RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 ARID3AQ99856 593 aa11.85□□□□□ -0.51
TARDBP-210ENST00000496840 SUV39H2Q9H5I1 410 aa11.85□□□□□ -0.51
TARDBP-210ENST00000496840 DNAJB12Q9NXW2 375 aaKnown RBP11.85□□□□□ -0.51
TARDBP-210ENST00000496840 M0R082 166 aa11.84□□□□□ -0.51
TARDBP-210ENST00000496840 SASH3O75995 380 aa11.84□□□□□ -0.51
TARDBP-210ENST00000496840 RARAP10276 462 aa11.84□□□□□ -0.51
TARDBP-210ENST00000496840 TARSP26639 723 aaKnown RBP11.84□□□□□ -0.51
TARDBP-210ENST00000496840 ZAP70P43403 619 aa11.84□□□□□ -0.51
TARDBP-210ENST00000496840 ZNF417Q8TAU3 575 aa11.84□□□□□ -0.51
TARDBP-210ENST00000496840 ZNF587Q96SQ5 575 aaPredicted RBP11.84□□□□□ -0.51
TARDBP-210ENST00000496840 TBC1D8BQ0IIM8 1120 aa11.83□□□□□ -0.52
TARDBP-210ENST00000496840 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
TARDBP-210ENST00000496840 KRT25Q7Z3Z0 450 aa11.83□□□□□ -0.52
TARDBP-210ENST00000496840 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
TARDBP-210ENST00000496840 PIK3R5Q8WYR1 880 aa11.83□□□□□ -0.52
TARDBP-210ENST00000496840 TRIM11Q96F44 468 aa11.83□□□□□ -0.52
TARDBP-210ENST00000496840 IGFLR1Q9H665 355 aa11.83□□□□□ -0.52
TARDBP-210ENST00000496840 PHLDB3Q6NSJ2 640 aa11.82□□□□□ -0.52
TARDBP-210ENST00000496840 ZBTB39O15060 712 aa11.81□□□□□ -0.52
TARDBP-210ENST00000496840 ARID4AP29374 1257 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-210ENST00000496840 GPLD1P80108 840 aa11.81□□□□□ -0.52
TARDBP-210ENST00000496840 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-210ENST00000496840 TRIP4Q15650 581 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-210ENST00000496840 MTMR7Q9Y216 660 aa11.81□□□□□ -0.52
TARDBP-210ENST00000496840 CARNS1A5YM72 827 aa11.8□□□□□ -0.52
TARDBP-210ENST00000496840 SCNN1AP37088 669 aa11.8□□□□□ -0.52
TARDBP-210ENST00000496840 NRLP54845 237 aa11.8□□□□□ -0.52
TARDBP-210ENST00000496840 PLVAPQ9BX97 442 aa11.8□□□□□ -0.52
TARDBP-210ENST00000496840 TLR7Q9NYK1 1049 aaKnown RBP11.8□□□□□ -0.52
TARDBP-210ENST00000496840 NAGPAQ9UK23 515 aa11.8□□□□□ -0.52
TARDBP-210ENST00000496840 SPDYE3A6NKU9 549 aa11.79□□□□□ -0.52
TARDBP-210ENST00000496840 IGHA1P01876 353 aa11.79□□□□□ -0.52
TARDBP-210ENST00000496840 B4GALNT3Q6L9W6 998 aa11.79□□□□□ -0.52
TARDBP-210ENST00000496840 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-210ENST00000496840 ZBTB42B2RXF5 422 aa11.78□□□□□ -0.52
TARDBP-210ENST00000496840 LILRB5O75023 590 aa11.78□□□□□ -0.52
TARDBP-210ENST00000496840 HOXD8P13378 290 aaPredicted RBP11.78□□□□□ -0.52
TARDBP-210ENST00000496840 NID1P14543 1247 aa11.78□□□□□ -0.52
TARDBP-210ENST00000496840 SOX18P35713 384 aa11.78□□□□□ -0.52
TARDBP-210ENST00000496840 PLA2G4EQ3MJ16 856 aa11.78□□□□□ -0.52
TARDBP-210ENST00000496840 C8orf86Q6ZUL3 223 aa11.78□□□□□ -0.52
TARDBP-210ENST00000496840 NLRP13Q86W25 1043 aa11.78□□□□□ -0.52
TARDBP-210ENST00000496840 FRRS1LQ9P0K9 344 aa11.78□□□□□ -0.52
TARDBP-210ENST00000496840 FNDC3AQ9Y2H6 1198 aaKnown RBP11.78□□□□□ -0.52
TARDBP-210ENST00000496840 KRBA1A5PL33 1030 aa11.77□□□□□ -0.53
TARDBP-210ENST00000496840 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
TARDBP-210ENST00000496840 FAM35AQ86V20 835 aa11.77□□□□□ -0.53
TARDBP-210ENST00000496840 GPR152Q8TDT2 470 aa11.77□□□□□ -0.53
TARDBP-210ENST00000496840 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
TARDBP-210ENST00000496840 MMP20O60882 483 aa11.76□□□□□ -0.53
TARDBP-210ENST00000496840 NPR3P17342 541 aa11.76□□□□□ -0.53
TARDBP-210ENST00000496840 PLAURQ03405 335 aa11.76□□□□□ -0.53
TARDBP-210ENST00000496840 ITGB2P05107 769 aa11.75□□□□□ -0.53
TARDBP-210ENST00000496840 PSAPP07602 524 aa11.75□□□□□ -0.53
TARDBP-210ENST00000496840 PDE4CQ08493 712 aa11.75□□□□□ -0.53
TARDBP-210ENST00000496840 NOM1Q5C9Z4 860 aaKnown RBP11.75□□□□□ -0.53
TARDBP-210ENST00000496840 JPH1Q9HDC5 661 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-210ENST00000496840 RGS9O75916 674 aaPredicted RBP11.74□□□□□ -0.53
TARDBP-210ENST00000496840 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
TARDBP-210ENST00000496840 CPB1P15086 417 aa11.74□□□□□ -0.53
TARDBP-210ENST00000496840 GPAT2Q6NUI2 795 aa11.74□□□□□ -0.53
TARDBP-210ENST00000496840 NUDT8Q8WV74 236 aa11.74□□□□□ -0.53
TARDBP-210ENST00000496840 TTC9Q92623 222 aa11.74□□□□□ -0.53
TARDBP-210ENST00000496840 LPIN3Q9BQK8 851 aa11.74□□□□□ -0.53
TARDBP-210ENST00000496840 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
TARDBP-210ENST00000496840 MPSTP25325 297 aa11.73□□□□□ -0.53
TARDBP-210ENST00000496840 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
TARDBP-210ENST00000496840 ALKBH2Q6NS38 261 aa11.73□□□□□ -0.53
TARDBP-210ENST00000496840 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
TARDBP-210ENST00000496840 AFF1P51825 1210 aaKnown RBP11.72□□□□□ -0.53
TARDBP-210ENST00000496840 PERM1Q5SV97 790 aa11.72□□□□□ -0.53
TARDBP-210ENST00000496840 ATCAYQ86WG3 371 aa11.72□□□□□ -0.53
TARDBP-210ENST00000496840 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
TARDBP-210ENST00000496840 MLLT1Q03111 559 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-210ENST00000496840 PRRT3Q5FWE3 981 aa11.71□□□□□ -0.53
TARDBP-210ENST00000496840 PDE12Q6L8Q7 609 aaKnown RBP11.71□□□□□ -0.53
TARDBP-210ENST00000496840 OR13H1Q8NG92 308 aa11.71□□□□□ -0.53
TARDBP-210ENST00000496840 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
TARDBP-210ENST00000496840 FAM13AO94988 1023 aa11.7□□□□□ -0.54
TARDBP-210ENST00000496840 ELMSAN1Q6PJG2 1045 aa11.7□□□□□ -0.54
TARDBP-210ENST00000496840 ILDR2Q71H61 639 aa11.7□□□□□ -0.54
TARDBP-210ENST00000496840 EDEM1Q92611 657 aa11.7□□□□□ -0.54
TARDBP-210ENST00000496840 EGFL7Q9UHF1 273 aa11.7□□□□□ -0.54
TARDBP-210ENST00000496840 LOC102724428A0A0B4J2F2 783 aa11.69□□□□□ -0.54
TARDBP-210ENST00000496840 PCSK2P16519 638 aa11.69□□□□□ -0.54
TARDBP-210ENST00000496840 MZF1P28698 734 aaPredicted RBP11.69□□□□□ -0.54
TARDBP-210ENST00000496840 SIK1P57059 783 aa11.69□□□□□ -0.54
TARDBP-210ENST00000496840 FKBP4Q02790 459 aaKnown RBP eCLIP11.69□□□□□ -0.54
TARDBP-210ENST00000496840 MTMR3Q13615 1198 aa11.69□□□□□ -0.54
TARDBP-210ENST00000496840 GRIK5Q16478 980 aa11.69□□□□□ -0.54
TARDBP-210ENST00000496840 XKR5Q6UX68 686 aa11.69□□□□□ -0.54
TARDBP-210ENST00000496840 MSTNO14793 375 aa11.68□□□□□ -0.54
TARDBP-210ENST00000496840 PDGFAP04085 211 aa11.68□□□□□ -0.54
TARDBP-210ENST00000496840 EIF2AK2P19525 551 aaKnown RBP11.68□□□□□ -0.54
TARDBP-210ENST00000496840 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
TARDBP-210ENST00000496840 SPOCK3Q9BQ16 436 aa11.68□□□□□ -0.54
TARDBP-210ENST00000496840 ABI2Q9NYB9 513 aaPredicted RBP11.68□□□□□ -0.54
TARDBP-210ENST00000496840 PROCP04070 461 aa11.67□□□□□ -0.54
TARDBP-210ENST00000496840 DNM1Q05193 864 aaKnown RBP11.67□□□□□ -0.54
TARDBP-210ENST00000496840 TRAPPC3LQ5T215 181 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms