RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 PI16Q6UXB8 463 aa9.65□□□□□ -0.87
SMC2-205ENST00000493955 PGBD3Q8N328 593 aa9.65□□□□□ -0.87
SMC2-205ENST00000493955 TGIF2Q9GZN2 237 aa9.65□□□□□ -0.87
SMC2-205ENST00000493955 C12orf49Q9H741 205 aa9.65□□□□□ -0.87
SMC2-205ENST00000493955 DYRK1BQ9Y463 629 aa9.65□□□□□ -0.87
SMC2-205ENST00000493955 IRS1P35568 1242 aa9.64□□□□□ -0.87
SMC2-205ENST00000493955 NFX1Q12986 1120 aaKnown RBP9.64□□□□□ -0.87
SMC2-205ENST00000493955 SAMD5Q5TGI4 173 aa9.64□□□□□ -0.87
SMC2-205ENST00000493955 NLRP8Q86W28 1048 aa9.64□□□□□ -0.87
SMC2-205ENST00000493955 EPS8L3Q8TE67 593 aaKnown RBP9.64□□□□□ -0.87
SMC2-205ENST00000493955 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
SMC2-205ENST00000493955 BRD7Q9NPI1 651 aa9.64□□□□□ -0.87
SMC2-205ENST00000493955 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
SMC2-205ENST00000493955 EGFRP00533 1210 aa9.63□□□□□ -0.87
SMC2-205ENST00000493955 F11P03951 625 aa9.63□□□□□ -0.87
SMC2-205ENST00000493955 TRIM46Q7Z4K8 759 aa9.63□□□□□ -0.87
SMC2-205ENST00000493955 OSBPL7Q9BZF2 842 aa9.63□□□□□ -0.87
SMC2-205ENST00000493955 CCSER2Q9H7U1 834 aa9.63□□□□□ -0.87
SMC2-205ENST00000493955 NPHS2Q9NP85 383 aa9.63□□□□□ -0.87
SMC2-205ENST00000493955 INSM1Q01101 510 aaPredicted RBP9.62□□□□□ -0.87
SMC2-205ENST00000493955 ABI2Q9NYB9 513 aaPredicted RBP9.62□□□□□ -0.87
SMC2-205ENST00000493955 WIPF1O43516 503 aa9.61□□□□□ -0.87
SMC2-205ENST00000493955 CTC1Q2NKJ3 1217 aa9.61□□□□□ -0.87
SMC2-205ENST00000493955 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
SMC2-205ENST00000493955 SRCIN1Q9C0H9 1055 aa9.61□□□□□ -0.87
SMC2-205ENST00000493955 CHRDQ9H2X0 955 aa9.61□□□□□ -0.87
SMC2-205ENST00000493955 FAM8A1Q9UBU6 413 aa9.61□□□□□ -0.87
SMC2-205ENST00000493955 DNMT3LQ9UJW3 386 aa9.61□□□□□ -0.87
SMC2-205ENST00000493955 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
SMC2-205ENST00000493955 EFHC2Q5JST6 749 aa9.6□□□□□ -0.87
SMC2-205ENST00000493955 GALNT12Q8IXK2 581 aa9.6□□□□□ -0.87
SMC2-205ENST00000493955 ZFP42Q96MM3 310 aa9.6□□□□□ -0.87
SMC2-205ENST00000493955 GAS2L1Q99501 681 aaPredicted RBP9.6□□□□□ -0.87
SMC2-205ENST00000493955 EREGO14944 169 aa9.59□□□□□ -0.87
SMC2-205ENST00000493955 POLR3DP05423 398 aaPredicted RBP9.59□□□□□ -0.87
SMC2-205ENST00000493955 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.59□□□□□ -0.87
SMC2-205ENST00000493955 C1orf127Q8N9H9 656 aa9.59□□□□□ -0.87
SMC2-205ENST00000493955 PMEPA1Q969W9 287 aa9.59□□□□□ -0.87
SMC2-205ENST00000493955 TINF2Q9BSI4 451 aa9.59□□□□□ -0.87
SMC2-205ENST00000493955 CNTN3Q9P232 1028 aa9.59□□□□□ -0.87
SMC2-205ENST00000493955 KCNQ4P56696 695 aa9.58□□□□□ -0.88
SMC2-205ENST00000493955 LBRQ14739 615 aaKnown RBP9.58□□□□□ -0.88
SMC2-205ENST00000493955 UBXN4Q92575 508 aa9.58□□□□□ -0.88
SMC2-205ENST00000493955 ZCCHC2Q9C0B9 1178 aaKnown RBP9.58□□□□□ -0.88
SMC2-205ENST00000493955 USP31Q70CQ4 1352 aa9.57□□□□□ -0.88
SMC2-205ENST00000493955 GADD45BO75293 160 aaPredicted RBP9.57□□□□□ -0.88
SMC2-205ENST00000493955 USP17L7P0C7H9 530 aa9.57□□□□□ -0.88
SMC2-205ENST00000493955 TTC39BQ5VTQ0 682 aaPredicted RBP9.57□□□□□ -0.88
SMC2-205ENST00000493955 HS2ST1Q7LGA3 356 aa9.57□□□□□ -0.88
SMC2-205ENST00000493955 BCO2Q9BYV7 579 aa9.57□□□□□ -0.88
SMC2-205ENST00000493955 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.57□□□□□ -0.88
SMC2-205ENST00000493955 FAM157BP0CG42 384 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 CES1P23141 567 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 VEGFBP49765 207 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 PTPN12Q05209 780 aaKnown RBP9.56□□□□□ -0.88
SMC2-205ENST00000493955 TAF1CQ15572 869 aaPredicted RBP9.56□□□□□ -0.88
SMC2-205ENST00000493955 MEI1Q5TIA1 1274 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 FIGNL1Q6PIW4 674 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 NXPE4Q6UWF7 544 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 ACBD3Q9H3P7 528 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 CAPN10Q9HC96 672 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 PPP1R1BQ9UD71 204 aaPredicted RBP9.56□□□□□ -0.88
SMC2-205ENST00000493955 KCNH4Q9UQ05 1017 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 ST13P50502 369 aaKnown RBP9.56□□□□□ -0.88
SMC2-205ENST00000493955 SUV39H2Q9H5I1 410 aa9.56□□□□□ -0.88
SMC2-205ENST00000493955 ATXN7O15265 892 aaPredicted RBP9.55□□□□□ -0.88
SMC2-205ENST00000493955 EFSO43281 561 aa9.55□□□□□ -0.88
SMC2-205ENST00000493955 MAN1A2O60476 641 aa9.55□□□□□ -0.88
SMC2-205ENST00000493955 GNL2Q13823 731 aaKnown RBP9.55□□□□□ -0.88
SMC2-205ENST00000493955 ZNF394Q53GI3 561 aa9.55□□□□□ -0.88
SMC2-205ENST00000493955 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
SMC2-205ENST00000493955 SLC43A3Q8NBI5 491 aa9.55□□□□□ -0.88
SMC2-205ENST00000493955 DDX41Q9UJV9 622 aaKnown RBP9.55□□□□□ -0.88
SMC2-205ENST00000493955 SASH3O75995 380 aa9.54□□□□□ -0.88
SMC2-205ENST00000493955 EDN3P14138 238 aa9.54□□□□□ -0.88
SMC2-205ENST00000493955 CCINQ13939 588 aa9.54□□□□□ -0.88
SMC2-205ENST00000493955 GRM2Q14416 872 aa9.54□□□□□ -0.88
SMC2-205ENST00000493955 ZNF654Q8IZM8 581 aa9.54□□□□□ -0.88
SMC2-205ENST00000493955 GGT7Q9UJ14 662 aa9.54□□□□□ -0.88
SMC2-205ENST00000493955 PCDHGB7Q9Y5F8 929 aa9.54□□□□□ -0.88
SMC2-205ENST00000493955 GSTT1P30711 240 aa9.53□□□□□ -0.88
SMC2-205ENST00000493955 SFSWAPQ12872 951 aaKnown RBP9.53□□□□□ -0.88
SMC2-205ENST00000493955 LCE2CQ5TA81 110 aa9.53□□□□□ -0.88
SMC2-205ENST00000493955 RIPOR1Q6ZS17 1223 aa9.53□□□□□ -0.88
SMC2-205ENST00000493955 TANGO6Q9C0B7 1094 aa9.53□□□□□ -0.88
SMC2-205ENST00000493955 KANSL3Q9P2N6 904 aa9.53□□□□□ -0.88
SMC2-205ENST00000493955 PCDHGC4Q9Y5F7 938 aa9.53□□□□□ -0.88
SMC2-205ENST00000493955 DCDC2BA2VCK2 349 aa9.52□□□□□ -0.89
SMC2-205ENST00000493955 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
SMC2-205ENST00000493955 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
SMC2-205ENST00000493955 CYP2E1P05181 493 aaPredicted RBP9.52□□□□□ -0.89
SMC2-205ENST00000493955 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
SMC2-205ENST00000493955 TNNI2P48788 182 aa9.52□□□□□ -0.89
SMC2-205ENST00000493955 RACK1P63244 317 aaKnown RBP9.52□□□□□ -0.89
SMC2-205ENST00000493955 KIAA0319Q5VV43 1072 aa9.52□□□□□ -0.89
SMC2-205ENST00000493955 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
SMC2-205ENST00000493955 OR13H1Q8NG92 308 aa9.52□□□□□ -0.89
SMC2-205ENST00000493955 GSX2Q9BZM3 304 aa9.52□□□□□ -0.89
SMC2-205ENST00000493955 TRAK1Q9UPV9 953 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms