RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.28□□□□□ -1.24
FGD4-208ENST00000494977 CAPN7Q9Y6W3 813 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 CCDC69A6NI79 296 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 POTEB2H3BUK9 544 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 ECM2O94769 699 aaPredicted RBP7.28□□□□□ -1.24
FGD4-208ENST00000494977 KIAA0754O94854 1291 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 CDR1P51861 262 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 CDC37Q16543 378 aaPredicted RBP7.28□□□□□ -1.24
FGD4-208ENST00000494977 DBN1Q16643 649 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 CCDC144BQ3MJ40 725 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 CEP85LQ5SZL2 805 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 SPATA21Q7Z572 469 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 SPATS2Q86XZ4 545 aaKnown RBP7.28□□□□□ -1.24
FGD4-208ENST00000494977 CCDC144CPQ8IYA2 1237 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 LRRN4CLQ8ND94 238 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 LZTS2Q9BRK4 669 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 CD248Q9HCU0 757 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 TCOF1Q13428 1488 aaKnown RBP7.28□□□□□ -1.24
FGD4-208ENST00000494977 LAMC3Q9Y6N6 1575 aa7.28□□□□□ -1.24
FGD4-208ENST00000494977 SHTN1A0MZ66 631 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 FSBPO95073 299 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 OATP04181 439 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 GBP2P32456 591 aaPredicted RBP7.27□□□□□ -1.25
FGD4-208ENST00000494977 PEX19P40855 299 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 ETF1P62495 437 aaKnown RBP7.27□□□□□ -1.25
FGD4-208ENST00000494977 CCZ1BP86790 482 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 CCZ1P86791 482 aaPredicted RBP7.27□□□□□ -1.25
FGD4-208ENST00000494977 TYRO3Q06418 890 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 SNX1Q13596 522 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 LAMB3Q13751 1172 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 CDCA2Q69YH5 1023 aaPredicted RBP7.27□□□□□ -1.25
FGD4-208ENST00000494977 MAB21L3Q8N8X9 362 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 SPDYE1Q8NFV5 336 aaPredicted RBP7.27□□□□□ -1.25
FGD4-208ENST00000494977 EZH1Q92800 747 aaPredicted RBP7.27□□□□□ -1.25
FGD4-208ENST00000494977 ATP6V0A4Q9HBG4 840 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 CBX8Q9HC52 389 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 LMCD1Q9NZU5 365 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 TNNQ9UQP3 1299 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 GOLGA6L19H0YKK7 550 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 URI1O94763 535 aaPredicted RBP7.27□□□□□ -1.25
FGD4-208ENST00000494977 PYGLP06737 847 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 TUBB4BP68371 445 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 RASA3Q14644 834 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 CCDC178Q5BJE1 867 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 ISM2Q6H9L7 571 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 SARM1Q6SZW1 724 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 ITPRIPQ8IWB1 547 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 EXOC8Q8IYI6 725 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 MIPOL1Q8TD10 442 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 MAGEC3Q8TD91 643 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 AFAP1L1Q8TED9 768 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 PPP1R13BQ96KQ4 1090 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 CARD6Q9BX69 1037 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 PARD6BQ9BYG5 372 aa7.27□□□□□ -1.25
FGD4-208ENST00000494977 RPAP1Q9BWH6 1393 aaPredicted RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 RBM47A0AV96 593 aaKnown RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 ZSCAN9O15535 394 aaPredicted RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 AHCYL1O43865 530 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 CHGAP10645 457 aaKnown RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 TPP2P29144 1249 aaPredicted RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 SLC8A1P32418 973 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 ARHGAP25P42331 645 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 FOXD4L6Q3SYB3 417 aaPredicted RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 NUTM2GQ5VZR2 741 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 ARMC3Q5W041 872 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 FOXD4L3Q6VB84 417 aaPredicted RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 B4GALNT4Q76KP1 1039 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 SDCCAG8Q86SQ7 713 aaPredicted RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 MFN1Q8IWA4 741 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 SDR16C5Q8N3Y7 309 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 NUP133Q8WUM0 1156 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 GOLGA1Q92805 767 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 CCDC102AQ96A19 550 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 OSBPL9Q96SU4 736 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 NUP62CLQ9H1M0 184 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 KLC4Q9NSK0 619 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 RGL1Q9NZL6 768 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 COL17A1Q9UMD9 1497 aaPredicted RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 TCHHQ07283 1943 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 GOLGA6L10A6NI86 522 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 H7C1W4 665 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 ATXN8OSP0DMR3 200 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 PAX3P23760 479 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 TXLNAP40222 546 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 SFSWAPQ12872 951 aaKnown RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 IQCB1Q15051 598 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 ANO6Q4KMQ2 910 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 MFSD4BQ5TF39 518 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 DZIP3Q86Y13 1208 aaKnown RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 TRIM42Q8IWZ5 723 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 IRX2Q9BZI1 471 aaPredicted RBP7.26□□□□□ -1.25
FGD4-208ENST00000494977 GBP3Q9H0R5 595 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 PLEKHA4Q9H4M7 779 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 FAM204AQ9H8W3 233 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 SUN2Q9UH99 717 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 CNPY2Q9Y2B0 182 aa7.26□□□□□ -1.25
FGD4-208ENST00000494977 RPGRIP1LQ68CZ1 1315 aa7.25□□□□□ -1.25
FGD4-208ENST00000494977 CLTCL1P53675 1640 aa7.25□□□□□ -1.25
FGD4-208ENST00000494977 FESP07332 822 aa7.25□□□□□ -1.25
FGD4-208ENST00000494977 RANBP1P43487 201 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms