RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 AP1G2O75843 785 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 POLD1P28340 1107 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 PDE4CQ08493 712 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 PTCRAQ6ISU1 281 aaPredicted RBP4.45□□□□□ -1.7
SHTN1-206ENST00000497044 ARHGEF25Q86VW2 580 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 PPP1R1BQ9UD71 204 aaPredicted RBP4.45□□□□□ -1.7
SHTN1-206ENST00000497044 FER1L6Q2WGJ9 1857 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 EPHA4P54764 986 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 TGFB2P61812 414 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 LSM11P83369 360 aaKnown RBP eCLIP4.45□□□□□ -1.76e-6■■□□□ 14.5
SHTN1-206ENST00000497044 TJAP1Q5JTD0 557 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 NUTM1Q86Y26 1132 aa4.45□□□□□ -1.7
SHTN1-206ENST00000497044 HS3ST6Q96QI5 342 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 PRDM11Q9NQV5 511 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 PCDHGA11Q9Y5H2 935 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 N4BP2Q86UW6 1770 aaPredicted RBP4.44□□□□□ -1.7
SHTN1-206ENST00000497044 DDX60Q8IY21 1712 aaKnown RBP4.44□□□□□ -1.7
SHTN1-206ENST00000497044 CLDN10P78369 228 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 TXNRD1Q16881 649 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 FBXO33Q7Z6M2 555 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 C7orf43Q8WVR3 580 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 RIC1Q4ADV7 1423 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 SENP3-EIF4A1A0A087X0R7 540 aa4.44□□□□□ -1.7
SHTN1-206ENST00000497044 VARS2Q5ST30 1063 aaKnown RBP4.44□□□□□ -1.7
SHTN1-206ENST00000497044 USB1Q9BQ65 265 aaKnown RBP4.44□□□□□ -1.7
SHTN1-206ENST00000497044 TONSLQ96HA7 1378 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 CAPN2P17655 700 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 TMEM164Q5U3C3 297 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 RNF135Q8IUD6 432 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 NUDT16Q96DE0 195 aaKnown RBP4.43□□□□□ -1.7
SHTN1-206ENST00000497044 LTBP3Q9NS15 1303 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 KCNH2Q12809 1159 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 DDB1Q16531 1140 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 TSGA10IPQ3SY00 556 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 DDX17Q92841 729 aaKnown RBP4.43□□□□□ -1.7
SHTN1-206ENST00000497044 EGFL7Q9UHF1 273 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 SCN11AQ9UI33 1791 aa4.43□□□□□ -1.7
SHTN1-206ENST00000497044 LHX8Q68G74 356 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 SCUBE3Q8IX30 993 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 KLRG1Q96E93 195 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 SIPA1L3O60292 1781 aaPredicted RBP4.42□□□□□ -1.7
SHTN1-206ENST00000497044 PNPLA7Q6ZV29 1317 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 KDRP35968 1356 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 TOMM70O94826 608 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 TRIM37O94972 964 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 FOXK2Q01167 660 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 Q3C1V9 767 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 RC3H1Q5TC82 1133 aaKnown RBP4.42□□□□□ -1.7
SHTN1-206ENST00000497044 SMARCC1Q92922 1105 aaPredicted RBP4.42□□□□□ -1.7
SHTN1-206ENST00000497044 CCDC85AQ96PX6 553 aaPredicted RBP4.42□□□□□ -1.7
SHTN1-206ENST00000497044 ZBBXA8MT70 800 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 PRAM1Q96QH2 718 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 TRPM7Q96QT4 1865 aa4.42□□□□□ -1.7
SHTN1-206ENST00000497044 GCP02774 474 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 WEE1P30291 646 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 CRTC2Q53ET0 693 aaPredicted RBP4.41□□□□□ -1.7
SHTN1-206ENST00000497044 MARCH10Q8NA82 808 aaPredicted RBP4.41□□□□□ -1.7
SHTN1-206ENST00000497044 MPHOSPH9Q99550 1183 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 FHDC1Q9C0D6 1143 aaPredicted RBP4.41□□□□□ -1.7
SHTN1-206ENST00000497044 ZNF609O15014 1411 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 RAD21O60216 631 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 ITGBL1O95965 494 aaPredicted RBP4.41□□□□□ -1.7
SHTN1-206ENST00000497044 MTMR7Q9Y216 660 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 COL19A1Q14993 1142 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 PPARGC1BQ86YN6 1023 aaKnown RBP4.41□□□□□ -1.7
SHTN1-206ENST00000497044 STK32AQ8WU08 396 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 CALR3Q96L12 384 aaKnown RBP4.41□□□□□ -1.7
SHTN1-206ENST00000497044 KIAA1522Q9P206 1035 aaPredicted RBP4.41□□□□□ -1.7
SHTN1-206ENST00000497044 ACEP12821 1306 aa4.41□□□□□ -1.7
SHTN1-206ENST00000497044 POTECB2RU33 542 aa4.4□□□□□ -1.7
SHTN1-206ENST00000497044 ITGAEP38570 1179 aa4.4□□□□□ -1.7
SHTN1-206ENST00000497044 ABL2P42684 1182 aa4.4□□□□□ -1.7
SHTN1-206ENST00000497044 LTBP1Q14766 1721 aa4.4□□□□□ -1.7
SHTN1-206ENST00000497044 CARNS1A5YM72 827 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 ZEB1P37275 1124 aaPredicted RBP4.4□□□□□ -1.71
SHTN1-206ENST00000497044 WAPLQ7Z5K2 1190 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 SOWAHDA6NJG2 315 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L15C9J2P7 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L10C9JJH3 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L13C9JLJ4 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L12C9JPN9 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L11C9JVI0 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L21D6R901 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L18D6R9N7 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L22D6RA61 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L17D6RBQ6 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L19D6RCP7 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L20D6RJB6 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 EXOC5O00471 708 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 USP17L24Q0WX57 530 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 NPM2Q86SE8 214 aaKnown RBP4.4□□□□□ -1.71
SHTN1-206ENST00000497044 STAG2Q8N3U4 1231 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 CDK15Q96Q40 435 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 TSR3Q9UJK0 312 aaKnown RBP4.4□□□□□ -1.71
SHTN1-206ENST00000497044 ERBB3P21860 1342 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 A0A1W2PP64 1363 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 RAB3GAP2Q9H2M9 1393 aa4.4□□□□□ -1.71
SHTN1-206ENST00000497044 RGPD2P0DJD1 1756 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 CNTNAP4Q9C0A0 1308 aa4.39□□□□□ -1.71
SHTN1-206ENST00000497044 SWI5Q1ZZU3 235 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms