RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 CUX1P39880 1505 aa8.77□□□□□ -1.01
GGPS1-208ENST00000497327 APBA3O96018 575 aa8.77□□□□□ -1.01
GGPS1-208ENST00000497327 RSPO4Q2I0M5 234 aaPredicted RBP8.77□□□□□ -1.01
GGPS1-208ENST00000497327 NKAPLQ5M9Q1 402 aa8.77□□□□□ -1.01
GGPS1-208ENST00000497327 TPSG1Q9NRR2 321 aa8.77□□□□□ -1.01
GGPS1-208ENST00000497327 ZFATQ9P243 1243 aa8.77□□□□□ -1.01
GGPS1-208ENST00000497327 PDS5BQ9NTI5 1447 aa8.77□□□□□ -1.01
GGPS1-208ENST00000497327 TOP2BQ02880 1626 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 A0A0A0MRY4 1105 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 AFF1P51825 1210 aaKnown RBP8.76□□□□□ -1.01
GGPS1-208ENST00000497327 CDCA8Q53HL2 280 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 PSAPL1Q6NUJ1 521 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 NUDT8Q8WV74 236 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 PNMA5Q96PV4 448 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 SEMA6BQ9H3T3 888 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 JPH1Q9HDC5 661 aaPredicted RBP8.76□□□□□ -1.01
GGPS1-208ENST00000497327 LRFN2Q9ULH4 789 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 PRDM2Q13029 1718 aa8.76□□□□□ -1.01
GGPS1-208ENST00000497327 ZBTB42B2RXF5 422 aa8.75□□□□□ -1.01
GGPS1-208ENST00000497327 MICAL2O94851 1124 aa8.75□□□□□ -1.01
GGPS1-208ENST00000497327 MAP3K6O95382 1288 aa8.75□□□□□ -1.01
GGPS1-208ENST00000497327 ARSDP51689 593 aa8.75□□□□□ -1.01
GGPS1-208ENST00000497327 FAM200AQ8TCP9 573 aa8.75□□□□□ -1.01
GGPS1-208ENST00000497327 BIVM-ERCC5R4GMW8 1640 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 OPLAHO14841 1288 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 SELPP16109 830 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 EPB42P16452 691 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 C11orf91Q3C1V1 193 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 TRAPPC3LQ5T215 181 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 Q8N3U1 123 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 IFT43Q96FT9 208 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 NACC1Q96RE7 527 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 C11orf16Q9NQ32 467 aa8.74□□□□□ -1.01
GGPS1-208ENST00000497327 NOVA2Q9UNW9 492 aaKnown RBP8.74□□□□□ -1.01
GGPS1-208ENST00000497327 CEP164Q9UPV0 1460 aa8.73□□□□□ -1.01
GGPS1-208ENST00000497327 FKBP5Q13451 457 aaPredicted RBP8.73□□□□□ -1.01
GGPS1-208ENST00000497327 ADGRE1Q14246 886 aa8.73□□□□□ -1.01
GGPS1-208ENST00000497327 GRIK5Q16478 980 aa8.73□□□□□ -1.01
GGPS1-208ENST00000497327 ZMIZ1Q9ULJ6 1067 aa8.73□□□□□ -1.01
GGPS1-208ENST00000497327 SOGA1O94964 1423 aa8.72□□□□□ -1.01
GGPS1-208ENST00000497327 ELNP15502 786 aa8.72□□□□□ -1.01
GGPS1-208ENST00000497327 TARSP26639 723 aaKnown RBP8.72□□□□□ -1.01
GGPS1-208ENST00000497327 PLAURQ03405 335 aa8.72□□□□□ -1.01
GGPS1-208ENST00000497327 FAM69CQ0P6D2 419 aa8.72□□□□□ -1.01
GGPS1-208ENST00000497327 DHX32Q7L7V1 743 aaKnown RBP8.72□□□□□ -1.01
GGPS1-208ENST00000497327 KRT25Q7Z3Z0 450 aa8.72□□□□□ -1.01
GGPS1-208ENST00000497327 TRPM4Q8TD43 1214 aa8.72□□□□□ -1.01
GGPS1-208ENST00000497327 LPIN3Q9BQK8 851 aa8.72□□□□□ -1.01
GGPS1-208ENST00000497327 RFX1P22670 979 aa8.71□□□□□ -1.02
GGPS1-208ENST00000497327 SRPK2P78362 688 aaKnown RBP8.71□□□□□ -1.02
GGPS1-208ENST00000497327 MBTPS1Q14703 1052 aa8.71□□□□□ -1.02
GGPS1-208ENST00000497327 OCLNQ16625 522 aa8.71□□□□□ -1.02
GGPS1-208ENST00000497327 FAM35AQ86V20 835 aa8.71□□□□□ -1.02
GGPS1-208ENST00000497327 VTI1AQ96AJ9 217 aa8.71□□□□□ -1.02
GGPS1-208ENST00000497327 USP20Q9Y2K6 914 aa8.71□□□□□ -1.02
GGPS1-208ENST00000497327 URB2Q14146 1524 aaKnown RBP8.7□□□□□ -1.02
GGPS1-208ENST00000497327 C9orf172C9J069 976 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 RGS9O75916 674 aaPredicted RBP8.7□□□□□ -1.02
GGPS1-208ENST00000497327 SASH3O75995 380 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 EGFRP00533 1210 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 CPB1P15086 417 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 GPLD1P80108 840 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 SWI5Q1ZZU3 235 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 COX20Q5RI15 118 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 PERM1Q5SV97 790 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 SHISA2Q6UWI4 295 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 DMRTC2Q8IXT2 367 aaPredicted RBP8.7□□□□□ -1.02
GGPS1-208ENST00000497327 FMR1NBQ8N0W7 255 aaPredicted RBP8.7□□□□□ -1.02
GGPS1-208ENST00000497327 PRIMPOLQ96LW4 560 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 FRRS1LQ9P0K9 344 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
GGPS1-208ENST00000497327 EEA1Q15075 1411 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
GGPS1-208ENST00000497327 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
GGPS1-208ENST00000497327 DYRK3O43781 588 aa8.69□□□□□ -1.02
GGPS1-208ENST00000497327 RAC1P63000 192 aa8.69□□□□□ -1.02
GGPS1-208ENST00000497327 ELOAQ14241 798 aaKnown RBP8.69□□□□□ -1.02
GGPS1-208ENST00000497327 FOXD4L6Q3SYB3 417 aaPredicted RBP8.69□□□□□ -1.02
GGPS1-208ENST00000497327 FOXD4L3Q6VB84 417 aaPredicted RBP8.69□□□□□ -1.02
GGPS1-208ENST00000497327 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
GGPS1-208ENST00000497327 LENG1Q96BZ8 264 aaPredicted RBP8.69□□□□□ -1.02
GGPS1-208ENST00000497327 RTCBQ9Y3I0 505 aaKnown RBP8.69□□□□□ -1.02
GGPS1-208ENST00000497327 RARAP10276 462 aa8.68□□□□□ -1.02
GGPS1-208ENST00000497327 MLLT1Q03111 559 aaPredicted RBP8.68□□□□□ -1.02
GGPS1-208ENST00000497327 PCSK7Q16549 785 aa8.68□□□□□ -1.02
GGPS1-208ENST00000497327 MSL1Q68DK7 614 aa8.68□□□□□ -1.02
GGPS1-208ENST00000497327 TREML1Q86YW5 311 aa8.68□□□□□ -1.02
GGPS1-208ENST00000497327 STK32AQ8WU08 396 aa8.68□□□□□ -1.02
GGPS1-208ENST00000497327 KCNMB2Q9Y691 235 aa8.68□□□□□ -1.02
GGPS1-208ENST00000497327 LOC105371045A0A1W2PR82 267 aa8.67□□□□□ -1.02
GGPS1-208ENST00000497327 FAM26DQ5JW98 314 aa8.67□□□□□ -1.02
GGPS1-208ENST00000497327 FGD5Q6ZNL6 1462 aa8.67□□□□□ -1.02
GGPS1-208ENST00000497327 TTC9Q92623 222 aa8.67□□□□□ -1.02
GGPS1-208ENST00000497327 SAP130Q9H0E3 1048 aa8.67□□□□□ -1.02
GGPS1-208ENST00000497327 MRC2Q9UBG0 1479 aa8.66□□□□□ -1.02
GGPS1-208ENST00000497327 PRMT3O60678 531 aa8.66□□□□□ -1.02
GGPS1-208ENST00000497327 NRLP54845 237 aa8.66□□□□□ -1.02
GGPS1-208ENST00000497327 TXNRD3Q86VQ6 643 aa8.66□□□□□ -1.02
GGPS1-208ENST00000497327 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms