RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
NR1H3-225ENST00000494018 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
NR1H3-225ENST00000494018 TRIM17Q9Y577 477 aa13.12□□□□□ -0.31
NR1H3-225ENST00000494018 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
NR1H3-225ENST00000494018 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
NR1H3-225ENST00000494018 FKTNO75072 461 aa13.11□□□□□ -0.31
NR1H3-225ENST00000494018 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
NR1H3-225ENST00000494018 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
NR1H3-225ENST00000494018 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
NR1H3-225ENST00000494018 RANBP2P49792 3224 aaKnown RBP13.11□□□□□ -0.31
NR1H3-225ENST00000494018 PSMD14O00487 310 aa13.1□□□□□ -0.31
NR1H3-225ENST00000494018 DPP8Q6V1X1 898 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-225ENST00000494018 CRAMP1Q96RY5 1269 aa13.1□□□□□ -0.31
NR1H3-225ENST00000494018 TMX4Q9H1E5 349 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-225ENST00000494018 KCNQ5Q9NR82 932 aa13.1□□□□□ -0.31
NR1H3-225ENST00000494018 GGA3Q9NZ52 723 aa13.1□□□□□ -0.31
NR1H3-225ENST00000494018 TAF1P21675 1872 aa13.1□□□□□ -0.31
NR1H3-225ENST00000494018 CDHR2Q9BYE9 1310 aa13.1□□□□□ -0.31
NR1H3-225ENST00000494018 NUP98P52948 1817 aa13.09□□□□□ -0.31
NR1H3-225ENST00000494018 MYCP01106 439 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-225ENST00000494018 GRIPAP1Q4V328 841 aa13.09□□□□□ -0.31
NR1H3-225ENST00000494018 PRAMEF18Q5VWM3 479 aa13.09□□□□□ -0.31
NR1H3-225ENST00000494018 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
NR1H3-225ENST00000494018 MPNDQ8N594 471 aa13.09□□□□□ -0.31
NR1H3-225ENST00000494018 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
NR1H3-225ENST00000494018 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
NR1H3-225ENST00000494018 RBBP6Q7Z6E9 1792 aaKnown RBP13.08□□□□□ -0.32
NR1H3-225ENST00000494018 BTBD11A6QL63 1104 aa13.08□□□□□ -0.32
NR1H3-225ENST00000494018 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
NR1H3-225ENST00000494018 SUSD4Q5VX71 490 aa13.08□□□□□ -0.32
NR1H3-225ENST00000494018 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.32
NR1H3-225ENST00000494018 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
NR1H3-225ENST00000494018 NYXQ9GZU5 481 aa13.08□□□□□ -0.32
NR1H3-225ENST00000494018 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.32
NR1H3-225ENST00000494018 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
NR1H3-225ENST00000494018 INTS3Q68E01 1043 aaKnown RBP13.07□□□□□ -0.32
NR1H3-225ENST00000494018 OTOP1Q7RTM1 612 aa13.07□□□□□ -0.32
NR1H3-225ENST00000494018 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
NR1H3-225ENST00000494018 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
NR1H3-225ENST00000494018 KIF4BQ2VIQ3 1234 aa13.06□□□□□ -0.32
NR1H3-225ENST00000494018 RTFDC1Q9BY42 306 aaPredicted RBP13.06□□□□□ -0.32
NR1H3-225ENST00000494018 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
NR1H3-225ENST00000494018 PANK3Q9H999 370 aa13.06□□□□□ -0.32
NR1H3-225ENST00000494018 ABCC4O15439 1325 aa13.06□□□□□ -0.32
NR1H3-225ENST00000494018 KIF7Q2M1P5 1343 aa13.06□□□□□ -0.32
NR1H3-225ENST00000494018 UBN2Q6ZU65 1347 aa13.06□□□□□ -0.32
NR1H3-225ENST00000494018 TM4SF4P48230 202 aa13.05□□□□□ -0.32
NR1H3-225ENST00000494018 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
NR1H3-225ENST00000494018 ANGEL2Q5VTE6 544 aaKnown RBP13.05□□□□□ -0.32
NR1H3-225ENST00000494018 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
NR1H3-225ENST00000494018 TTLL7Q6ZT98 887 aa13.04□□□□□ -0.32
NR1H3-225ENST00000494018 DPF2Q92785 391 aa13.04□□□□□ -0.32
NR1H3-225ENST00000494018 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
NR1H3-225ENST00000494018 UNC80Q8N2C7 3258 aa13.03□□□□□ -0.32
NR1H3-225ENST00000494018 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
NR1H3-225ENST00000494018 PRKG1Q13976 671 aa13.03□□□□□ -0.32
NR1H3-225ENST00000494018 CD99L2Q8TCZ2 262 aa13.03□□□□□ -0.32
NR1H3-225ENST00000494018 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
NR1H3-225ENST00000494018 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
NR1H3-225ENST00000494018 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
NR1H3-225ENST00000494018 NTSR2O95665 410 aa13.02□□□□□ -0.33
NR1H3-225ENST00000494018 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.33
NR1H3-225ENST00000494018 SCARF1Q14162 830 aa13.02□□□□□ -0.33
NR1H3-225ENST00000494018 SP8Q8IXZ3 490 aa13.02□□□□□ -0.33
NR1H3-225ENST00000494018 NLRP3Q96P20 1036 aa13.02□□□□□ -0.33
NR1H3-225ENST00000494018 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
NR1H3-225ENST00000494018 CAP1Q01518 475 aa13.01□□□□□ -0.33
NR1H3-225ENST00000494018 NOM1Q5C9Z4 860 aaKnown RBP13.01□□□□□ -0.33
NR1H3-225ENST00000494018 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
NR1H3-225ENST00000494018 RRP7AQ9Y3A4 280 aaKnown RBP13.01□□□□□ -0.33
NR1H3-225ENST00000494018 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
NR1H3-225ENST00000494018 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
NR1H3-225ENST00000494018 LAMB2P55268 1798 aa13.01□□□□□ -0.33
NR1H3-225ENST00000494018 SCN9AQ15858 1988 aa13□□□□□ -0.33
NR1H3-225ENST00000494018 WTIPA6NIX2 430 aaPredicted RBP13□□□□□ -0.33
NR1H3-225ENST00000494018 MYL6BP14649 208 aa13□□□□□ -0.33
NR1H3-225ENST00000494018 WASHC4Q2M389 1173 aa13□□□□□ -0.33
NR1H3-225ENST00000494018 SLC4A8Q2Y0W8 1093 aa13□□□□□ -0.33
NR1H3-225ENST00000494018 DPF3Q92784 378 aa13□□□□□ -0.33
NR1H3-225ENST00000494018 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
NR1H3-225ENST00000494018 ECE2O60344 883 aa12.99□□□□□ -0.33
NR1H3-225ENST00000494018 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
NR1H3-225ENST00000494018 SREBF2Q12772 1141 aa12.99□□□□□ -0.33
NR1H3-225ENST00000494018 ARMC5Q96C12 935 aa12.99□□□□□ -0.33
NR1H3-225ENST00000494018 COL25A1Q9BXS0 654 aaPredicted RBP12.99□□□□□ -0.33
NR1H3-225ENST00000494018 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
NR1H3-225ENST00000494018 FZD1Q9UP38 647 aa12.99□□□□□ -0.33
NR1H3-225ENST00000494018 PITPNM2Q9BZ72 1349 aa12.98□□□□□ -0.33
NR1H3-225ENST00000494018 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
NR1H3-225ENST00000494018 C6orf229H3BNL8 230 aa12.98□□□□□ -0.33
NR1H3-225ENST00000494018 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
NR1H3-225ENST00000494018 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
NR1H3-225ENST00000494018 FKBP1BP68106 108 aa12.98□□□□□ -0.33
NR1H3-225ENST00000494018 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
NR1H3-225ENST00000494018 KIF6Q6ZMV9 814 aa12.98□□□□□ -0.33
NR1H3-225ENST00000494018 BBOX1O75936 387 aa12.97□□□□□ -0.33
NR1H3-225ENST00000494018 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
NR1H3-225ENST00000494018 MCM10Q7L590 875 aa12.97□□□□□ -0.33
NR1H3-225ENST00000494018 GAS2L2Q8NHY3 880 aa12.97□□□□□ -0.33
NR1H3-225ENST00000494018 EFCC1Q9HA90 598 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms