RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-206ENST00000495462 SLC51AQ86UW1 340 aa8.59□□□□□ -1.03
RPN1-206ENST00000495462 RTF1Q92541 710 aaKnown RBP8.59□□□□□ -1.03
RPN1-206ENST00000495462 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
RPN1-206ENST00000495462 ARIH1Q9Y4X5 557 aaPredicted RBP8.59□□□□□ -1.03
RPN1-206ENST00000495462 CACNA1SQ13698 1873 aa8.59□□□□□ -1.03
RPN1-206ENST00000495462 WDR90Q96KV7 1748 aa8.58□□□□□ -1.04
RPN1-206ENST00000495462 HTATSF1O43719 755 aaKnown RBP8.58□□□□□ -1.04
RPN1-206ENST00000495462 SRGNP10124 158 aa8.58□□□□□ -1.04
RPN1-206ENST00000495462 LSM11P83369 360 aaKnown RBP eCLIP8.58□□□□□ -1.04
RPN1-206ENST00000495462 TAF7Q15545 349 aaPredicted RBP8.58□□□□□ -1.04
RPN1-206ENST00000495462 NGEFQ8N5V2 710 aa8.58□□□□□ -1.04
RPN1-206ENST00000495462 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
RPN1-206ENST00000495462 CNBD1Q8NA66 436 aa8.58□□□□□ -1.04
RPN1-206ENST00000495462 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
RPN1-206ENST00000495462 TNRC6CQ9HCJ0 1690 aaKnown RBP8.58□□□□□ -1.04
RPN1-206ENST00000495462 FER1L6Q2WGJ9 1857 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 KDM2BQ8NHM5 1336 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 GLTPD2A6NH11 291 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 ARHGAP33O14559 1287 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 PDE6BP35913 854 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 APLP1P51693 650 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 EIF4A1P60842 406 aaKnown RBP8.57□□□□□ -1.04
RPN1-206ENST00000495462 PRPF40BQ6NWY9 871 aaKnown RBP8.57□□□□□ -1.04
RPN1-206ENST00000495462 TTLL7Q6ZT98 887 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 LAMB4A4D0S4 1761 aa8.57□□□□□ -1.04
RPN1-206ENST00000495462 ST5P78524 1137 aa8.56□□□□□ -1.04
RPN1-206ENST00000495462 PDIA6Q15084 440 aa8.56□□□□□ -1.04
RPN1-206ENST00000495462 NFE2L2Q16236 605 aa8.56□□□□□ -1.04
RPN1-206ENST00000495462 STYK1Q6J9G0 422 aa8.56□□□□□ -1.04
RPN1-206ENST00000495462 NBPF5PQ86XG9 351 aaPredicted RBP8.56□□□□□ -1.04
RPN1-206ENST00000495462 MASTLQ96GX5 879 aa8.56□□□□□ -1.04
RPN1-206ENST00000495462 NIP7Q9Y221 180 aaKnown RBP eCLIP8.56□□□□□ -1.04
RPN1-206ENST00000495462 ABCC12Q96J65 1359 aa8.56□□□□□ -1.04
RPN1-206ENST00000495462 ARFGEF2Q9Y6D5 1785 aa8.56□□□□□ -1.04
RPN1-206ENST00000495462 KLRG2A4D1S0 409 aaPredicted RBP8.55□□□□□ -1.04
RPN1-206ENST00000495462 DDNO94850 711 aaPredicted RBP8.55□□□□□ -1.04
RPN1-206ENST00000495462 MYL6BP14649 208 aa8.55□□□□□ -1.04
RPN1-206ENST00000495462 FSTL1Q12841 308 aa8.55□□□□□ -1.04
RPN1-206ENST00000495462 MMRN1Q13201 1228 aa8.55□□□□□ -1.04
RPN1-206ENST00000495462 ERFEQ4G0M1 354 aa8.55□□□□□ -1.04
RPN1-206ENST00000495462 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
RPN1-206ENST00000495462 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
RPN1-206ENST00000495462 C16orf71Q8IYS4 520 aaPredicted RBP8.55□□□□□ -1.04
RPN1-206ENST00000495462 RRP7AQ9Y3A4 280 aaKnown RBP8.55□□□□□ -1.04
RPN1-206ENST00000495462 UBN2Q6ZU65 1347 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
RPN1-206ENST00000495462 NPHP1O15259 732 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 ANXA1P04083 346 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 VEGFAP15692 232 aaPredicted RBP8.54□□□□□ -1.04
RPN1-206ENST00000495462 GPTP24298 496 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 PROSER3Q2NL68 480 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 LRP10Q7Z4F1 713 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 NPM2Q86SE8 214 aaKnown RBP8.54□□□□□ -1.04
RPN1-206ENST00000495462 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 TAOK3Q9H2K8 898 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 ZBTB3Q9H5J0 574 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 DICER1Q9UPY3 1922 aaKnown RBP8.54□□□□□ -1.04
RPN1-206ENST00000495462 SNED1Q8TER0 1413 aa8.54□□□□□ -1.04
RPN1-206ENST00000495462 COL4A5P29400 1685 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 NUP98P52948 1817 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 DDX10Q13206 875 aaKnown RBP8.53□□□□□ -1.04
RPN1-206ENST00000495462 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 SUSD4Q5VX71 490 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 TPTE2Q6XPS3 522 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 CCDC146Q8IYE0 955 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 SMC1BQ8NDV3 1235 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 ZDHHC16Q969W1 377 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 KLRG1Q96E93 195 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 ZNF277Q9NRM2 450 aaPredicted RBP8.53□□□□□ -1.04
RPN1-206ENST00000495462 PDZRN3Q9UPQ7 1066 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 PCDHGA10Q9Y5H3 936 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 MAP3K15Q6ZN16 1313 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 ZNF541Q9H0D2 1346 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 LTBP3Q9NS15 1303 aa8.53□□□□□ -1.04
RPN1-206ENST00000495462 SPDYE16A6NNV3 312 aaPredicted RBP8.52□□□□□ -1.05
RPN1-206ENST00000495462 NPR1P16066 1061 aa8.52□□□□□ -1.05
RPN1-206ENST00000495462 PSEN2P49810 448 aa8.52□□□□□ -1.05
RPN1-206ENST00000495462 RIPK4P57078 832 aa8.52□□□□□ -1.05
RPN1-206ENST00000495462 JMYQ8N9B5 988 aa8.52□□□□□ -1.05
RPN1-206ENST00000495462 PNISRQ8TF01 805 aaKnown RBP8.52□□□□□ -1.05
RPN1-206ENST00000495462 ZNF428Q96B54 188 aa8.52□□□□□ -1.05
RPN1-206ENST00000495462 PCNTO95613 3336 aa8.52□□□□□ -1.05
RPN1-206ENST00000495462 ERVV-1B6SEH8 477 aa8.51□□□□□ -1.05
RPN1-206ENST00000495462 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
RPN1-206ENST00000495462 TMPOP42166 694 aaKnown RBP8.51□□□□□ -1.05
RPN1-206ENST00000495462 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
RPN1-206ENST00000495462 CCDC93Q567U6 631 aa8.51□□□□□ -1.05
RPN1-206ENST00000495462 ANKRD13DQ6ZTN6 518 aa8.51□□□□□ -1.05
RPN1-206ENST00000495462 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
RPN1-206ENST00000495462 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
RPN1-206ENST00000495462 TSPYL4Q9UJ04 414 aa8.51□□□□□ -1.05
RPN1-206ENST00000495462 MAPK8IP3Q9UPT6 1336 aa8.51□□□□□ -1.05
RPN1-206ENST00000495462 TK2O00142 265 aa8.5□□□□□ -1.05
RPN1-206ENST00000495462 TCERG1O14776 1098 aaKnown RBP8.5□□□□□ -1.05
RPN1-206ENST00000495462 NTSR2O95665 410 aa8.5□□□□□ -1.05
RPN1-206ENST00000495462 FKBP4Q02790 459 aaKnown RBP eCLIP8.5□□□□□ -1.05
RPN1-206ENST00000495462 NEUROD2Q15784 382 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms