RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 ST5P78524 1137 aa10.6□□□□□ -0.71
DEPDC5-220ENST00000494065 NFE2L2Q16236 605 aa10.6□□□□□ -0.71
DEPDC5-220ENST00000494065 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
DEPDC5-220ENST00000494065 TBC1D9BQ66K14 1250 aa10.6□□□□□ -0.71
DEPDC5-220ENST00000494065 BICDL1Q6ZP65 573 aa10.6□□□□□ -0.71
DEPDC5-220ENST00000494065 DZIP3Q86Y13 1208 aaKnown RBP10.6□□□□□ -0.71
DEPDC5-220ENST00000494065 C2CD5Q86YS7 1000 aa10.6□□□□□ -0.71
DEPDC5-220ENST00000494065 CNBD1Q8NA66 436 aa10.6□□□□□ -0.71
DEPDC5-220ENST00000494065 PDE6BP35913 854 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 DCTN1Q14203 1278 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 TAF7Q15545 349 aaPredicted RBP10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 TTLL6Q8N841 843 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 KCNK17Q96T54 332 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 BRIP1Q9BX63 1249 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 SLC4A5Q9BY07 1137 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 RNF181Q9P0P0 153 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 TBC1D2BQ9UPU7 963 aa10.59□□□□□ -0.71
DEPDC5-220ENST00000494065 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.71
DEPDC5-220ENST00000494065 MYBBP1AQ9BQG0 1328 aaKnown RBP10.58□□□□□ -0.71
DEPDC5-220ENST00000494065 LMOD3Q0VAK6 560 aa10.58□□□□□ -0.72
DEPDC5-220ENST00000494065 PTGDRQ13258 359 aa10.58□□□□□ -0.72
DEPDC5-220ENST00000494065 PRR5LQ6MZQ0 368 aa10.58□□□□□ -0.72
DEPDC5-220ENST00000494065 CLEC4GQ6UXB4 293 aa10.58□□□□□ -0.72
DEPDC5-220ENST00000494065 GPIHBP1Q8IV16 184 aa10.58□□□□□ -0.72
DEPDC5-220ENST00000494065 SBF1O95248 1867 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 GPR37O15354 613 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 HSPA6P17066 643 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 CDHR5Q9HBB8 845 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 USP16Q9Y5T5 823 aa10.57□□□□□ -0.72
DEPDC5-220ENST00000494065 LMNB1P20700 586 aa10.56□□□□□ -0.72
DEPDC5-220ENST00000494065 PSEN2P49810 448 aa10.56□□□□□ -0.72
DEPDC5-220ENST00000494065 RASSF7Q02833 373 aa10.56□□□□□ -0.72
DEPDC5-220ENST00000494065 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
DEPDC5-220ENST00000494065 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
DEPDC5-220ENST00000494065 C16orf71Q8IYS4 520 aaPredicted RBP10.56□□□□□ -0.72
DEPDC5-220ENST00000494065 ERBB4Q15303 1308 aa10.56□□□□□ -0.72
DEPDC5-220ENST00000494065 CACNA1SQ13698 1873 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 IBTKQ9P2D0 1353 aaPredicted RBP10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 PRAMEF22A3QJZ6 481 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 TK2O00142 265 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 TOMM70O94826 608 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 COL9A1P20849 921 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 PIP4K2AP48426 406 aaPredicted RBP10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 STYK1Q6J9G0 422 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 KIF6Q6ZMV9 814 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 CNKSR1Q969H4 720 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 ZNF622Q969S3 477 aaKnown RBP eCLIP10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
DEPDC5-220ENST00000494065 NBPF26B4DH59 902 aa10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 HIC1Q14526 733 aa10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 WDR43Q15061 677 aaKnown RBP eCLIP10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 FER1L6Q2WGJ9 1857 aa10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 RIC1Q4ADV7 1423 aa10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 NBPF10Q6P3W6 841 aaKnown RBP10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 NBPF15Q8N660 670 aa10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 BABAM1Q9NWV8 329 aa10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 LTBP3Q9NS15 1303 aa10.54□□□□□ -0.72
DEPDC5-220ENST00000494065 DICER1Q9UPY3 1922 aaKnown RBP10.53□□□□□ -0.72
DEPDC5-220ENST00000494065 NFKBIEO00221 500 aa10.53□□□□□ -0.72
DEPDC5-220ENST00000494065 EIF4A1P60842 406 aaKnown RBP10.53□□□□□ -0.72
DEPDC5-220ENST00000494065 MASTLQ96GX5 879 aa10.53□□□□□ -0.72
DEPDC5-220ENST00000494065 NYXQ9GZU5 481 aa10.53□□□□□ -0.72
DEPDC5-220ENST00000494065 TSPYL4Q9UJ04 414 aa10.53□□□□□ -0.72
DEPDC5-220ENST00000494065 ERVV-1B6SEH8 477 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 SRGNP10124 158 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 NPR1P16066 1061 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 APLP1P51693 650 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 FSTL1Q12841 308 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 DDX10Q13206 875 aaKnown RBP10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 DMRTA1Q5VZB9 504 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 PRPF40BQ6NWY9 871 aaKnown RBP10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 TPTE2Q6XPS3 522 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 THUMPD2Q9BTF0 503 aaKnown RBP10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 TAOK3Q9H2K8 898 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 MIS18AQ9NYP9 233 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 WDR90Q96KV7 1748 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 MAP3K15Q6ZN16 1313 aa10.52□□□□□ -0.73
DEPDC5-220ENST00000494065 NUP98P52948 1817 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 C21orf2O43822 256 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 TMPOP42166 694 aaKnown RBP10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 PRSS12P56730 875 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 RIPK4P57078 832 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 CCDC93Q567U6 631 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 CCDC24Q8N4L8 307 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 TTC13Q8NBP0 860 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 ANKRD36CQ5JPF3 1778 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 CCDC88AQ3V6T2 1871 aa10.51□□□□□ -0.73
DEPDC5-220ENST00000494065 CEP350Q5VT06 3117 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms