.36■□□□□ 0.05
CDK9-205ENST00000498339 TRMT112Q9UI30 125 aaKnown RBP15.36■□□□□ 0.05
CDK9-205ENST00000498339 SH3TC1Q8TE82 1336 aa15.36■□□□□ 0.05
CDK9-205ENST00000498339 FAM155AB1AL88 458 aaPredicted RBP15.35■□□□□ 0.05
CDK9-205ENST00000498339 RIMBP2O15034 1052 aa15.35■□□□□ 0.05
CDK9-205ENST00000498339 AIMP1Q12904 312 aaKnown RBP15.35■□□□□ 0.05
CDK9-205ENST00000498339 NFE2L2Q16236 605 aa15.35■□□□□ 0.05
CDK9-205ENST00000498339 WASHC4Q2M389 1173 aa15.35■□□□□ 0.05
CDK9-205ENST00000498339 RNF186Q9NXI6 227 aa15.35■□□□□ 0.05
CDK9-205ENST00000498339 C6orf229H3BNL8 230 aa15.34■□□□□ 0.05
CDK9-205ENST00000498339 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
CDK9-205ENST00000498339 TMC4Q7Z404 712 aa15.34■□□□□ 0.05
CDK9-205ENST00000498339 NLRP10Q86W26 655 aa15.34■□□□□ 0.05
CDK9-205ENST00000498339 NECTIN2Q92692 538 aa15.34■□□□□ 0.05
CDK9-205ENST00000498339 NSFL1CQ9UNZ2 370 aaKnown RBP15.34■□□□□ 0.05
CDK9-205ENST00000498339 EGFRP00533 1210 aa15.33■□□□□ 0.04
CDK9-205ENST00000498339 KIF4BQ2VIQ3 1234 aa15.33■□□□□ 0.04
CDK9-205ENST00000498339 PRPF38BQ5VTL8 546 aaKnown RBP15.33■□□□□ 0.04
CDK9-205ENST00000498339 SULF1Q8IWU6 871 aa15.33■□□□□ 0.04
CDK9-205ENST00000498339 DPF2Q92785 391 aa15.33■□□□□ 0.04
CDK9-205ENST00000498339 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
CDK9-205ENST00000498339 SCN9AQ15858 1988 aa15.33■□□□□ 0.04
CDK9-205ENST00000498339 ECE2O60344 883 aa15.32■□□□□ 0.04
CDK9-205ENST00000498339 SLC10A3P09131 477 aa15.32■□□□□ 0.04
CDK9-205ENST00000498339 RPS12P25398 132 aaKnown RBP15.32■□□□□ 0.04
CDK9-205ENST00000498339 COPS6Q7L5N1 327 aa15.32■□□□□ 0.04
CDK9-205ENST00000498339 CTU1Q7Z7A3 348 aaKnown RBP15.32■□□□□ 0.04
CDK9-205ENST00000498339 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
CDK9-205ENST00000498339 G3V3G9 751 aa15.31■□□□□ 0.04
CDK9-205ENST00000498339 PDIA6Q15084 440 aa15.31■□□□□ 0.04
CDK9-205ENST00000498339 DOK7Q18PE1 504 aa15.31■□□□□ 0.04
CDK9-205ENST00000498339 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
CDK9-205ENST00000498339 LRP10Q7Z4F1 713 aa15.31■□□□□ 0.04
CDK9-205ENST00000498339 EYA3Q99504 573 aa15.31■□□□□ 0.04
CDK9-205ENST00000498339 PAPPA2Q9BXP8 1791 aa15.31■□□□□ 0.04
CDK9-205ENST00000498339 TCIRG1Q13488 830 aa15.3■□□□□ 0.04
CDK9-205ENST00000498339 PSME4Q14997 1843 aa15.3■□□□□ 0.04
CDK9-205ENST00000498339 CDCA5Q96FF9 252 aa15.3■□□□□ 0.04
CDK9-205ENST00000498339 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
CDK9-205ENST00000498339 PNNQ9H307 717 aaKnown RBP15.3■□□□□ 0.04
CDK9-205ENST00000498339 RTL9Q8NET4 1388 aa15.29■□□□□ 0.04
CDK9-205ENST00000498339 CELF1Q92879 486 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms